Protein–RNA interactions for Protein: P31274

HOXC9, Homeobox protein Hox-C9, humanhuman

Predictions only

Length 260 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9P31274 DLEU2_1.1-201ENST00000612089 120 ntBASIC3.55□□□□□ -1.84
HOXC9P31274 DLEU2_1.2-201ENST00000614667 120 ntBASIC3.55□□□□□ -1.84
HOXC9P31274 AL590808.1-201ENST00000618696 141 ntBASIC3.55□□□□□ -1.84
HOXC9P31274 AL353748.2-201ENST00000622148 471 ntBASIC3.55□□□□□ -1.84
HOXC9P31274 AL603839.4-201ENST00000624658 1005 ntBASIC3.55□□□□□ -1.84
HOXC9P31274 AL159972.1-201ENST00000625150 448 ntBASIC3.55□□□□□ -1.84
HOXC9P31274 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.55□□□□□ -1.84
HOXC9P31274 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
HOXC9P31274 AP001350.1-201ENST00000601906 1524 ntBASIC3.54□□□□□ -1.84
HOXC9P31274 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
HOXC9P31274 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
HOXC9P31274 TEX21P-201ENST00000447107 1476 ntBASIC3.54□□□□□ -1.84
HOXC9P31274 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.54□□□□□ -1.84
HOXC9P31274 Y_RNA.559-201ENST00000384686 107 ntBASIC3.54□□□□□ -1.84
HOXC9P31274 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC3.54□□□□□ -1.84
HOXC9P31274 SPA17P1-201ENST00000416656 452 ntBASIC3.54□□□□□ -1.84
HOXC9P31274 RPL21P32-201ENST00000419877 477 ntBASIC3.54□□□□□ -1.84
HOXC9P31274 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.54□□□□□ -1.84
HOXC9P31274 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC3.54□□□□□ -1.84
HOXC9P31274 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC3.54□□□□□ -1.84
HOXC9P31274 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC3.54□□□□□ -1.84
HOXC9P31274 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.54□□□□□ -1.84
HOXC9P31274 AL592447.1-201ENST00000447592 540 ntBASIC3.54□□□□□ -1.84
HOXC9P31274 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.54□□□□□ -1.84
HOXC9P31274 SNRPFP4-201ENST00000456366 242 ntBASIC3.54□□□□□ -1.84
HOXC9P31274 CFTRP1-201ENST00000456646 183 ntBASIC3.54□□□□□ -1.84
HOXC9P31274 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.54□□□□□ -1.84
HOXC9P31274 SNRPGP3-201ENST00000469405 227 ntBASIC3.54□□□□□ -1.84
HOXC9P31274 RAP1BP2-201ENST00000478270 544 ntBASIC3.54□□□□□ -1.84
HOXC9P31274 TRBV12-1-201ENST00000479785 344 ntBASIC3.54□□□□□ -1.84
HOXC9P31274 AP004217.1-201ENST00000480579 346 ntBASIC3.54□□□□□ -1.84
HOXC9P31274 AC096751.1-202ENST00000502691 1067 ntBASIC3.54□□□□□ -1.84
HOXC9P31274 HMGB1P22-201ENST00000505315 124 ntBASIC3.54□□□□□ -1.84
HOXC9P31274 MLLT10P2-201ENST00000506434 249 ntBASIC3.54□□□□□ -1.84
HOXC9P31274 KLHL2P1-201ENST00000508691 521 ntBASIC3.54□□□□□ -1.84
HOXC9P31274 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.54□□□□□ -1.84
HOXC9P31274 ZNF192P1-203ENST00000565888 810 ntBASIC3.54□□□□□ -1.84
HOXC9P31274 AC137800.2-201ENST00000574375 120 ntBASIC3.54□□□□□ -1.84
HOXC9P31274 AC005771.1-201ENST00000585581 349 ntBASIC3.54□□□□□ -1.84
HOXC9P31274 AC009977.1-201ENST00000586015 570 ntBASIC3.54□□□□□ -1.84
HOXC9P31274 AC068790.3-201ENST00000602988 553 ntBASIC3.54□□□□□ -1.84
HOXC9P31274 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.54□□□□□ -1.84
HOXC9P31274 AL391813.2-201ENST00000609113 322 ntBASIC3.54□□□□□ -1.84
HOXC9P31274 AL355472.4-201ENST00000610233 626 ntBASIC3.54□□□□□ -1.84
HOXC9P31274 AC009159.1-201ENST00000618386 642 ntBASIC3.54□□□□□ -1.84
HOXC9P31274 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
HOXC9P31274 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
HOXC9P31274 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC3.53□□□□□ -1.84
HOXC9P31274 RNU4-75P-201ENST00000364621 146 ntBASIC3.53□□□□□ -1.84
HOXC9P31274 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
HOXC9P31274 RNU6-882P-201ENST00000391025 103 ntBASIC3.53□□□□□ -1.84
HOXC9P31274 MIR887-201ENST00000401258 79 ntBASIC3.53□□□□□ -1.84
HOXC9P31274 MIR1261-201ENST00000408659 82 ntBASIC3.53□□□□□ -1.84
HOXC9P31274 RNU2-43P-201ENST00000410306 190 ntBASIC3.53□□□□□ -1.84
HOXC9P31274 RNU6-516P-201ENST00000411381 104 ntBASIC3.53□□□□□ -1.84
HOXC9P31274 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.53□□□□□ -1.84
HOXC9P31274 AC233728.2-201ENST00000425348 757 ntBASIC3.53□□□□□ -1.84
HOXC9P31274 AL121871.1-201ENST00000443413 436 ntBASIC3.53□□□□□ -1.84
HOXC9P31274 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC3.53□□□□□ -1.84
HOXC9P31274 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.53□□□□□ -1.84
HOXC9P31274 AC055855.1-201ENST00000489563 579 ntBASIC3.53□□□□□ -1.84
HOXC9P31274 NDUFB4P2-201ENST00000509515 391 ntBASIC3.53□□□□□ -1.84
HOXC9P31274 AC079140.3-201ENST00000511111 550 ntBASIC3.53□□□□□ -1.84
HOXC9P31274 MTND3P5-201ENST00000512798 333 ntBASIC3.53□□□□□ -1.84
HOXC9P31274 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC3.53□□□□□ -1.84
HOXC9P31274 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.53□□□□□ -1.84
HOXC9P31274 AP003122.3-201ENST00000526316 255 ntBASIC3.53□□□□□ -1.84
HOXC9P31274 AP001646.1-201ENST00000527936 915 ntBASIC3.53□□□□□ -1.84
HOXC9P31274 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC3.53□□□□□ -1.84
HOXC9P31274 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC3.53□□□□□ -1.84
HOXC9P31274 AC125611.2-201ENST00000551907 647 ntBASIC3.53□□□□□ -1.84
HOXC9P31274 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC3.53□□□□□ -1.84
HOXC9P31274 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC3.53□□□□□ -1.84
HOXC9P31274 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.53□□□□□ -1.84
HOXC9P31274 AL356432.3-201ENST00000568952 465 ntBASIC3.53□□□□□ -1.84
HOXC9P31274 AL359999.1-201ENST00000604513 294 ntBASIC3.53□□□□□ -1.84
HOXC9P31274 AC006566.1-201ENST00000608943 513 ntBASIC3.53□□□□□ -1.84
HOXC9P31274 AC108747.1-201ENST00000609508 535 ntBASIC3.53□□□□□ -1.84
HOXC9P31274 AC138749.5-201ENST00000611461 208 ntBASIC3.53□□□□□ -1.84
HOXC9P31274 AC116165.2-201ENST00000616705 206 ntBASIC3.53□□□□□ -1.84
HOXC9P31274 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.53□□□□□ -1.84
HOXC9P31274 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.53□□□□□ -1.84
HOXC9P31274 AC099654.13-201ENST00000639774 207 ntBASIC3.53□□□□□ -1.84
HOXC9P31274 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.53□□□□□ -1.84
HOXC9P31274 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.53□□□□□ -1.84
HOXC9P31274 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
HOXC9P31274 AL021368.2-201ENST00000606125 5352 ntBASIC3.52□□□□□ -1.85
HOXC9P31274 Y_RNA.194-201ENST00000363985 102 ntBASIC3.52□□□□□ -1.85
HOXC9P31274 OR5H15-201ENST00000383696 930 ntBASIC3.52□□□□□ -1.85
HOXC9P31274 SNORA75-201ENST00000384158 137 ntBASIC3.52□□□□□ -1.85
HOXC9P31274 RNU6-297P-201ENST00000384636 107 ntBASIC3.52□□□□□ -1.85
HOXC9P31274 DEFB108C-201ENST00000400154 252 ntBASIC3.52□□□□□ -1.85
HOXC9P31274 RPS3AP24-201ENST00000407896 734 ntBASIC3.52□□□□□ -1.85
HOXC9P31274 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC3.52□□□□□ -1.85
HOXC9P31274 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC3.52□□□□□ -1.85
HOXC9P31274 YPEL5P1-201ENST00000419731 367 ntBASIC3.52□□□□□ -1.85
HOXC9P31274 RPL21P66-201ENST00000426566 466 ntBASIC3.52□□□□□ -1.85
HOXC9P31274 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC3.52□□□□□ -1.85
HOXC9P31274 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.52□□□□□ -1.85
HOXC9P31274 AL049734.2-201ENST00000441066 616 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 119.7 ms