Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 MTCO1P24-201ENST00000515438 1558 ntBASIC5.33□□□□□ -1.56
RXRBP28702 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
RXRBP28702 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC5.33□□□□□ -1.56
RXRBP28702 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.33□□□□□ -1.56
RXRBP28702 AC244517.1-201ENST00000606030 2086 ntBASIC5.33□□□□□ -1.56
RXRBP28702 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RXRBP28702 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
RXRBP28702 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
RXRBP28702 RNA5SP307-201ENST00000362863 116 ntBASIC5.33□□□□□ -1.56
RXRBP28702 RNU6-82P-201ENST00000363970 107 ntBASIC5.33□□□□□ -1.56
RXRBP28702 RNU5A-8P-201ENST00000364102 114 ntBASIC5.33□□□□□ -1.56
RXRBP28702 Y_RNA.512-201ENST00000384518 102 ntBASIC5.33□□□□□ -1.56
RXRBP28702 MIR19A-201ENST00000384878 82 ntBASIC5.33□□□□□ -1.56
RXRBP28702 RNU6-1109P-201ENST00000391187 107 ntBASIC5.33□□□□□ -1.56
RXRBP28702 DSTNP4-201ENST00000399472 474 ntBASIC5.33□□□□□ -1.56
RXRBP28702 SNORA74C-2-201ENST00000411179 201 ntBASIC5.33□□□□□ -1.56
RXRBP28702 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC5.33□□□□□ -1.56
RXRBP28702 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC5.33□□□□□ -1.56
RXRBP28702 ARL5AP4-201ENST00000430731 512 ntBASIC5.33□□□□□ -1.56
RXRBP28702 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC5.33□□□□□ -1.56
RXRBP28702 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC5.33□□□□□ -1.56
RXRBP28702 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.33□□□□□ -1.56
RXRBP28702 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC5.33□□□□□ -1.56
RXRBP28702 TRBV26-201ENST00000456572 344 ntBASIC5.33□□□□□ -1.56
RXRBP28702 RNA5SP179-201ENST00000517284 121 ntBASIC5.33□□□□□ -1.56
RXRBP28702 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
RXRBP28702 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
RXRBP28702 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC5.33□□□□□ -1.56
RXRBP28702 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC5.33□□□□□ -1.56
RXRBP28702 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC5.33□□□□□ -1.56
RXRBP28702 OR11H5P-201ENST00000554039 926 ntBASIC5.33□□□□□ -1.56
RXRBP28702 DUSP12P1-201ENST00000612874 516 ntBASIC5.33□□□□□ -1.56
RXRBP28702 AC000123.2-201ENST00000623124 461 ntBASIC5.33□□□□□ -1.56
RXRBP28702 AC092608.2-201ENST00000624427 218 ntBASIC5.33□□□□□ -1.56
RXRBP28702 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
RXRBP28702 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC5.33□□□□□ -1.56
RXRBP28702 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC5.33□□□□□ -1.56
RXRBP28702 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
RXRBP28702 ZNF519P1-201ENST00000449011 1626 ntBASIC5.33□□□□□ -1.56
RXRBP28702 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RXRBP28702 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC5.32□□□□□ -1.56
RXRBP28702 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RXRBP28702 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC5.32□□□□□ -1.56
RXRBP28702 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RXRBP28702 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RXRBP28702 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RXRBP28702 AL024474.1-201ENST00000404655 591 ntBASIC5.32□□□□□ -1.56
RXRBP28702 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RXRBP28702 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RXRBP28702 DPH3P2-201ENST00000422618 250 ntBASIC5.32□□□□□ -1.56
RXRBP28702 PSMA6P3-201ENST00000428242 164 ntBASIC5.32□□□□□ -1.56
RXRBP28702 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RXRBP28702 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC5.32□□□□□ -1.56
RXRBP28702 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC5.32□□□□□ -1.56
RXRBP28702 AC005726.1-201ENST00000494679 427 ntBASIC5.32□□□□□ -1.56
RXRBP28702 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC5.32□□□□□ -1.56
RXRBP28702 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC5.32□□□□□ -1.56
RXRBP28702 RNU6-347P-201ENST00000516658 105 ntBASIC5.32□□□□□ -1.56
RXRBP28702 SCARNA14-201ENST00000516903 136 ntBASIC5.32□□□□□ -1.56
RXRBP28702 TRAPPC2P2-201ENST00000517589 409 ntBASIC5.32□□□□□ -1.56
RXRBP28702 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC5.32□□□□□ -1.56
RXRBP28702 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC5.32□□□□□ -1.56
RXRBP28702 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC5.32□□□□□ -1.56
RXRBP28702 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC5.32□□□□□ -1.56
RXRBP28702 AL137161.1-201ENST00000532231 390 ntBASIC5.32□□□□□ -1.56
RXRBP28702 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC5.32□□□□□ -1.56
RXRBP28702 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.32□□□□□ -1.56
RXRBP28702 AC024619.4-201ENST00000580924 316 ntBASIC5.32□□□□□ -1.56
RXRBP28702 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC5.32□□□□□ -1.56
RXRBP28702 AC016727.2-201ENST00000603988 621 ntBASIC5.32□□□□□ -1.56
RXRBP28702 YPEL5P2-201ENST00000605553 359 ntBASIC5.32□□□□□ -1.56
RXRBP28702 AL138726.1-201ENST00000614873 333 ntBASIC5.32□□□□□ -1.56
RXRBP28702 U2.1-201ENST00000618978 145 ntBASIC5.32□□□□□ -1.56
RXRBP28702 AC007546.2-201ENST00000623996 360 ntBASIC5.32□□□□□ -1.56
RXRBP28702 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC5.32□□□□□ -1.56
RXRBP28702 CYP3A51P-201ENST00000633513 256 ntBASIC5.32□□□□□ -1.56
RXRBP28702 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RXRBP28702 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.32□□□□□ -1.56
RXRBP28702 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
RXRBP28702 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC5.32□□□□□ -1.56
RXRBP28702 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RXRBP28702 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.32□□□□□ -1.56
RXRBP28702 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.32□□□□□ -1.56
RXRBP28702 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
RXRBP28702 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
RXRBP28702 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
RXRBP28702 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RXRBP28702 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
RXRBP28702 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
RXRBP28702 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
RXRBP28702 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RXRBP28702 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC5.31□□□□□ -1.56
RXRBP28702 RNU6-328P-201ENST00000390887 106 ntBASIC5.31□□□□□ -1.56
RXRBP28702 POLHP1-201ENST00000411806 470 ntBASIC5.31□□□□□ -1.56
RXRBP28702 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC5.31□□□□□ -1.56
RXRBP28702 OR2AH1P-201ENST00000425717 928 ntBASIC5.31□□□□□ -1.56
RXRBP28702 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC5.31□□□□□ -1.56
RXRBP28702 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RXRBP28702 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RXRBP28702 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms