Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
TM4SF4P48230 RNU6-39P-201ENST00000384344 107 ntBASIC3.94□□□□□ -1.78
TM4SF4P48230 U3.39-201ENST00000408569 239 ntBASIC3.94□□□□□ -1.78
TM4SF4P48230 U3.42-201ENST00000408746 214 ntBASIC3.94□□□□□ -1.78
TM4SF4P48230 RNU4-55P-201ENST00000410731 137 ntBASIC3.94□□□□□ -1.78
TM4SF4P48230 ZNF90P2-204ENST00000419323 1075 ntBASIC3.94□□□□□ -1.78
TM4SF4P48230 RPL35AP12-201ENST00000425362 338 ntBASIC3.94□□□□□ -1.78
TM4SF4P48230 OR2B8P-201ENST00000432841 938 ntBASIC3.94□□□□□ -1.78
TM4SF4P48230 SETP5-201ENST00000437270 562 ntBASIC3.94□□□□□ -1.78
TM4SF4P48230 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC3.94□□□□□ -1.78
TM4SF4P48230 GAPDHP27-201ENST00000447427 1020 ntBASIC3.94□□□□□ -1.78
TM4SF4P48230 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC3.94□□□□□ -1.78
TM4SF4P48230 MTND2P33-201ENST00000506452 1031 ntBASIC3.94□□□□□ -1.78
TM4SF4P48230 AC108078.1-201ENST00000508073 725 ntBASIC3.94□□□□□ -1.78
TM4SF4P48230 AC091133.4-201ENST00000511142 308 ntBASIC3.94□□□□□ -1.78
TM4SF4P48230 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC3.94□□□□□ -1.78
TM4SF4P48230 SCARNA24.1-201ENST00000516465 137 ntBASIC3.94□□□□□ -1.78
TM4SF4P48230 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC3.94□□□□□ -1.78
TM4SF4P48230 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC3.94□□□□□ -1.78
TM4SF4P48230 MYL12AP1-201ENST00000518490 515 ntBASIC3.94□□□□□ -1.78
TM4SF4P48230 OR5G4P-201ENST00000525251 760 ntBASIC3.94□□□□□ -1.78
TM4SF4P48230 AP003072.2-201ENST00000527756 676 ntBASIC3.94□□□□□ -1.78
TM4SF4P48230 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
TM4SF4P48230 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
TM4SF4P48230 AC068790.6-201ENST00000602558 258 ntBASIC3.94□□□□□ -1.78
TM4SF4P48230 AC007684.1-201ENST00000609671 477 ntBASIC3.94□□□□□ -1.78
TM4SF4P48230 MIR6715A-201ENST00000615929 79 ntBASIC3.94□□□□□ -1.78
TM4SF4P48230 AL158209.2-201ENST00000619266 216 ntBASIC3.94□□□□□ -1.78
TM4SF4P48230 AL732372.2-225ENST00000642124 456 ntBASIC3.94□□□□□ -1.78
TM4SF4P48230 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
TM4SF4P48230 LINC02471-203ENST00000641941 4752 ntBASIC3.94□□□□□ -1.78
TM4SF4P48230 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
TM4SF4P48230 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
TM4SF4P48230 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
TM4SF4P48230 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
TM4SF4P48230 RN7SKP226-201ENST00000364912 300 ntBASIC3.93□□□□□ -1.78
TM4SF4P48230 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
TM4SF4P48230 SNORA1.3-201ENST00000384676 136 ntBASIC3.93□□□□□ -1.78
TM4SF4P48230 RPS4XP3-201ENST00000398541 413 ntBASIC3.93□□□□□ -1.78
TM4SF4P48230 AC063979.1-201ENST00000415539 377 ntBASIC3.93□□□□□ -1.78
TM4SF4P48230 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.93□□□□□ -1.78
TM4SF4P48230 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC3.93□□□□□ -1.78
TM4SF4P48230 AC092573.2-201ENST00000434546 243 ntBASIC3.93□□□□□ -1.78
TM4SF4P48230 RPS20P5-201ENST00000434808 360 ntBASIC3.93□□□□□ -1.78
TM4SF4P48230 AL451074.3-201ENST00000437709 472 ntBASIC3.93□□□□□ -1.78
TM4SF4P48230 MTND4P25-201ENST00000441039 533 ntBASIC3.93□□□□□ -1.78
TM4SF4P48230 ATP5C1P1-201ENST00000441945 895 ntBASIC3.93□□□□□ -1.78
TM4SF4P48230 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.93□□□□□ -1.78
TM4SF4P48230 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.93□□□□□ -1.78
TM4SF4P48230 FABP5P13-201ENST00000452144 328 ntBASIC3.93□□□□□ -1.78
TM4SF4P48230 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC3.93□□□□□ -1.78
TM4SF4P48230 RN7SL594P-201ENST00000470590 287 ntBASIC3.93□□□□□ -1.78
TM4SF4P48230 AC090572.1-201ENST00000519251 160 ntBASIC3.93□□□□□ -1.78
TM4SF4P48230 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.93□□□□□ -1.78
TM4SF4P48230 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC3.93□□□□□ -1.78
TM4SF4P48230 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.93□□□□□ -1.78
TM4SF4P48230 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.93□□□□□ -1.78
TM4SF4P48230 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.93□□□□□ -1.78
TM4SF4P48230 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.93□□□□□ -1.78
TM4SF4P48230 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.93□□□□□ -1.78
TM4SF4P48230 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC3.93□□□□□ -1.78
TM4SF4P48230 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.93□□□□□ -1.78
TM4SF4P48230 MTND6P33-201ENST00000571794 183 ntBASIC3.93□□□□□ -1.78
TM4SF4P48230 AC104763.2-201ENST00000604179 382 ntBASIC3.93□□□□□ -1.78
TM4SF4P48230 AC008962.1-201ENST00000605729 304 ntBASIC3.93□□□□□ -1.78
TM4SF4P48230 AC009570.1-201ENST00000609599 745 ntBASIC3.93□□□□□ -1.78
TM4SF4P48230 AC090132.2-201ENST00000615881 347 ntBASIC3.93□□□□□ -1.78
TM4SF4P48230 AC009161.2-201ENST00000624626 138 ntBASIC3.93□□□□□ -1.78
TM4SF4P48230 AL136164.4-201ENST00000625013 2135 ntBASIC3.93□□□□□ -1.78
TM4SF4P48230 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.93□□□□□ -1.78
TM4SF4P48230 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC3.93□□□□□ -1.78
TM4SF4P48230 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.93□□□□□ -1.78
TM4SF4P48230 AC007785.2-201ENST00000598627 1916 ntBASIC3.93□□□□□ -1.78
TM4SF4P48230 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.93□□□□□ -1.78
TM4SF4P48230 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.92□□□□□ -1.78
TM4SF4P48230 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.92□□□□□ -1.78
TM4SF4P48230 TNPO1P3-201ENST00000436471 2662 ntBASIC3.92□□□□□ -1.78
TM4SF4P48230 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC3.92□□□□□ -1.78
TM4SF4P48230 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
TM4SF4P48230 Y_RNA.1-201ENST00000352915 104 ntBASIC3.92□□□□□ -1.78
TM4SF4P48230 RNU6-282P-201ENST00000365357 103 ntBASIC3.92□□□□□ -1.78
TM4SF4P48230 RNU6-190P-201ENST00000384154 102 ntBASIC3.92□□□□□ -1.78
TM4SF4P48230 RNU6-1215P-201ENST00000384441 102 ntBASIC3.92□□□□□ -1.78
TM4SF4P48230 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
TM4SF4P48230 RNU6-817P-201ENST00000391083 104 ntBASIC3.92□□□□□ -1.78
TM4SF4P48230 AC007390.1-201ENST00000415722 356 ntBASIC3.92□□□□□ -1.78
TM4SF4P48230 AL159169.1-201ENST00000421119 127 ntBASIC3.92□□□□□ -1.78
TM4SF4P48230 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.92□□□□□ -1.78
TM4SF4P48230 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.92□□□□□ -1.78
TM4SF4P48230 MTCO2P11-201ENST00000431069 680 ntBASIC3.92□□□□□ -1.78
TM4SF4P48230 AL512844.2-201ENST00000433990 593 ntBASIC3.92□□□□□ -1.78
TM4SF4P48230 HMGB3P12-201ENST00000438745 556 ntBASIC3.92□□□□□ -1.78
TM4SF4P48230 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.92□□□□□ -1.78
TM4SF4P48230 AC132479.1-201ENST00000449160 144 ntBASIC3.92□□□□□ -1.78
TM4SF4P48230 RPL30P14-201ENST00000482744 348 ntBASIC3.92□□□□□ -1.78
TM4SF4P48230 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC3.92□□□□□ -1.78
TM4SF4P48230 AL160314.1-201ENST00000490836 438 ntBASIC3.92□□□□□ -1.78
TM4SF4P48230 RPL7P47-201ENST00000497299 556 ntBASIC3.92□□□□□ -1.78
TM4SF4P48230 LAMTOR3P2-201ENST00000504479 232 ntBASIC3.92□□□□□ -1.78
TM4SF4P48230 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms