Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 AC034102.8-201ENST00000615146 484 ntBASIC2.92□□□□□ -1.94
NKX2-1P43699 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC2.92□□□□□ -1.94
NKX2-1P43699 uc_338.11-201ENST00000619132 160 ntBASIC2.92□□□□□ -1.94
NKX2-1P43699 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.92□□□□□ -1.94
NKX2-1P43699 OR5H6-203ENST00000642105 978 ntBASIC2.92□□□□□ -1.94
NKX2-1P43699 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC2.92□□□□□ -1.94
NKX2-1P43699 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.92□□□□□ -1.94
NKX2-1P43699 AC007496.3-201ENST00000624987 3443 ntBASIC2.92□□□□□ -1.94
NKX2-1P43699 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
NKX2-1P43699 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
NKX2-1P43699 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
NKX2-1P43699 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC2.91□□□□□ -1.94
NKX2-1P43699 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
NKX2-1P43699 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
NKX2-1P43699 AC027514.1-201ENST00000588561 1603 ntBASIC2.91□□□□□ -1.94
NKX2-1P43699 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
NKX2-1P43699 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.91□□□□□ -1.94
NKX2-1P43699 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC2.91□□□□□ -1.94
NKX2-1P43699 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
NKX2-1P43699 Y_RNA.9-201ENST00000362354 101 ntBASIC2.91□□□□□ -1.94
NKX2-1P43699 ACEA_U3.1-201ENST00000363057 217 ntBASIC2.91□□□□□ -1.94
NKX2-1P43699 RNY4P14-201ENST00000363656 96 ntBASIC2.91□□□□□ -1.94
NKX2-1P43699 SNORA70.2-201ENST00000364506 135 ntBASIC2.91□□□□□ -1.94
NKX2-1P43699 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
NKX2-1P43699 RNU6-817P-201ENST00000391083 104 ntBASIC2.91□□□□□ -1.94
NKX2-1P43699 CALM2P3-201ENST00000400429 449 ntBASIC2.91□□□□□ -1.94
NKX2-1P43699 Y_RNA.625-201ENST00000411256 107 ntBASIC2.91□□□□□ -1.94
NKX2-1P43699 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC2.91□□□□□ -1.94
NKX2-1P43699 AC245291.1-201ENST00000419501 328 ntBASIC2.91□□□□□ -1.94
NKX2-1P43699 AC091390.3-201ENST00000426478 338 ntBASIC2.91□□□□□ -1.94
NKX2-1P43699 DPPA2P1-201ENST00000428060 556 ntBASIC2.91□□□□□ -1.94
NKX2-1P43699 AC000111.3-201ENST00000433478 193 ntBASIC2.91□□□□□ -1.94
NKX2-1P43699 RPS20P5-201ENST00000434808 360 ntBASIC2.91□□□□□ -1.94
NKX2-1P43699 AC002486.1-201ENST00000435098 391 ntBASIC2.91□□□□□ -1.94
NKX2-1P43699 BNIP3P2-201ENST00000441221 577 ntBASIC2.91□□□□□ -1.94
NKX2-1P43699 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC2.91□□□□□ -1.94
NKX2-1P43699 HSFY6P-201ENST00000445573 403 ntBASIC2.91□□□□□ -1.94
NKX2-1P43699 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC2.91□□□□□ -1.94
NKX2-1P43699 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC2.91□□□□□ -1.94
NKX2-1P43699 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC2.91□□□□□ -1.94
NKX2-1P43699 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC2.91□□□□□ -1.94
NKX2-1P43699 HMGN1P18-201ENST00000457642 277 ntBASIC2.91□□□□□ -1.94
NKX2-1P43699 TAF8-207ENST00000482432 556 ntTSL 2 BASIC2.91□□□□□ -1.94
NKX2-1P43699 HSPD1P15-201ENST00000505573 1122 ntBASIC2.91□□□□□ -1.94
NKX2-1P43699 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC2.91□□□□□ -1.94
NKX2-1P43699 TTC39CP1-201ENST00000512513 755 ntBASIC2.91□□□□□ -1.94
NKX2-1P43699 SCARNA24.1-201ENST00000516465 137 ntBASIC2.91□□□□□ -1.94
NKX2-1P43699 RNU6-1092P-201ENST00000516955 87 ntBASIC2.91□□□□□ -1.94
NKX2-1P43699 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.91□□□□□ -1.94
NKX2-1P43699 MTND4LP26-201ENST00000518144 282 ntBASIC2.91□□□□□ -1.94
NKX2-1P43699 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC2.91□□□□□ -1.94
NKX2-1P43699 AC026333.2-201ENST00000542164 106 ntBASIC2.91□□□□□ -1.94
NKX2-1P43699 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.91□□□□□ -1.94
NKX2-1P43699 AL163153.1-201ENST00000554223 283 ntBASIC2.91□□□□□ -1.94
NKX2-1P43699 AC120057.2-201ENST00000571520 271 ntBASIC2.91□□□□□ -1.94
NKX2-1P43699 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC2.91□□□□□ -1.94
NKX2-1P43699 AC126118.1-201ENST00000607744 628 ntBASIC2.91□□□□□ -1.94
NKX2-1P43699 AF250324.2-201ENST00000608299 610 ntBASIC2.91□□□□□ -1.94
NKX2-1P43699 AC092954.2-201ENST00000609103 430 ntBASIC2.91□□□□□ -1.94
NKX2-1P43699 AC007998.5-201ENST00000622938 237 ntBASIC2.91□□□□□ -1.94
NKX2-1P43699 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.91□□□□□ -1.94
NKX2-1P43699 SEPT14P19-203ENST00000633205 211 ntBASIC2.91□□□□□ -1.94
NKX2-1P43699 MIR6863-201ENST00000636112 90 ntBASIC2.91□□□□□ -1.94
NKX2-1P43699 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
NKX2-1P43699 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC2.91□□□□□ -1.94
NKX2-1P43699 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
NKX2-1P43699 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC2.91□□□□□ -1.94
NKX2-1P43699 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
NKX2-1P43699 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
NKX2-1P43699 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC2.9□□□□□ -1.94
NKX2-1P43699 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.9□□□□□ -1.94
NKX2-1P43699 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
NKX2-1P43699 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
NKX2-1P43699 NDUFS5P1-201ENST00000405668 289 ntBASIC2.9□□□□□ -1.95
NKX2-1P43699 SNORA3.3-201ENST00000408712 125 ntBASIC2.9□□□□□ -1.95
NKX2-1P43699 RNA5SP317-201ENST00000410176 116 ntBASIC2.9□□□□□ -1.95
NKX2-1P43699 RNA5SP38-201ENST00000410750 119 ntBASIC2.9□□□□□ -1.95
NKX2-1P43699 RNA5SP311-201ENST00000411290 116 ntBASIC2.9□□□□□ -1.95
NKX2-1P43699 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.9□□□□□ -1.95
NKX2-1P43699 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC2.9□□□□□ -1.95
NKX2-1P43699 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC2.9□□□□□ -1.95
NKX2-1P43699 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC2.9□□□□□ -1.95
NKX2-1P43699 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.9□□□□□ -1.95
NKX2-1P43699 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC2.9□□□□□ -1.95
NKX2-1P43699 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC2.9□□□□□ -1.95
NKX2-1P43699 FCF1P1-201ENST00000432690 571 ntBASIC2.9□□□□□ -1.95
NKX2-1P43699 AL512844.2-201ENST00000433990 593 ntBASIC2.9□□□□□ -1.95
NKX2-1P43699 AC092573.2-201ENST00000434546 243 ntBASIC2.9□□□□□ -1.95
NKX2-1P43699 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.9□□□□□ -1.95
NKX2-1P43699 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.9□□□□□ -1.95
NKX2-1P43699 AC125238.1-201ENST00000448842 249 ntBASIC2.9□□□□□ -1.95
NKX2-1P43699 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC2.9□□□□□ -1.95
NKX2-1P43699 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC2.9□□□□□ -1.95
NKX2-1P43699 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.9□□□□□ -1.95
NKX2-1P43699 RPL23AP67-201ENST00000465341 474 ntBASIC2.9□□□□□ -1.95
NKX2-1P43699 GMFBP1-201ENST00000467831 427 ntBASIC2.9□□□□□ -1.95
NKX2-1P43699 HMGN2P13-201ENST00000476476 274 ntBASIC2.9□□□□□ -1.95
NKX2-1P43699 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.9□□□□□ -1.95
NKX2-1P43699 RPS3AP14-201ENST00000483907 780 ntBASIC2.9□□□□□ -1.95
NKX2-1P43699 AC079382.1-201ENST00000493346 557 ntBASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 161 ms