Protein–RNA interactions for Protein: P31270

HOXA11, Homeobox protein Hox-A11, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11P31270 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
HOXA11P31270 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
HOXA11P31270 OR5J1P-201ENST00000313544 939 ntBASIC3.63□□□□□ -1.83
HOXA11P31270 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
HOXA11P31270 RNU6-359P-201ENST00000365466 108 ntBASIC3.63□□□□□ -1.83
HOXA11P31270 RNU6-483P-201ENST00000384088 108 ntBASIC3.63□□□□□ -1.83
HOXA11P31270 U3.19-201ENST00000390893 196 ntBASIC3.63□□□□□ -1.83
HOXA11P31270 AL591034.1-201ENST00000407447 340 ntBASIC3.63□□□□□ -1.83
HOXA11P31270 RNU6-908P-201ENST00000410160 94 ntBASIC3.63□□□□□ -1.83
HOXA11P31270 AC009237.5-201ENST00000414271 501 ntBASIC3.63□□□□□ -1.83
HOXA11P31270 AC012065.2-201ENST00000421295 375 ntBASIC3.63□□□□□ -1.83
HOXA11P31270 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.63□□□□□ -1.83
HOXA11P31270 AC091390.3-201ENST00000426478 338 ntBASIC3.63□□□□□ -1.83
HOXA11P31270 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC3.63□□□□□ -1.83
HOXA11P31270 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.63□□□□□ -1.83
HOXA11P31270 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.63□□□□□ -1.83
HOXA11P31270 RPL31P35-201ENST00000431058 377 ntBASIC3.63□□□□□ -1.83
HOXA11P31270 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.63□□□□□ -1.83
HOXA11P31270 AC104850.1-201ENST00000435940 476 ntBASIC3.63□□□□□ -1.83
HOXA11P31270 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.63□□□□□ -1.83
HOXA11P31270 CYCSP32-201ENST00000440548 321 ntBASIC3.63□□□□□ -1.83
HOXA11P31270 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.63□□□□□ -1.83
HOXA11P31270 MTND1P11-201ENST00000456661 876 ntBASIC3.63□□□□□ -1.83
HOXA11P31270 RPS4XP2-201ENST00000458402 793 ntBASIC3.63□□□□□ -1.83
HOXA11P31270 MTCO2P29-201ENST00000465212 189 ntBASIC3.63□□□□□ -1.83
HOXA11P31270 AC093767.1-201ENST00000504523 156 ntBASIC3.63□□□□□ -1.83
HOXA11P31270 Vault.3-201ENST00000516676 95 ntBASIC3.63□□□□□ -1.83
HOXA11P31270 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC3.63□□□□□ -1.83
HOXA11P31270 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.63□□□□□ -1.83
HOXA11P31270 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
HOXA11P31270 AL512360.1-201ENST00000555346 234 ntBASIC3.63□□□□□ -1.83
HOXA11P31270 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.63□□□□□ -1.83
HOXA11P31270 MIR3118-1-201ENST00000581787 76 ntBASIC3.63□□□□□ -1.83
HOXA11P31270 AC005730.3-201ENST00000583067 366 ntBASIC3.63□□□□□ -1.83
HOXA11P31270 AC009994.1-201ENST00000606889 253 ntBASIC3.63□□□□□ -1.83
HOXA11P31270 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.63□□□□□ -1.83
HOXA11P31270 AC009268.2-201ENST00000621925 457 ntBASIC3.63□□□□□ -1.83
HOXA11P31270 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
HOXA11P31270 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.63□□□□□ -1.83
HOXA11P31270 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
HOXA11P31270 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
HOXA11P31270 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
HOXA11P31270 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
HOXA11P31270 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
HOXA11P31270 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
HOXA11P31270 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
HOXA11P31270 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
HOXA11P31270 FAM35DP-201ENST00000323387 2712 ntBASIC3.62□□□□□ -1.83
HOXA11P31270 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
HOXA11P31270 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.62□□□□□ -1.83
HOXA11P31270 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
HOXA11P31270 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.62□□□□□ -1.83
HOXA11P31270 Y_RNA.61-201ENST00000362835 102 ntBASIC3.62□□□□□ -1.83
HOXA11P31270 RNU4-76P-201ENST00000364509 141 ntBASIC3.62□□□□□ -1.83
HOXA11P31270 RNU6-282P-201ENST00000365357 103 ntBASIC3.62□□□□□ -1.83
HOXA11P31270 FGFR1OP2P1-201ENST00000395943 500 ntBASIC3.62□□□□□ -1.83
HOXA11P31270 RPS4XP8-201ENST00000402039 771 ntBASIC3.62□□□□□ -1.83
HOXA11P31270 AL136116.1-201ENST00000403591 381 ntBASIC3.62□□□□□ -1.83
HOXA11P31270 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC3.62□□□□□ -1.83
HOXA11P31270 ZNF90P2-204ENST00000419323 1075 ntBASIC3.62□□□□□ -1.83
HOXA11P31270 AL353193.1-201ENST00000421444 268 ntBASIC3.62□□□□□ -1.83
HOXA11P31270 AC002075.2-201ENST00000425207 252 ntBASIC3.62□□□□□ -1.83
HOXA11P31270 AL590233.1-201ENST00000430017 456 ntBASIC3.62□□□□□ -1.83
HOXA11P31270 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC3.62□□□□□ -1.83
HOXA11P31270 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.62□□□□□ -1.83
HOXA11P31270 USP9YP8-201ENST00000441913 500 ntBASIC3.62□□□□□ -1.83
HOXA11P31270 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC3.62□□□□□ -1.83
HOXA11P31270 AC005297.2-201ENST00000450430 606 ntBASIC3.62□□□□□ -1.83
HOXA11P31270 ELOCP23-201ENST00000452014 332 ntBASIC3.62□□□□□ -1.83
HOXA11P31270 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.62□□□□□ -1.83
HOXA11P31270 RPL36AP51-201ENST00000487216 318 ntBASIC3.62□□□□□ -1.83
HOXA11P31270 AC091951.2-201ENST00000500762 203 ntBASIC3.62□□□□□ -1.83
HOXA11P31270 MLLT10P2-201ENST00000506434 249 ntBASIC3.62□□□□□ -1.83
HOXA11P31270 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.62□□□□□ -1.83
HOXA11P31270 RNU6-875P-201ENST00000516488 106 ntBASIC3.62□□□□□ -1.83
HOXA11P31270 AF235103.2-201ENST00000525753 346 ntBASIC3.62□□□□□ -1.83
HOXA11P31270 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
HOXA11P31270 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.62□□□□□ -1.83
HOXA11P31270 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.62□□□□□ -1.83
HOXA11P31270 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC3.62□□□□□ -1.83
HOXA11P31270 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC3.62□□□□□ -1.83
HOXA11P31270 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.62□□□□□ -1.83
HOXA11P31270 MIR5004-201ENST00000579078 107 ntBASIC3.62□□□□□ -1.83
HOXA11P31270 MIR3167-201ENST00000579623 85 ntBASIC3.62□□□□□ -1.83
HOXA11P31270 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC3.62□□□□□ -1.83
HOXA11P31270 AC012507.3-201ENST00000603556 477 ntBASIC3.62□□□□□ -1.83
HOXA11P31270 AL162713.1-201ENST00000604480 262 ntBASIC3.62□□□□□ -1.83
HOXA11P31270 AC005000.2-201ENST00000605468 310 ntBASIC3.62□□□□□ -1.83
HOXA11P31270 AC055876.5-201ENST00000605667 259 ntBASIC3.62□□□□□ -1.83
HOXA11P31270 OR10AB1P-201ENST00000609613 938 ntBASIC3.62□□□□□ -1.83
HOXA11P31270 AL360181.4-201ENST00000621752 134 ntBASIC3.62□□□□□ -1.83
HOXA11P31270 AC139792.3-201ENST00000623525 224 ntBASIC3.62□□□□□ -1.83
HOXA11P31270 FER-210ENST00000628534 558 ntTSL 5 BASIC3.62□□□□□ -1.83
HOXA11P31270 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
HOXA11P31270 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
HOXA11P31270 AC005183.1-201ENST00000603687 1979 ntBASIC3.62□□□□□ -1.83
HOXA11P31270 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.61□□□□□ -1.83
HOXA11P31270 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
HOXA11P31270 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
HOXA11P31270 RNU5E-1-201ENST00000362477 120 ntBASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms