Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 RNU5A-4P-201ENST00000516588 111 ntBASIC2.5□□□□□ -2.01
HOXA9P31269 SNORA31.15-201ENST00000516771 132 ntBASIC2.5□□□□□ -2.01
HOXA9P31269 AC022861.1-201ENST00000522981 663 ntBASIC2.5□□□□□ -2.01
HOXA9P31269 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC2.5□□□□□ -2.01
HOXA9P31269 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
HOXA9P31269 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.5□□□□□ -2.01
HOXA9P31269 SETP7-201ENST00000552169 453 ntBASIC2.5□□□□□ -2.01
HOXA9P31269 SNRPGP18-201ENST00000553000 214 ntBASIC2.5□□□□□ -2.01
HOXA9P31269 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC2.5□□□□□ -2.01
HOXA9P31269 DUXAP1-201ENST00000556632 463 ntBASIC2.5□□□□□ -2.01
HOXA9P31269 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.5□□□□□ -2.01
HOXA9P31269 AC026464.5-201ENST00000562497 722 ntBASIC2.5□□□□□ -2.01
HOXA9P31269 MIR5007-201ENST00000583098 95 ntBASIC2.5□□□□□ -2.01
HOXA9P31269 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC2.5□□□□□ -2.01
HOXA9P31269 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC2.5□□□□□ -2.01
HOXA9P31269 AC234772.3-201ENST00000602277 528 ntBASIC2.5□□□□□ -2.01
HOXA9P31269 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC2.5□□□□□ -2.01
HOXA9P31269 AC025588.2-201ENST00000604851 466 ntBASIC2.5□□□□□ -2.01
HOXA9P31269 AL158042.1-201ENST00000605338 460 ntBASIC2.5□□□□□ -2.01
HOXA9P31269 AC055876.5-201ENST00000605667 259 ntBASIC2.5□□□□□ -2.01
HOXA9P31269 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC2.5□□□□□ -2.01
HOXA9P31269 AC080013.4-201ENST00000607624 649 ntBASIC2.5□□□□□ -2.01
HOXA9P31269 AC034102.8-201ENST00000615146 484 ntBASIC2.5□□□□□ -2.01
HOXA9P31269 AL353748.2-201ENST00000622148 471 ntBASIC2.5□□□□□ -2.01
HOXA9P31269 AC010297.1-201ENST00000623948 149 ntBASIC2.5□□□□□ -2.01
HOXA9P31269 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.5□□□□□ -2.01
HOXA9P31269 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.5□□□□□ -2.01
HOXA9P31269 AL022578.1-201ENST00000439330 1433 ntBASIC2.5□□□□□ -2.01
HOXA9P31269 OR4G11P-202ENST00000642116 1414 ntBASIC2.5□□□□□ -2.01
HOXA9P31269 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
HOXA9P31269 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
HOXA9P31269 AP000568.1-201ENST00000282964 442 ntBASIC2.49□□□□□ -2.01
HOXA9P31269 RPL21P132-201ENST00000331267 462 ntBASIC2.49□□□□□ -2.01
HOXA9P31269 RNU1-105P-201ENST00000363470 161 ntBASIC2.49□□□□□ -2.01
HOXA9P31269 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
HOXA9P31269 PIGPP2-201ENST00000411569 458 ntBASIC2.49□□□□□ -2.01
HOXA9P31269 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC2.49□□□□□ -2.01
HOXA9P31269 MTCYBP38-201ENST00000417160 1123 ntBASIC2.49□□□□□ -2.01
HOXA9P31269 HMGB1P49-201ENST00000418882 569 ntBASIC2.49□□□□□ -2.01
HOXA9P31269 AL953862.1-201ENST00000423016 168 ntBASIC2.49□□□□□ -2.01
HOXA9P31269 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC2.49□□□□□ -2.01
HOXA9P31269 MTND4P6-201ENST00000438297 472 ntBASIC2.49□□□□□ -2.01
HOXA9P31269 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
HOXA9P31269 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC2.49□□□□□ -2.01
HOXA9P31269 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.49□□□□□ -2.01
HOXA9P31269 AC096638.1-201ENST00000444678 216 ntBASIC2.49□□□□□ -2.01
HOXA9P31269 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC2.49□□□□□ -2.01
HOXA9P31269 AC023424.2-201ENST00000493479 777 ntBASIC2.49□□□□□ -2.01
HOXA9P31269 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC2.49□□□□□ -2.01
HOXA9P31269 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC2.49□□□□□ -2.01
HOXA9P31269 AC092436.1-201ENST00000506450 503 ntBASIC2.49□□□□□ -2.01
HOXA9P31269 RNU6-1095P-201ENST00000516148 108 ntBASIC2.49□□□□□ -2.01
HOXA9P31269 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC2.49□□□□□ -2.01
HOXA9P31269 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC2.49□□□□□ -2.01
HOXA9P31269 OR5BN1P-201ENST00000532955 829 ntBASIC2.49□□□□□ -2.01
HOXA9P31269 AC023538.1-201ENST00000534576 736 ntBASIC2.49□□□□□ -2.01
HOXA9P31269 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC2.49□□□□□ -2.01
HOXA9P31269 AC009712.1-201ENST00000564938 316 ntBASIC2.49□□□□□ -2.01
HOXA9P31269 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC2.49□□□□□ -2.01
HOXA9P31269 AC010738.1-201ENST00000604970 987 ntBASIC2.49□□□□□ -2.01
HOXA9P31269 AL390208.1-201ENST00000605885 644 ntBASIC2.49□□□□□ -2.01
HOXA9P31269 AC067747.1-201ENST00000608026 250 ntBASIC2.49□□□□□ -2.01
HOXA9P31269 AP002826.1-201ENST00000608835 315 ntBASIC2.49□□□□□ -2.01
HOXA9P31269 AC245297.2-201ENST00000610119 565 ntBASIC2.49□□□□□ -2.01
HOXA9P31269 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
HOXA9P31269 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC2.49□□□□□ -2.01
HOXA9P31269 AC008993.2-201ENST00000631744 806 ntBASIC2.49□□□□□ -2.01
HOXA9P31269 AC093536.2-201ENST00000565257 1406 ntBASIC2.49□□□□□ -2.01
HOXA9P31269 AC097714.1-201ENST00000511272 1647 ntBASIC2.49□□□□□ -2.01
HOXA9P31269 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.49□□□□□ -2.01
HOXA9P31269 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
HOXA9P31269 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
HOXA9P31269 FAM133CP-201ENST00000332869 704 ntBASIC2.48□□□□□ -2.01
HOXA9P31269 SET-203ENST00000372688 801 ntTSL 2 BASIC2.48□□□□□ -2.01
HOXA9P31269 TAS2R15P-201ENST00000390674 928 ntBASIC2.48□□□□□ -2.01
HOXA9P31269 USP9YP33-201ENST00000412220 421 ntBASIC2.48□□□□□ -2.01
HOXA9P31269 XKRYP1-201ENST00000423438 492 ntBASIC2.48□□□□□ -2.01
HOXA9P31269 AC019178.2-201ENST00000423595 505 ntBASIC2.48□□□□□ -2.01
HOXA9P31269 RPL27AP8-201ENST00000424277 446 ntBASIC2.48□□□□□ -2.01
HOXA9P31269 ZYG11AP1-201ENST00000430329 837 ntBASIC2.48□□□□□ -2.01
HOXA9P31269 XKRYP2-201ENST00000432915 492 ntBASIC2.48□□□□□ -2.01
HOXA9P31269 USP9YP35-201ENST00000435696 412 ntBASIC2.48□□□□□ -2.01
HOXA9P31269 MTND5P14-201ENST00000441481 1267 ntBASIC2.48□□□□□ -2.01
HOXA9P31269 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC2.48□□□□□ -2.01
HOXA9P31269 Z82190.1-201ENST00000454534 490 ntBASIC2.48□□□□□ -2.01
HOXA9P31269 BX322784.1-201ENST00000455793 1077 ntBASIC2.48□□□□□ -2.01
HOXA9P31269 AC133134.1-201ENST00000466800 359 ntBASIC2.48□□□□□ -2.01
HOXA9P31269 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.48□□□□□ -2.01
HOXA9P31269 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.48□□□□□ -2.01
HOXA9P31269 AC112673.1-201ENST00000513168 575 ntBASIC2.48□□□□□ -2.01
HOXA9P31269 RNU6-150P-201ENST00000516237 95 ntBASIC2.48□□□□□ -2.01
HOXA9P31269 RNU1-104P-201ENST00000517280 175 ntBASIC2.48□□□□□ -2.01
HOXA9P31269 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.48□□□□□ -2.01
HOXA9P31269 AC023050.2-201ENST00000544968 387 ntBASIC2.48□□□□□ -2.01
HOXA9P31269 AC087465.1-201ENST00000560574 245 ntBASIC2.48□□□□□ -2.01
HOXA9P31269 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC2.48□□□□□ -2.01
HOXA9P31269 MTATP6P24-201ENST00000576835 677 ntBASIC2.48□□□□□ -2.01
HOXA9P31269 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC2.48□□□□□ -2.01
HOXA9P31269 AL391001.1-201ENST00000602747 715 ntBASIC2.48□□□□□ -2.01
HOXA9P31269 AC098826.3-201ENST00000603823 466 ntBASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms