Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 RPL23AP50-201ENST00000434149 455 ntBASIC5.02□□□□□ -1.61
USP11P51784 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC5.02□□□□□ -1.61
USP11P51784 AC099799.1-201ENST00000439809 192 ntBASIC5.02□□□□□ -1.61
USP11P51784 AC073910.1-201ENST00000445047 438 ntBASIC5.02□□□□□ -1.61
USP11P51784 RPL23AP24-201ENST00000458203 385 ntBASIC5.02□□□□□ -1.61
USP11P51784 AC105758.1-201ENST00000506038 399 ntBASIC5.02□□□□□ -1.61
USP11P51784 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC5.02□□□□□ -1.61
USP11P51784 AC096745.1-201ENST00000509945 370 ntBASIC5.02□□□□□ -1.61
USP11P51784 AC025465.3-201ENST00000510570 311 ntBASIC5.02□□□□□ -1.61
USP11P51784 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC5.02□□□□□ -1.61
USP11P51784 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
USP11P51784 RNU6-1023P-201ENST00000516137 106 ntBASIC5.02□□□□□ -1.61
USP11P51784 RNU6-27P-201ENST00000516146 107 ntBASIC5.02□□□□□ -1.61
USP11P51784 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
USP11P51784 IGHV3-76-201ENST00000522465 295 ntBASIC5.02□□□□□ -1.61
USP11P51784 SUB1P3-201ENST00000564581 315 ntBASIC5.02□□□□□ -1.61
USP11P51784 MIR4284-201ENST00000578924 81 ntBASIC5.02□□□□□ -1.61
USP11P51784 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC5.02□□□□□ -1.61
USP11P51784 MIR6864-201ENST00000617935 70 ntBASIC5.02□□□□□ -1.61
USP11P51784 uc_338.13-201ENST00000618243 179 ntBASIC5.02□□□□□ -1.61
USP11P51784 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC5.02□□□□□ -1.61
USP11P51784 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC5.02□□□□□ -1.61
USP11P51784 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
USP11P51784 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
USP11P51784 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
USP11P51784 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC5.02□□□□□ -1.61
USP11P51784 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
USP11P51784 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
USP11P51784 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
USP11P51784 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.01□□□□□ -1.61
USP11P51784 ZNF72P-201ENST00000425869 1908 ntBASIC5.01□□□□□ -1.61
USP11P51784 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC5.01□□□□□ -1.61
USP11P51784 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC5.01□□□□□ -1.61
USP11P51784 Y_RNA.14-201ENST00000362415 103 ntBASIC5.01□□□□□ -1.61
USP11P51784 Y_RNA.117-201ENST00000363294 101 ntBASIC5.01□□□□□ -1.61
USP11P51784 RNU1-20P-201ENST00000363314 162 ntBASIC5.01□□□□□ -1.61
USP11P51784 RNU6-1284P-201ENST00000363701 100 ntBASIC5.01□□□□□ -1.61
USP11P51784 SNORA62-201ENST00000365493 153 ntBASIC5.01□□□□□ -1.61
USP11P51784 SNORD14.1-201ENST00000365609 90 ntBASIC5.01□□□□□ -1.61
USP11P51784 Y_RNA.477-201ENST00000384352 108 ntBASIC5.01□□□□□ -1.61
USP11P51784 RNU6-434P-201ENST00000384376 107 ntBASIC5.01□□□□□ -1.61
USP11P51784 Y_RNA.562-201ENST00000384695 113 ntBASIC5.01□□□□□ -1.61
USP11P51784 RNU6-754P-201ENST00000391166 107 ntBASIC5.01□□□□□ -1.61
USP11P51784 AL109755.1-201ENST00000401791 649 ntBASIC5.01□□□□□ -1.61
USP11P51784 AMMECR1LP1-201ENST00000415152 841 ntBASIC5.01□□□□□ -1.61
USP11P51784 RPS29P17-201ENST00000430795 166 ntBASIC5.01□□□□□ -1.61
USP11P51784 AC011998.1-201ENST00000433403 117 ntBASIC5.01□□□□□ -1.61
USP11P51784 AL132765.1-201ENST00000434165 553 ntBASIC5.01□□□□□ -1.61
USP11P51784 RPL12P46-201ENST00000436610 195 ntBASIC5.01□□□□□ -1.61
USP11P51784 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC5.01□□□□□ -1.61
USP11P51784 AC011816.1-201ENST00000441346 546 ntBASIC5.01□□□□□ -1.61
USP11P51784 FTH1P25-201ENST00000447665 469 ntBASIC5.01□□□□□ -1.61
USP11P51784 TPT1P12-201ENST00000448968 492 ntBASIC5.01□□□□□ -1.61
USP11P51784 RN7SL98P-201ENST00000462271 300 ntBASIC5.01□□□□□ -1.61
USP11P51784 RPS27AP1-201ENST00000475545 471 ntBASIC5.01□□□□□ -1.61
USP11P51784 AC026979.1-201ENST00000492525 396 ntBASIC5.01□□□□□ -1.61
USP11P51784 RN7SL812P-201ENST00000493791 279 ntBASIC5.01□□□□□ -1.61
USP11P51784 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC5.01□□□□□ -1.61
USP11P51784 AC092436.3-201ENST00000511788 257 ntBASIC5.01□□□□□ -1.61
USP11P51784 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC5.01□□□□□ -1.61
USP11P51784 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC5.01□□□□□ -1.61
USP11P51784 AC009643.1-201ENST00000532030 391 ntBASIC5.01□□□□□ -1.61
USP11P51784 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC5.01□□□□□ -1.61
USP11P51784 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC5.01□□□□□ -1.61
USP11P51784 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC5.01□□□□□ -1.61
USP11P51784 RPL23AP97-201ENST00000568955 471 ntBASIC5.01□□□□□ -1.61
USP11P51784 RN7SL176P-201ENST00000580352 264 ntBASIC5.01□□□□□ -1.61
USP11P51784 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC5.01□□□□□ -1.61
USP11P51784 AL451044.1-201ENST00000604867 238 ntBASIC5.01□□□□□ -1.61
USP11P51784 MTND4LP5-201ENST00000605152 292 ntBASIC5.01□□□□□ -1.61
USP11P51784 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
USP11P51784 AC098479.1-201ENST00000609225 154 ntBASIC5.01□□□□□ -1.61
USP11P51784 AL589994.2-201ENST00000621124 579 ntBASIC5.01□□□□□ -1.61
USP11P51784 MIR4272-201ENST00000635924 64 ntBASIC5.01□□□□□ -1.61
USP11P51784 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
USP11P51784 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
USP11P51784 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
USP11P51784 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC5.01□□□□□ -1.61
USP11P51784 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.01□□□□□ -1.61
USP11P51784 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC5.01□□□□□ -1.61
USP11P51784 HSPA8P4-201ENST00000511877 1920 ntBASIC5.01□□□□□ -1.61
USP11P51784 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC5.01□□□□□ -1.61
USP11P51784 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC5.01□□□□□ -1.61
USP11P51784 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC5.01□□□□□ -1.61
USP11P51784 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC5.01□□□□□ -1.61
USP11P51784 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC5□□□□□ -1.61
USP11P51784 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC5□□□□□ -1.61
USP11P51784 PHKBP1-201ENST00000450951 1951 ntBASIC5□□□□□ -1.61
USP11P51784 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC5□□□□□ -1.61
USP11P51784 AC139713.2-215ENST00000641428 5037 ntBASIC5□□□□□ -1.61
USP11P51784 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
USP11P51784 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
USP11P51784 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC5□□□□□ -1.61
USP11P51784 RNU6-806P-201ENST00000365147 105 ntBASIC5□□□□□ -1.61
USP11P51784 RNA5SP372-201ENST00000390836 115 ntBASIC5□□□□□ -1.61
USP11P51784 AC097374.1-203ENST00000400783 485 ntBASIC5□□□□□ -1.61
USP11P51784 MIR1302-6-201ENST00000408466 90 ntBASIC5□□□□□ -1.61
USP11P51784 RPL18P10-201ENST00000425606 538 ntBASIC5□□□□□ -1.61
USP11P51784 RPL35AP22-201ENST00000436855 335 ntBASIC5□□□□□ -1.61
USP11P51784 AL359672.1-201ENST00000442302 409 ntBASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms