Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.38□□□□□ -1.87
HOXC8P31273 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.38□□□□□ -1.87
HOXC8P31273 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC3.38□□□□□ -1.87
HOXC8P31273 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.38□□□□□ -1.87
HOXC8P31273 NDUFAF4P4-201ENST00000454883 502 ntBASIC3.38□□□□□ -1.87
HOXC8P31273 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
HOXC8P31273 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
HOXC8P31273 CDC42P4-201ENST00000510507 563 ntBASIC3.38□□□□□ -1.87
HOXC8P31273 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC3.38□□□□□ -1.87
HOXC8P31273 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.38□□□□□ -1.87
HOXC8P31273 SNORA31.1-201ENST00000515993 133 ntBASIC3.38□□□□□ -1.87
HOXC8P31273 SNORA31.5-201ENST00000516190 133 ntBASIC3.38□□□□□ -1.87
HOXC8P31273 SNORD59.2-201ENST00000516873 68 ntBASIC3.38□□□□□ -1.87
HOXC8P31273 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.38□□□□□ -1.87
HOXC8P31273 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.38□□□□□ -1.87
HOXC8P31273 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.38□□□□□ -1.87
HOXC8P31273 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.38□□□□□ -1.87
HOXC8P31273 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC3.38□□□□□ -1.87
HOXC8P31273 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC3.38□□□□□ -1.87
HOXC8P31273 AC245505.1-201ENST00000556398 224 ntBASIC3.38□□□□□ -1.87
HOXC8P31273 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC3.38□□□□□ -1.87
HOXC8P31273 AC005771.1-201ENST00000585581 349 ntBASIC3.38□□□□□ -1.87
HOXC8P31273 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.38□□□□□ -1.87
HOXC8P31273 RPL12P50-201ENST00000603116 116 ntBASIC3.38□□□□□ -1.87
HOXC8P31273 BCRP9-201ENST00000605312 388 ntBASIC3.38□□□□□ -1.87
HOXC8P31273 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
HOXC8P31273 AL359740.1-201ENST00000624340 592 ntBASIC3.38□□□□□ -1.87
HOXC8P31273 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.38□□□□□ -1.87
HOXC8P31273 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
HOXC8P31273 AC007496.3-201ENST00000624987 3443 ntBASIC3.38□□□□□ -1.87
HOXC8P31273 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
HOXC8P31273 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
HOXC8P31273 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
HOXC8P31273 AC027514.1-201ENST00000588561 1603 ntBASIC3.37□□□□□ -1.87
HOXC8P31273 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
HOXC8P31273 OR5J1P-201ENST00000313544 939 ntBASIC3.37□□□□□ -1.87
HOXC8P31273 Y_RNA.41-201ENST00000362646 102 ntBASIC3.37□□□□□ -1.87
HOXC8P31273 RNU6-533P-201ENST00000384144 107 ntBASIC3.37□□□□□ -1.87
HOXC8P31273 RNU6-769P-201ENST00000384407 104 ntBASIC3.37□□□□□ -1.87
HOXC8P31273 RNU6-1215P-201ENST00000384441 102 ntBASIC3.37□□□□□ -1.87
HOXC8P31273 SNORA40.3-201ENST00000390964 122 ntBASIC3.37□□□□□ -1.87
HOXC8P31273 MIR1305-201ENST00000408300 86 ntBASIC3.37□□□□□ -1.87
HOXC8P31273 RNU2-66P-201ENST00000410650 161 ntBASIC3.37□□□□□ -1.87
HOXC8P31273 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC3.37□□□□□ -1.87
HOXC8P31273 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.37□□□□□ -1.87
HOXC8P31273 PPP1R11P2-201ENST00000423543 382 ntBASIC3.37□□□□□ -1.87
HOXC8P31273 AC008850.1-201ENST00000427546 362 ntBASIC3.37□□□□□ -1.87
HOXC8P31273 AC104651.1-201ENST00000427559 735 ntBASIC3.37□□□□□ -1.87
HOXC8P31273 NDUFB4P6-201ENST00000436819 366 ntBASIC3.37□□□□□ -1.87
HOXC8P31273 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.37□□□□□ -1.87
HOXC8P31273 RPS12P18-201ENST00000442381 270 ntBASIC3.37□□□□□ -1.87
HOXC8P31273 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC3.37□□□□□ -1.87
HOXC8P31273 USP9YP12-201ENST00000450481 570 ntBASIC3.37□□□□□ -1.87
HOXC8P31273 MTCO1P42-201ENST00000457379 726 ntBASIC3.37□□□□□ -1.87
HOXC8P31273 AL049874.1-201ENST00000489560 388 ntBASIC3.37□□□□□ -1.87
HOXC8P31273 AC022447.3-201ENST00000506865 495 ntBASIC3.37□□□□□ -1.87
HOXC8P31273 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC3.37□□□□□ -1.87
HOXC8P31273 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC3.37□□□□□ -1.87
HOXC8P31273 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.37□□□□□ -1.87
HOXC8P31273 AP003497.1-201ENST00000528472 562 ntBASIC3.37□□□□□ -1.87
HOXC8P31273 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC3.37□□□□□ -1.87
HOXC8P31273 AC010546.1-201ENST00000569391 485 ntBASIC3.37□□□□□ -1.87
HOXC8P31273 MIR4528-201ENST00000577763 90 ntBASIC3.37□□□□□ -1.87
HOXC8P31273 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC3.37□□□□□ -1.87
HOXC8P31273 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.37□□□□□ -1.87
HOXC8P31273 AC006023.1-201ENST00000603944 259 ntBASIC3.37□□□□□ -1.87
HOXC8P31273 AC098614.4-201ENST00000607601 462 ntBASIC3.37□□□□□ -1.87
HOXC8P31273 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC3.37□□□□□ -1.87
HOXC8P31273 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC3.37□□□□□ -1.87
HOXC8P31273 AL589743.7-201ENST00000612637 233 ntBASIC3.37□□□□□ -1.87
HOXC8P31273 AC104010.1-201ENST00000616889 150 ntBASIC3.37□□□□□ -1.87
HOXC8P31273 AL603839.4-201ENST00000624658 1005 ntBASIC3.37□□□□□ -1.87
HOXC8P31273 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
HOXC8P31273 AC011460.1-201ENST00000636268 1834 ntBASIC3.37□□□□□ -1.87
HOXC8P31273 TPTE2P4-201ENST00000258589 1605 ntBASIC3.37□□□□□ -1.87
HOXC8P31273 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
HOXC8P31273 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
HOXC8P31273 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
HOXC8P31273 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
HOXC8P31273 RNU6-223P-201ENST00000362830 107 ntBASIC3.36□□□□□ -1.87
HOXC8P31273 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
HOXC8P31273 RNU6-432P-201ENST00000384196 109 ntBASIC3.36□□□□□ -1.87
HOXC8P31273 RNU6-297P-201ENST00000384636 107 ntBASIC3.36□□□□□ -1.87
HOXC8P31273 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC3.36□□□□□ -1.87
HOXC8P31273 RPL30P2-201ENST00000414021 291 ntBASIC3.36□□□□□ -1.87
HOXC8P31273 EEF1A1P41-201ENST00000414667 207 ntBASIC3.36□□□□□ -1.87
HOXC8P31273 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.36□□□□□ -1.87
HOXC8P31273 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC3.36□□□□□ -1.87
HOXC8P31273 AC018630.2-202ENST00000422992 927 ntBASIC3.36□□□□□ -1.87
HOXC8P31273 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.36□□□□□ -1.87
HOXC8P31273 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.36□□□□□ -1.87
HOXC8P31273 AC109583.1-201ENST00000432156 268 ntBASIC3.36□□□□□ -1.87
HOXC8P31273 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC3.36□□□□□ -1.87
HOXC8P31273 AC092573.2-201ENST00000434546 243 ntBASIC3.36□□□□□ -1.87
HOXC8P31273 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.36□□□□□ -1.87
HOXC8P31273 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC3.36□□□□□ -1.87
HOXC8P31273 RPL7P36-201ENST00000444633 681 ntBASIC3.36□□□□□ -1.87
HOXC8P31273 AP000542.1-201ENST00000448473 371 ntBASIC3.36□□□□□ -1.87
HOXC8P31273 AL590365.1-201ENST00000450788 243 ntBASIC3.36□□□□□ -1.87
HOXC8P31273 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms