Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 AC008498.1-201ENST00000613012 531 ntBASIC1.52□□□□□ -2.17
GTF2A1P52655 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
GTF2A1P52655 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC1.51□□□□□ -2.17
GTF2A1P52655 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
GTF2A1P52655 MIR1294-201ENST00000408503 142 ntBASIC1.51□□□□□ -2.17
GTF2A1P52655 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC1.51□□□□□ -2.17
GTF2A1P52655 AL590383.1-201ENST00000428602 75 ntBASIC1.51□□□□□ -2.17
GTF2A1P52655 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC1.51□□□□□ -2.17
GTF2A1P52655 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC1.51□□□□□ -2.17
GTF2A1P52655 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC1.51□□□□□ -2.17
GTF2A1P52655 MRPS17P3-201ENST00000465453 385 ntBASIC1.51□□□□□ -2.17
GTF2A1P52655 AC092757.1-201ENST00000467293 467 ntBASIC1.51□□□□□ -2.17
GTF2A1P52655 RPL31P58-201ENST00000469001 379 ntBASIC1.51□□□□□ -2.17
GTF2A1P52655 AC093767.1-201ENST00000504523 156 ntBASIC1.51□□□□□ -2.17
GTF2A1P52655 RNA5SP61-201ENST00000516453 100 ntBASIC1.51□□□□□ -2.17
GTF2A1P52655 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC1.51□□□□□ -2.17
GTF2A1P52655 AC084851.1-201ENST00000529105 249 ntBASIC1.51□□□□□ -2.17
GTF2A1P52655 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC1.51□□□□□ -2.17
GTF2A1P52655 AC024595.1-201ENST00000623088 387 ntBASIC1.51□□□□□ -2.17
GTF2A1P52655 ZNF29P-201ENST00000225587 168 ntBASIC1.5□□□□□ -2.17
GTF2A1P52655 TAF9BP2-201ENST00000400856 499 ntBASIC1.5□□□□□ -2.17
GTF2A1P52655 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC1.5□□□□□ -2.17
GTF2A1P52655 RPS15AP5-201ENST00000436276 388 ntBASIC1.5□□□□□ -2.17
GTF2A1P52655 AL049734.2-201ENST00000441066 616 ntBASIC1.5□□□□□ -2.17
GTF2A1P52655 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC1.5□□□□□ -2.17
GTF2A1P52655 AC138853.1-201ENST00000503549 823 ntBASIC1.5□□□□□ -2.17
GTF2A1P52655 AC008526.1-201ENST00000509149 338 ntBASIC1.5□□□□□ -2.17
GTF2A1P52655 AC008549.1-201ENST00000512900 643 ntBASIC1.5□□□□□ -2.17
GTF2A1P52655 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC1.5□□□□□ -2.17
GTF2A1P52655 AC104997.1-201ENST00000519761 717 ntBASIC1.5□□□□□ -2.17
GTF2A1P52655 OR5AK1P-201ENST00000524837 922 ntBASIC1.5□□□□□ -2.17
GTF2A1P52655 AP002748.2-201ENST00000528671 348 ntBASIC1.5□□□□□ -2.17
GTF2A1P52655 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC1.5□□□□□ -2.17
GTF2A1P52655 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.5□□□□□ -2.17
GTF2A1P52655 AC110588.1-201ENST00000559699 137 ntBASIC1.5□□□□□ -2.17
GTF2A1P52655 MIR3126-201ENST00000577443 74 ntBASIC1.5□□□□□ -2.17
GTF2A1P52655 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.5□□□□□ -2.17
GTF2A1P52655 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.5□□□□□ -2.17
GTF2A1P52655 AC068276.1-201ENST00000605793 379 ntBASIC1.5□□□□□ -2.17
GTF2A1P52655 STMN1P1-201ENST00000617809 440 ntBASIC1.5□□□□□ -2.17
GTF2A1P52655 MIR7157-201ENST00000635801 60 ntBASIC1.5□□□□□ -2.17
GTF2A1P52655 ZNF355P-201ENST00000427301 3216 ntBASIC1.49□□□□□ -2.17
GTF2A1P52655 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
GTF2A1P52655 Y_RNA.510-201ENST00000384511 114 ntBASIC1.49□□□□□ -2.17
GTF2A1P52655 SNRPEP2-201ENST00000397592 279 ntBASIC1.49□□□□□ -2.17
GTF2A1P52655 AL589655.1-201ENST00000405398 482 ntBASIC1.49□□□□□ -2.17
GTF2A1P52655 RNU2-41P-201ENST00000410991 178 ntBASIC1.49□□□□□ -2.17
GTF2A1P52655 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC1.49□□□□□ -2.17
GTF2A1P52655 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.49□□□□□ -2.17
GTF2A1P52655 AL606490.8-201ENST00000441624 319 ntBASIC1.49□□□□□ -2.17
GTF2A1P52655 DNAJC19P8-201ENST00000452887 259 ntBASIC1.49□□□□□ -2.17
GTF2A1P52655 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
GTF2A1P52655 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
GTF2A1P52655 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC1.49□□□□□ -2.17
GTF2A1P52655 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
GTF2A1P52655 EMP1-206ENST00000537612 505 ntTSL 3 BASIC1.49□□□□□ -2.17
GTF2A1P52655 AC004217.3-201ENST00000551552 878 ntBASIC1.49□□□□□ -2.17
GTF2A1P52655 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC1.49□□□□□ -2.17
GTF2A1P52655 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC1.49□□□□□ -2.17
GTF2A1P52655 MTND5P29-201ENST00000458676 1807 ntBASIC1.49□□□□□ -2.17
GTF2A1P52655 AC104454.1-201ENST00000421341 1401 ntBASIC1.49□□□□□ -2.17
GTF2A1P52655 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.48□□□□□ -2.17
GTF2A1P52655 RNU1-72P-201ENST00000362976 153 ntBASIC1.48□□□□□ -2.17
GTF2A1P52655 EDDM3CP-201ENST00000415977 425 ntBASIC1.48□□□□□ -2.17
GTF2A1P52655 HMGB1P49-201ENST00000418882 569 ntBASIC1.48□□□□□ -2.17
GTF2A1P52655 AC007098.1-201ENST00000420122 367 ntBASIC1.48□□□□□ -2.17
GTF2A1P52655 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC1.48□□□□□ -2.17
GTF2A1P52655 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC1.48□□□□□ -2.17
GTF2A1P52655 RPL30P9-201ENST00000465586 330 ntBASIC1.48□□□□□ -2.17
GTF2A1P52655 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC1.48□□□□□ -2.17
GTF2A1P52655 AC098591.2-201ENST00000510152 315 ntBASIC1.48□□□□□ -2.17
GTF2A1P52655 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC1.48□□□□□ -2.17
GTF2A1P52655 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC1.48□□□□□ -2.17
GTF2A1P52655 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC1.48□□□□□ -2.17
GTF2A1P52655 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC1.48□□□□□ -2.17
GTF2A1P52655 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC1.48□□□□□ -2.17
GTF2A1P52655 AC079610.2-201ENST00000604818 690 ntBASIC1.48□□□□□ -2.17
GTF2A1P52655 MTND4LP5-201ENST00000605152 292 ntBASIC1.48□□□□□ -2.17
GTF2A1P52655 AC242628.1-201ENST00000606810 391 ntBASIC1.48□□□□□ -2.17
GTF2A1P52655 U4atac.1-201ENST00000618345 95 ntBASIC1.48□□□□□ -2.17
GTF2A1P52655 AL356585.4-201ENST00000623078 1229 ntBASIC1.48□□□□□ -2.17
GTF2A1P52655 AC064859.1-201ENST00000624741 174 ntBASIC1.48□□□□□ -2.17
GTF2A1P52655 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.48□□□□□ -2.17
GTF2A1P52655 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC1.47□□□□□ -2.17
GTF2A1P52655 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
GTF2A1P52655 SNORD51-201ENST00000384320 80 ntBASIC1.47□□□□□ -2.17
GTF2A1P52655 SNORA8-201ENST00000384574 139 ntBASIC1.47□□□□□ -2.17
GTF2A1P52655 BTF3L4P2-201ENST00000392798 346 ntBASIC1.47□□□□□ -2.17
GTF2A1P52655 ATP5F1P6-201ENST00000402768 767 ntBASIC1.47□□□□□ -2.17
GTF2A1P52655 AL356421.1-201ENST00000403255 413 ntBASIC1.47□□□□□ -2.17
GTF2A1P52655 Z86062.1-201ENST00000406773 777 ntBASIC1.47□□□□□ -2.17
GTF2A1P52655 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.47□□□□□ -2.17
GTF2A1P52655 RPL30P13-201ENST00000418873 348 ntBASIC1.47□□□□□ -2.17
GTF2A1P52655 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC1.47□□□□□ -2.17
GTF2A1P52655 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC1.47□□□□□ -2.17
GTF2A1P52655 AC114801.2-201ENST00000503825 781 ntBASIC1.47□□□□□ -2.17
GTF2A1P52655 AC113420.1-201ENST00000507903 571 ntBASIC1.47□□□□□ -2.17
GTF2A1P52655 SNORA31.6-201ENST00000516241 130 ntBASIC1.47□□□□□ -2.17
GTF2A1P52655 MAL2-206ENST00000522187 547 ntTSL 4 BASIC1.47□□□□□ -2.17
GTF2A1P52655 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 165.2 ms