Protein–RNA interactions for Protein: P29074

PTPN4, Tyrosine-protein phosphatase non-receptor type 4, humanhuman

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4P29074 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC2.84□□□□□ -1.95
PTPN4P29074 MIR4298-201ENST00000584380 73 ntBASIC2.84□□□□□ -1.95
PTPN4P29074 AC006023.1-201ENST00000603944 259 ntBASIC2.84□□□□□ -1.95
PTPN4P29074 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC2.84□□□□□ -1.95
PTPN4P29074 AL031667.3-201ENST00000620124 655 ntBASIC2.84□□□□□ -1.95
PTPN4P29074 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.83□□□□□ -1.96
PTPN4P29074 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
PTPN4P29074 OR5J1P-201ENST00000313544 939 ntBASIC2.83□□□□□ -1.96
PTPN4P29074 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
PTPN4P29074 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
PTPN4P29074 MIR512-1-201ENST00000384913 84 ntBASIC2.83□□□□□ -1.96
PTPN4P29074 UBE2V1P2-201ENST00000397758 440 ntBASIC2.83□□□□□ -1.96
PTPN4P29074 FO393413.1-201ENST00000402892 195 ntBASIC2.83□□□□□ -1.96
PTPN4P29074 TXNP7-201ENST00000406296 293 ntBASIC2.83□□□□□ -1.96
PTPN4P29074 AL359704.1-201ENST00000411586 781 ntBASIC2.83□□□□□ -1.96
PTPN4P29074 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.83□□□□□ -1.96
PTPN4P29074 Z85995.1-201ENST00000415547 335 ntBASIC2.83□□□□□ -1.96
PTPN4P29074 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC2.83□□□□□ -1.96
PTPN4P29074 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC2.83□□□□□ -1.96
PTPN4P29074 AC109583.1-201ENST00000432156 268 ntBASIC2.83□□□□□ -1.96
PTPN4P29074 RPL7P34-201ENST00000433316 712 ntBASIC2.83□□□□□ -1.96
PTPN4P29074 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC2.83□□□□□ -1.96
PTPN4P29074 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC2.83□□□□□ -1.96
PTPN4P29074 OR6C5P-201ENST00000452388 923 ntBASIC2.83□□□□□ -1.96
PTPN4P29074 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.83□□□□□ -1.96
PTPN4P29074 RNU7-23P-201ENST00000459465 62 ntBASIC2.83□□□□□ -1.96
PTPN4P29074 AC090525.1-201ENST00000479116 478 ntBASIC2.83□□□□□ -1.96
PTPN4P29074 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
PTPN4P29074 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC2.83□□□□□ -1.96
PTPN4P29074 SNORA9.3-201ENST00000516383 129 ntBASIC2.83□□□□□ -1.96
PTPN4P29074 RNA5SP367-201ENST00000516557 118 ntBASIC2.83□□□□□ -1.96
PTPN4P29074 RNU6-928P-201ENST00000516876 104 ntBASIC2.83□□□□□ -1.96
PTPN4P29074 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.83□□□□□ -1.96
PTPN4P29074 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC2.83□□□□□ -1.96
PTPN4P29074 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC2.83□□□□□ -1.96
PTPN4P29074 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC2.83□□□□□ -1.96
PTPN4P29074 AC060771.1-201ENST00000582031 164 ntBASIC2.83□□□□□ -1.96
PTPN4P29074 ELOCP29-201ENST00000588193 334 ntBASIC2.83□□□□□ -1.96
PTPN4P29074 AC005498.1-201ENST00000592125 465 ntBASIC2.83□□□□□ -1.96
PTPN4P29074 AC018638.7-201ENST00000605836 1114 ntBASIC2.83□□□□□ -1.96
PTPN4P29074 AL360219.1-201ENST00000610230 366 ntBASIC2.83□□□□□ -1.96
PTPN4P29074 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
PTPN4P29074 AC004696.1-201ENST00000614345 607 ntBASIC2.83□□□□□ -1.96
PTPN4P29074 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC2.83□□□□□ -1.96
PTPN4P29074 AC090132.2-201ENST00000615881 347 ntBASIC2.83□□□□□ -1.96
PTPN4P29074 AC120349.3-201ENST00000624377 529 ntBASIC2.83□□□□□ -1.96
PTPN4P29074 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
PTPN4P29074 AC007785.2-201ENST00000598627 1916 ntBASIC2.83□□□□□ -1.96
PTPN4P29074 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
PTPN4P29074 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.82□□□□□ -1.96
PTPN4P29074 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC2.82□□□□□ -1.96
PTPN4P29074 OR4G2P-202ENST00000641004 1759 ntBASIC2.82□□□□□ -1.96
PTPN4P29074 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
PTPN4P29074 RNU6-1180P-201ENST00000364935 107 ntBASIC2.82□□□□□ -1.96
PTPN4P29074 Y_RNA.302-201ENST00000364997 102 ntBASIC2.82□□□□□ -1.96
PTPN4P29074 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
PTPN4P29074 RNU6-851P-201ENST00000384565 107 ntBASIC2.82□□□□□ -1.96
PTPN4P29074 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
PTPN4P29074 RPL21P75-201ENST00000396599 483 ntBASIC2.82□□□□□ -1.96
PTPN4P29074 RPL21P28-201ENST00000401418 483 ntBASIC2.82□□□□□ -1.96
PTPN4P29074 AL592114.1-201ENST00000403842 483 ntBASIC2.82□□□□□ -1.96
PTPN4P29074 RPL7P8-201ENST00000411964 730 ntBASIC2.82□□□□□ -1.96
PTPN4P29074 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.82□□□□□ -1.96
PTPN4P29074 AC107081.1-201ENST00000414975 361 ntBASIC2.82□□□□□ -1.96
PTPN4P29074 MTND5P25-201ENST00000430499 799 ntBASIC2.82□□□□□ -1.96
PTPN4P29074 RSU1P2-202ENST00000437884 485 ntBASIC2.82□□□□□ -1.96
PTPN4P29074 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC2.82□□□□□ -1.96
PTPN4P29074 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.82□□□□□ -1.96
PTPN4P29074 CBWD4P-201ENST00000445695 655 ntBASIC2.82□□□□□ -1.96
PTPN4P29074 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC2.82□□□□□ -1.96
PTPN4P29074 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC2.82□□□□□ -1.96
PTPN4P29074 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC2.82□□□□□ -1.96
PTPN4P29074 AC087588.1-201ENST00000462203 316 ntBASIC2.82□□□□□ -1.96
PTPN4P29074 RPL21P39-201ENST00000463605 483 ntBASIC2.82□□□□□ -1.96
PTPN4P29074 RPS20P22-201ENST00000473700 357 ntBASIC2.82□□□□□ -1.96
PTPN4P29074 AC117440.1-201ENST00000474107 571 ntBASIC2.82□□□□□ -1.96
PTPN4P29074 RPS29P26-201ENST00000477483 171 ntBASIC2.82□□□□□ -1.96
PTPN4P29074 RPL21P93-201ENST00000480465 489 ntBASIC2.82□□□□□ -1.96
PTPN4P29074 AC233702.1-201ENST00000482905 502 ntBASIC2.82□□□□□ -1.96
PTPN4P29074 AC087190.1-201ENST00000484462 480 ntBASIC2.82□□□□□ -1.96
PTPN4P29074 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
PTPN4P29074 AC093591.1-201ENST00000491435 481 ntBASIC2.82□□□□□ -1.96
PTPN4P29074 RPL21P16-201ENST00000495531 483 ntBASIC2.82□□□□□ -1.96
PTPN4P29074 OR5BM1P-201ENST00000512021 366 ntBASIC2.82□□□□□ -1.96
PTPN4P29074 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC2.82□□□□□ -1.96
PTPN4P29074 SCGB1D5P-201ENST00000515134 247 ntBASIC2.82□□□□□ -1.96
PTPN4P29074 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC2.82□□□□□ -1.96
PTPN4P29074 RNU6-1256P-201ENST00000516539 103 ntBASIC2.82□□□□□ -1.96
PTPN4P29074 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC2.82□□□□□ -1.96
PTPN4P29074 AP004247.1-201ENST00000531556 1289 ntBASIC2.82□□□□□ -1.96
PTPN4P29074 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC2.82□□□□□ -1.96
PTPN4P29074 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.82□□□□□ -1.96
PTPN4P29074 GTF3AP2-201ENST00000557014 266 ntBASIC2.82□□□□□ -1.96
PTPN4P29074 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC2.82□□□□□ -1.96
PTPN4P29074 NIFKP6-201ENST00000598115 845 ntBASIC2.82□□□□□ -1.96
PTPN4P29074 RPL12P50-201ENST00000603116 116 ntBASIC2.82□□□□□ -1.96
PTPN4P29074 AC013553.2-201ENST00000604244 589 ntBASIC2.82□□□□□ -1.96
PTPN4P29074 AL161729.4-201ENST00000604650 476 ntBASIC2.82□□□□□ -1.96
PTPN4P29074 OR2AS2P-201ENST00000606902 342 ntBASIC2.82□□□□□ -1.96
PTPN4P29074 AC103710.1-201ENST00000610003 901 ntBASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms