Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.75□□□□□ -1.81
CIITAP33076 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.75□□□□□ -1.81
CIITAP33076 MIR4425-201ENST00000580572 84 ntBASIC3.75□□□□□ -1.81
CIITAP33076 AC068790.3-201ENST00000602988 553 ntBASIC3.75□□□□□ -1.81
CIITAP33076 AL031176.1-201ENST00000604554 466 ntBASIC3.75□□□□□ -1.81
CIITAP33076 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
CIITAP33076 MIR8058-201ENST00000615737 89 ntBASIC3.75□□□□□ -1.81
CIITAP33076 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.75□□□□□ -1.81
CIITAP33076 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.75□□□□□ -1.81
CIITAP33076 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.75□□□□□ -1.81
CIITAP33076 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.75□□□□□ -1.81
CIITAP33076 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.75□□□□□ -1.81
CIITAP33076 AC138915.3-201ENST00000562908 1389 ntBASIC3.75□□□□□ -1.81
CIITAP33076 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.75□□□□□ -1.81
CIITAP33076 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.74□□□□□ -1.81
CIITAP33076 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.74□□□□□ -1.81
CIITAP33076 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
CIITAP33076 MIR30E-201ENST00000362104 92 ntBASIC3.74□□□□□ -1.81
CIITAP33076 DEFB109C-201ENST00000382575 264 ntBASIC3.74□□□□□ -1.81
CIITAP33076 DEFB109B-201ENST00000382656 264 ntBASIC3.74□□□□□ -1.81
CIITAP33076 RNA5SP229-201ENST00000410809 99 ntBASIC3.74□□□□□ -1.81
CIITAP33076 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC3.74□□□□□ -1.81
CIITAP33076 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC3.74□□□□□ -1.81
CIITAP33076 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.74□□□□□ -1.81
CIITAP33076 HMGB1P31-201ENST00000437242 427 ntBASIC3.74□□□□□ -1.81
CIITAP33076 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.74□□□□□ -1.81
CIITAP33076 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.74□□□□□ -1.81
CIITAP33076 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC3.74□□□□□ -1.81
CIITAP33076 WASF1P1-201ENST00000447560 1131 ntBASIC3.74□□□□□ -1.81
CIITAP33076 AL136380.1-201ENST00000447970 162 ntBASIC3.74□□□□□ -1.81
CIITAP33076 TPT1P14-201ENST00000448018 505 ntBASIC3.74□□□□□ -1.81
CIITAP33076 NFU1P2-201ENST00000448700 469 ntBASIC3.74□□□□□ -1.81
CIITAP33076 RN7SL807P-201ENST00000470923 297 ntBASIC3.74□□□□□ -1.81
CIITAP33076 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC3.74□□□□□ -1.81
CIITAP33076 AC105914.1-201ENST00000511798 226 ntBASIC3.74□□□□□ -1.81
CIITAP33076 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.74□□□□□ -1.81
CIITAP33076 RNU1-61P-201ENST00000516107 151 ntBASIC3.74□□□□□ -1.81
CIITAP33076 Y_RNA.693-201ENST00000516641 110 ntBASIC3.74□□□□□ -1.81
CIITAP33076 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.74□□□□□ -1.81
CIITAP33076 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC3.74□□□□□ -1.81
CIITAP33076 AC068135.2-201ENST00000569293 1028 ntBASIC3.74□□□□□ -1.81
CIITAP33076 AC015917.1-201ENST00000579654 510 ntBASIC3.74□□□□□ -1.81
CIITAP33076 AC006504.3-201ENST00000586818 523 ntBASIC3.74□□□□□ -1.81
CIITAP33076 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.74□□□□□ -1.81
CIITAP33076 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.74□□□□□ -1.81
CIITAP33076 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.74□□□□□ -1.81
CIITAP33076 AC012669.1-201ENST00000603209 283 ntBASIC3.74□□□□□ -1.81
CIITAP33076 YPEL5P2-201ENST00000605553 359 ntBASIC3.74□□□□□ -1.81
CIITAP33076 AC104458.1-201ENST00000608243 463 ntBASIC3.74□□□□□ -1.81
CIITAP33076 AP001596.2-201ENST00000608410 312 ntBASIC3.74□□□□□ -1.81
CIITAP33076 AC004067.1-201ENST00000608733 700 ntBASIC3.74□□□□□ -1.81
CIITAP33076 AC103710.2-201ENST00000609912 942 ntBASIC3.74□□□□□ -1.81
CIITAP33076 AC245517.5-201ENST00000611529 162 ntBASIC3.74□□□□□ -1.81
CIITAP33076 RNVU1-4-201ENST00000612985 164 ntBASIC3.74□□□□□ -1.81
CIITAP33076 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.74□□□□□ -1.81
CIITAP33076 MIR7112-201ENST00000616126 65 ntBASIC3.74□□□□□ -1.81
CIITAP33076 uc_338.12-201ENST00000616344 181 ntBASIC3.74□□□□□ -1.81
CIITAP33076 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CIITAP33076 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
CIITAP33076 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.74□□□□□ -1.81
CIITAP33076 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
CIITAP33076 MTND5P1-201ENST00000445440 1375 ntBASIC3.74□□□□□ -1.81
CIITAP33076 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CIITAP33076 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.74□□□□□ -1.81
CIITAP33076 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CIITAP33076 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CIITAP33076 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CIITAP33076 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.73□□□□□ -1.81
CIITAP33076 SNORA20.2-201ENST00000383922 131 ntBASIC3.73□□□□□ -1.81
CIITAP33076 Y_RNA.402-201ENST00000383972 102 ntBASIC3.73□□□□□ -1.81
CIITAP33076 RNU6-483P-201ENST00000384088 108 ntBASIC3.73□□□□□ -1.81
CIITAP33076 AP000567.1-201ENST00000406413 156 ntBASIC3.73□□□□□ -1.81
CIITAP33076 SNORA11.1-201ENST00000408133 129 ntBASIC3.73□□□□□ -1.81
CIITAP33076 RNU6-55P-201ENST00000411092 107 ntBASIC3.73□□□□□ -1.81
CIITAP33076 RNU6-954P-201ENST00000411355 107 ntBASIC3.73□□□□□ -1.81
CIITAP33076 RPS15AP12-201ENST00000419498 388 ntBASIC3.73□□□□□ -1.81
CIITAP33076 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
CIITAP33076 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.73□□□□□ -1.81
CIITAP33076 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
CIITAP33076 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC3.73□□□□□ -1.81
CIITAP33076 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC3.73□□□□□ -1.81
CIITAP33076 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC3.73□□□□□ -1.81
CIITAP33076 MTCO2P29-201ENST00000465212 189 ntBASIC3.73□□□□□ -1.81
CIITAP33076 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CIITAP33076 RPS29P25-201ENST00000481709 171 ntBASIC3.73□□□□□ -1.81
CIITAP33076 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.73□□□□□ -1.81
CIITAP33076 KLHL2P1-201ENST00000508691 521 ntBASIC3.73□□□□□ -1.81
CIITAP33076 AC010493.1-201ENST00000513479 292 ntBASIC3.73□□□□□ -1.81
CIITAP33076 RN7SKP60-201ENST00000516985 239 ntBASIC3.73□□□□□ -1.81
CIITAP33076 RN7SKP289-201ENST00000517244 295 ntBASIC3.73□□□□□ -1.81
CIITAP33076 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC3.73□□□□□ -1.81
CIITAP33076 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC3.73□□□□□ -1.81
CIITAP33076 AP003034.1-201ENST00000534621 422 ntBASIC3.73□□□□□ -1.81
CIITAP33076 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC3.73□□□□□ -1.81
CIITAP33076 AL157687.1-201ENST00000554853 619 ntBASIC3.73□□□□□ -1.81
CIITAP33076 SUB1P2-201ENST00000556401 297 ntBASIC3.73□□□□□ -1.81
CIITAP33076 KC877982.1-201ENST00000602313 470 ntBASIC3.73□□□□□ -1.81
CIITAP33076 AC008277.2-201ENST00000605196 797 ntBASIC3.73□□□□□ -1.81
CIITAP33076 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.73□□□□□ -1.81
CIITAP33076 AP001330.5-201ENST00000607176 411 ntBASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms