Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC3.12□□□□□ -1.91
LHX1P48742 BX664608.1-201ENST00000610519 487 ntBASIC3.12□□□□□ -1.91
LHX1P48742 AL158063.1-201ENST00000615349 536 ntBASIC3.12□□□□□ -1.91
LHX1P48742 uc_338.12-201ENST00000616344 181 ntBASIC3.12□□□□□ -1.91
LHX1P48742 MIR6076-201ENST00000617521 113 ntBASIC3.12□□□□□ -1.91
LHX1P48742 SNHG22-203ENST00000617833 660 ntBASIC3.12□□□□□ -1.91
LHX1P48742 AC091953.2-201ENST00000623979 160 ntBASIC3.12□□□□□ -1.91
LHX1P48742 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.12□□□□□ -1.91
LHX1P48742 AL137790.1-201ENST00000634283 177 ntBASIC3.12□□□□□ -1.91
LHX1P48742 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.12□□□□□ -1.91
LHX1P48742 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.12□□□□□ -1.91
LHX1P48742 AL079305.1-201ENST00000623159 3008 ntBASIC3.11□□□□□ -1.91
LHX1P48742 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
LHX1P48742 AC092104.1-201ENST00000497346 1441 ntBASIC3.11□□□□□ -1.91
LHX1P48742 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.11□□□□□ -1.91
LHX1P48742 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
LHX1P48742 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
LHX1P48742 FGF7P2-201ENST00000332473 296 ntBASIC3.11□□□□□ -1.91
LHX1P48742 RNU4-91P-201ENST00000364778 135 ntBASIC3.11□□□□□ -1.91
LHX1P48742 SNORA1.3-201ENST00000384676 136 ntBASIC3.11□□□□□ -1.91
LHX1P48742 MRPL42P2-201ENST00000403169 426 ntBASIC3.11□□□□□ -1.91
LHX1P48742 SPA17P1-201ENST00000416656 452 ntBASIC3.11□□□□□ -1.91
LHX1P48742 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC3.11□□□□□ -1.91
LHX1P48742 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC3.11□□□□□ -1.91
LHX1P48742 RPS20P5-201ENST00000434808 360 ntBASIC3.11□□□□□ -1.91
LHX1P48742 MTND1P28-201ENST00000435623 950 ntBASIC3.11□□□□□ -1.91
LHX1P48742 TAAR7P-201ENST00000436141 242 ntBASIC3.11□□□□□ -1.91
LHX1P48742 HMGN2P20-201ENST00000437531 273 ntBASIC3.11□□□□□ -1.91
LHX1P48742 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.11□□□□□ -1.91
LHX1P48742 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.11□□□□□ -1.91
LHX1P48742 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC3.11□□□□□ -1.91
LHX1P48742 RNA5SP269-201ENST00000459032 137 ntBASIC3.11□□□□□ -1.91
LHX1P48742 RPS29P26-201ENST00000477483 171 ntBASIC3.11□□□□□ -1.91
LHX1P48742 RPL30P5-201ENST00000494923 336 ntBASIC3.11□□□□□ -1.91
LHX1P48742 AC091965.2-201ENST00000512324 613 ntBASIC3.11□□□□□ -1.91
LHX1P48742 RN7SKP43-201ENST00000516173 320 ntBASIC3.11□□□□□ -1.91
LHX1P48742 NRON-201ENST00000517270 370 ntBASIC3.11□□□□□ -1.91
LHX1P48742 AP003467.2-201ENST00000520175 319 ntBASIC3.11□□□□□ -1.91
LHX1P48742 AC245166.1-201ENST00000521012 253 ntBASIC3.11□□□□□ -1.91
LHX1P48742 AC100870.1-201ENST00000522035 505 ntBASIC3.11□□□□□ -1.91
LHX1P48742 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.11□□□□□ -1.91
LHX1P48742 AC007115.1-201ENST00000546853 234 ntBASIC3.11□□□□□ -1.91
LHX1P48742 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.11□□□□□ -1.91
LHX1P48742 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC3.11□□□□□ -1.91
LHX1P48742 MIR3118-1-201ENST00000581787 76 ntBASIC3.11□□□□□ -1.91
LHX1P48742 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
LHX1P48742 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC3.11□□□□□ -1.91
LHX1P48742 AC015871.2-201ENST00000603605 948 ntBASIC3.11□□□□□ -1.91
LHX1P48742 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.11□□□□□ -1.91
LHX1P48742 AC108479.2-201ENST00000617314 601 ntBASIC3.11□□□□□ -1.91
LHX1P48742 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.11□□□□□ -1.91
LHX1P48742 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
LHX1P48742 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
LHX1P48742 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
LHX1P48742 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.1□□□□□ -1.91
LHX1P48742 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.1□□□□□ -1.91
LHX1P48742 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
LHX1P48742 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.1□□□□□ -1.91
LHX1P48742 RNU6-7-201ENST00000364784 107 ntBASIC3.1□□□□□ -1.91
LHX1P48742 RNU6-8-201ENST00000365467 107 ntBASIC3.1□□□□□ -1.91
LHX1P48742 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
LHX1P48742 AL359634.1-202ENST00000404721 284 ntBASIC3.1□□□□□ -1.91
LHX1P48742 RN7SKP142-201ENST00000411236 328 ntBASIC3.1□□□□□ -1.91
LHX1P48742 AL451054.2-201ENST00000420896 202 ntBASIC3.1□□□□□ -1.91
LHX1P48742 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC3.1□□□□□ -1.91
LHX1P48742 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.1□□□□□ -1.91
LHX1P48742 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.1□□□□□ -1.91
LHX1P48742 TAF9P1-201ENST00000445421 515 ntBASIC3.1□□□□□ -1.91
LHX1P48742 AL590664.1-201ENST00000448065 339 ntBASIC3.1□□□□□ -1.91
LHX1P48742 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.1□□□□□ -1.91
LHX1P48742 TAF9P2-201ENST00000454958 515 ntBASIC3.1□□□□□ -1.91
LHX1P48742 RPL30P14-201ENST00000482744 348 ntBASIC3.1□□□□□ -1.91
LHX1P48742 TTC39CP1-201ENST00000512513 755 ntBASIC3.1□□□□□ -1.91
LHX1P48742 Y_RNA.695-201ENST00000516715 107 ntBASIC3.1□□□□□ -1.91
LHX1P48742 RNA5SP380-201ENST00000517190 98 ntBASIC3.1□□□□□ -1.91
LHX1P48742 AC068657.1-201ENST00000520807 306 ntBASIC3.1□□□□□ -1.91
LHX1P48742 CASP1P1-201ENST00000526345 212 ntBASIC3.1□□□□□ -1.91
LHX1P48742 AP003181.2-201ENST00000528941 181 ntBASIC3.1□□□□□ -1.91
LHX1P48742 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.1□□□□□ -1.91
LHX1P48742 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.1□□□□□ -1.91
LHX1P48742 RPL21P5-201ENST00000554662 472 ntBASIC3.1□□□□□ -1.91
LHX1P48742 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.1□□□□□ -1.91
LHX1P48742 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.1□□□□□ -1.91
LHX1P48742 MIR4293-201ENST00000584305 78 ntBASIC3.1□□□□□ -1.91
LHX1P48742 AC009977.1-201ENST00000586015 570 ntBASIC3.1□□□□□ -1.91
LHX1P48742 AC002545.1-201ENST00000592511 181 ntBASIC3.1□□□□□ -1.91
LHX1P48742 AC025594.3-201ENST00000613068 790 ntBASIC3.1□□□□□ -1.91
LHX1P48742 AC006111.3-201ENST00000622137 383 ntBASIC3.1□□□□□ -1.91
LHX1P48742 AC027309.3-201ENST00000623419 351 ntBASIC3.1□□□□□ -1.91
LHX1P48742 AC006386.2-201ENST00000624491 75 ntBASIC3.1□□□□□ -1.91
LHX1P48742 AC012005.1-201ENST00000624575 75 ntBASIC3.1□□□□□ -1.91
LHX1P48742 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
LHX1P48742 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.1□□□□□ -1.91
LHX1P48742 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
LHX1P48742 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
LHX1P48742 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.09□□□□□ -1.91
LHX1P48742 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
LHX1P48742 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
LHX1P48742 U3.26-201ENST00000391236 204 ntBASIC3.09□□□□□ -1.91
LHX1P48742 AL513331.1-201ENST00000411908 397 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms