Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 MIR6733-201ENST00000635723 61 ntBASIC2.72□□□□□ -1.97
PTPN6P29350 MTND1P37-201ENST00000636562 264 ntBASIC2.72□□□□□ -1.97
PTPN6P29350 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
PTPN6P29350 CCT4P2-201ENST00000233836 1548 ntBASIC2.72□□□□□ -1.97
PTPN6P29350 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
PTPN6P29350 AL365361.1-201ENST00000566942 3481 ntBASIC2.72□□□□□ -1.97
PTPN6P29350 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
PTPN6P29350 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
PTPN6P29350 AL391994.1-201ENST00000254724 282 ntBASIC2.71□□□□□ -1.98
PTPN6P29350 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.71□□□□□ -1.98
PTPN6P29350 RNU1-109P-201ENST00000383960 147 ntBASIC2.71□□□□□ -1.98
PTPN6P29350 MIR512-1-201ENST00000384913 84 ntBASIC2.71□□□□□ -1.98
PTPN6P29350 CCNG1P1-201ENST00000406783 885 ntBASIC2.71□□□□□ -1.98
PTPN6P29350 SNORD88.1-201ENST00000408684 91 ntBASIC2.71□□□□□ -1.98
PTPN6P29350 RPL19P1-201ENST00000411635 428 ntBASIC2.71□□□□□ -1.98
PTPN6P29350 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC2.71□□□□□ -1.98
PTPN6P29350 VPS26BP1-201ENST00000417155 755 ntBASIC2.71□□□□□ -1.98
PTPN6P29350 AC098592.1-201ENST00000419352 333 ntBASIC2.71□□□□□ -1.98
PTPN6P29350 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.71□□□□□ -1.98
PTPN6P29350 AC098614.2-201ENST00000426040 255 ntBASIC2.71□□□□□ -1.98
PTPN6P29350 ZNF863P-201ENST00000426746 417 ntBASIC2.71□□□□□ -1.98
PTPN6P29350 AC009414.1-201ENST00000427200 443 ntBASIC2.71□□□□□ -1.98
PTPN6P29350 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC2.71□□□□□ -1.98
PTPN6P29350 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.71□□□□□ -1.98
PTPN6P29350 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC2.71□□□□□ -1.98
PTPN6P29350 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC2.71□□□□□ -1.98
PTPN6P29350 AC010631.1-201ENST00000474150 156 ntBASIC2.71□□□□□ -1.98
PTPN6P29350 AC072039.1-201ENST00000477611 581 ntBASIC2.71□□□□□ -1.98
PTPN6P29350 AC126182.1-201ENST00000478134 357 ntBASIC2.71□□□□□ -1.98
PTPN6P29350 RPL9P33-201ENST00000484311 566 ntBASIC2.71□□□□□ -1.98
PTPN6P29350 AC080014.1-201ENST00000496877 1201 ntBASIC2.71□□□□□ -1.98
PTPN6P29350 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.71□□□□□ -1.98
PTPN6P29350 SNORA3.4-201ENST00000515969 96 ntBASIC2.71□□□□□ -1.98
PTPN6P29350 RPPH1-2P-201ENST00000516688 293 ntBASIC2.71□□□□□ -1.98
PTPN6P29350 RN7SKP40-201ENST00000517211 242 ntBASIC2.71□□□□□ -1.98
PTPN6P29350 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC2.71□□□□□ -1.98
PTPN6P29350 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC2.71□□□□□ -1.98
PTPN6P29350 AC123904.3-201ENST00000547218 814 ntBASIC2.71□□□□□ -1.98
PTPN6P29350 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.71□□□□□ -1.98
PTPN6P29350 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC2.71□□□□□ -1.98
PTPN6P29350 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
PTPN6P29350 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC2.71□□□□□ -1.98
PTPN6P29350 AC079395.3-201ENST00000615161 484 ntBASIC2.71□□□□□ -1.98
PTPN6P29350 AC012150.2-201ENST00000621300 544 ntBASIC2.71□□□□□ -1.98
PTPN6P29350 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC2.71□□□□□ -1.98
PTPN6P29350 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
PTPN6P29350 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
PTPN6P29350 AC006378.2-201ENST00000623178 2476 ntBASIC2.7□□□□□ -1.98
PTPN6P29350 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.7□□□□□ -1.98
PTPN6P29350 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.7□□□□□ -1.98
PTPN6P29350 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.7□□□□□ -1.98
PTPN6P29350 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.7□□□□□ -1.98
PTPN6P29350 RNU6-7-201ENST00000364784 107 ntBASIC2.7□□□□□ -1.98
PTPN6P29350 SNORA9.2-201ENST00000365361 133 ntBASIC2.7□□□□□ -1.98
PTPN6P29350 RNU6-8-201ENST00000365467 107 ntBASIC2.7□□□□□ -1.98
PTPN6P29350 RNU6-217P-201ENST00000384164 104 ntBASIC2.7□□□□□ -1.98
PTPN6P29350 RNU6-278P-201ENST00000390945 109 ntBASIC2.7□□□□□ -1.98
PTPN6P29350 AL139281.1-201ENST00000422120 335 ntBASIC2.7□□□□□ -1.98
PTPN6P29350 XKRYP1-201ENST00000423438 492 ntBASIC2.7□□□□□ -1.98
PTPN6P29350 AC092427.1-202ENST00000430569 476 ntBASIC2.7□□□□□ -1.98
PTPN6P29350 AC022018.1-201ENST00000430685 241 ntBASIC2.7□□□□□ -1.98
PTPN6P29350 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.7□□□□□ -1.98
PTPN6P29350 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC2.7□□□□□ -1.98
PTPN6P29350 XKRYP2-201ENST00000432915 492 ntBASIC2.7□□□□□ -1.98
PTPN6P29350 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
PTPN6P29350 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC2.7□□□□□ -1.98
PTPN6P29350 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC2.7□□□□□ -1.98
PTPN6P29350 AL591719.1-201ENST00000444669 744 ntBASIC2.7□□□□□ -1.98
PTPN6P29350 MTCYBP3-201ENST00000445588 1137 ntBASIC2.7□□□□□ -1.98
PTPN6P29350 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.7□□□□□ -1.98
PTPN6P29350 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC2.7□□□□□ -1.98
PTPN6P29350 GSTA11P-201ENST00000452866 669 ntBASIC2.7□□□□□ -1.98
PTPN6P29350 AC103975.1-201ENST00000482506 483 ntBASIC2.7□□□□□ -1.98
PTPN6P29350 RN7SL297P-201ENST00000483161 293 ntBASIC2.7□□□□□ -1.98
PTPN6P29350 AC055855.1-201ENST00000489563 579 ntBASIC2.7□□□□□ -1.98
PTPN6P29350 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC2.7□□□□□ -1.98
PTPN6P29350 AC138853.1-201ENST00000503549 823 ntBASIC2.7□□□□□ -1.98
PTPN6P29350 AC097462.2-201ENST00000504623 481 ntBASIC2.7□□□□□ -1.98
PTPN6P29350 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC2.7□□□□□ -1.98
PTPN6P29350 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC2.7□□□□□ -1.98
PTPN6P29350 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC2.7□□□□□ -1.98
PTPN6P29350 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
PTPN6P29350 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
PTPN6P29350 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.7□□□□□ -1.98
PTPN6P29350 AC093012.1-202ENST00000549403 582 ntBASIC2.7□□□□□ -1.98
PTPN6P29350 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.7□□□□□ -1.98
PTPN6P29350 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.7□□□□□ -1.98
PTPN6P29350 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.7□□□□□ -1.98
PTPN6P29350 AC010546.1-201ENST00000569391 485 ntBASIC2.7□□□□□ -1.98
PTPN6P29350 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
PTPN6P29350 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.7□□□□□ -1.98
PTPN6P29350 AC112187.2-201ENST00000604345 283 ntBASIC2.7□□□□□ -1.98
PTPN6P29350 AL627309.6-201ENST00000606857 840 ntBASIC2.7□□□□□ -1.98
PTPN6P29350 AC107214.2-201ENST00000608204 634 ntBASIC2.7□□□□□ -1.98
PTPN6P29350 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC2.7□□□□□ -1.98
PTPN6P29350 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.7□□□□□ -1.98
PTPN6P29350 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
PTPN6P29350 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.7□□□□□ -1.98
PTPN6P29350 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.7□□□□□ -1.98
PTPN6P29350 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms