Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 Y_RNA.89-201ENST00000363031 102 ntBASIC3.6□□□□□ -1.83
TNFSF4P23510 RNY3P3-201ENST00000363816 102 ntBASIC3.6□□□□□ -1.83
TNFSF4P23510 RNU6-884P-201ENST00000363889 107 ntBASIC3.6□□□□□ -1.83
TNFSF4P23510 RNU6-877P-201ENST00000383868 107 ntBASIC3.6□□□□□ -1.83
TNFSF4P23510 RNU6-198P-201ENST00000384258 104 ntBASIC3.6□□□□□ -1.83
TNFSF4P23510 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.6□□□□□ -1.83
TNFSF4P23510 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.6□□□□□ -1.83
TNFSF4P23510 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.6□□□□□ -1.83
TNFSF4P23510 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.6□□□□□ -1.83
TNFSF4P23510 AC007389.2-201ENST00000434630 306 ntBASIC3.6□□□□□ -1.83
TNFSF4P23510 BRK1P2-201ENST00000442875 223 ntBASIC3.6□□□□□ -1.83
TNFSF4P23510 RNU7-180P-201ENST00000459240 63 ntBASIC3.6□□□□□ -1.83
TNFSF4P23510 AC010618.1-201ENST00000469924 477 ntBASIC3.6□□□□□ -1.83
TNFSF4P23510 AC091167.1-201ENST00000492017 396 ntBASIC3.6□□□□□ -1.83
TNFSF4P23510 AC026979.1-201ENST00000492525 396 ntBASIC3.6□□□□□ -1.83
TNFSF4P23510 SNORD59.2-201ENST00000516873 68 ntBASIC3.6□□□□□ -1.83
TNFSF4P23510 SUMO2P20-201ENST00000520803 283 ntBASIC3.6□□□□□ -1.83
TNFSF4P23510 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC3.6□□□□□ -1.83
TNFSF4P23510 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.6□□□□□ -1.83
TNFSF4P23510 PARP1P2-201ENST00000556806 195 ntBASIC3.6□□□□□ -1.83
TNFSF4P23510 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.6□□□□□ -1.83
TNFSF4P23510 AC068135.2-201ENST00000569293 1028 ntBASIC3.6□□□□□ -1.83
TNFSF4P23510 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.6□□□□□ -1.83
TNFSF4P23510 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.6□□□□□ -1.83
TNFSF4P23510 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.6□□□□□ -1.83
TNFSF4P23510 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.6□□□□□ -1.83
TNFSF4P23510 NRBF2P5-201ENST00000603087 788 ntBASIC3.6□□□□□ -1.83
TNFSF4P23510 AC007014.2-201ENST00000615581 479 ntBASIC3.6□□□□□ -1.83
TNFSF4P23510 uc_338.34-201ENST00000617467 174 ntBASIC3.6□□□□□ -1.83
TNFSF4P23510 AC007546.1-201ENST00000619452 559 ntBASIC3.6□□□□□ -1.83
TNFSF4P23510 MIR8059-201ENST00000620427 81 ntBASIC3.6□□□□□ -1.83
TNFSF4P23510 AC010338.1-201ENST00000621823 717 ntBASIC3.6□□□□□ -1.83
TNFSF4P23510 U2.21-201ENST00000637295 81 ntBASIC3.6□□□□□ -1.83
TNFSF4P23510 AC016588.2-201ENST00000632484 3021 ntBASIC3.6□□□□□ -1.83
TNFSF4P23510 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
TNFSF4P23510 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.6□□□□□ -1.83
TNFSF4P23510 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
TNFSF4P23510 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
TNFSF4P23510 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
TNFSF4P23510 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
TNFSF4P23510 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
TNFSF4P23510 Y_RNA.256-201ENST00000364594 104 ntBASIC3.59□□□□□ -1.83
TNFSF4P23510 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.59□□□□□ -1.83
TNFSF4P23510 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC3.59□□□□□ -1.83
TNFSF4P23510 RNA5SP252-201ENST00000391131 119 ntBASIC3.59□□□□□ -1.83
TNFSF4P23510 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
TNFSF4P23510 NDUFS5P4-201ENST00000412983 318 ntBASIC3.59□□□□□ -1.83
TNFSF4P23510 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC3.59□□□□□ -1.83
TNFSF4P23510 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC3.59□□□□□ -1.83
TNFSF4P23510 HMGB1P9-201ENST00000429856 646 ntBASIC3.59□□□□□ -1.83
TNFSF4P23510 COX6B1P7-201ENST00000430845 235 ntBASIC3.59□□□□□ -1.83
TNFSF4P23510 BTF3P10-201ENST00000433415 495 ntBASIC3.59□□□□□ -1.83
TNFSF4P23510 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC3.59□□□□□ -1.83
TNFSF4P23510 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.59□□□□□ -1.83
TNFSF4P23510 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.59□□□□□ -1.83
TNFSF4P23510 MTATP6P7-201ENST00000453315 681 ntBASIC3.59□□□□□ -1.83
TNFSF4P23510 AC092989.1-201ENST00000481235 277 ntBASIC3.59□□□□□ -1.83
TNFSF4P23510 RN7SL691P-201ENST00000494487 301 ntBASIC3.59□□□□□ -1.83
TNFSF4P23510 RPL7P47-201ENST00000497299 556 ntBASIC3.59□□□□□ -1.83
TNFSF4P23510 RPL38P4-201ENST00000502376 214 ntBASIC3.59□□□□□ -1.83
TNFSF4P23510 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.59□□□□□ -1.83
TNFSF4P23510 AC099522.1-202ENST00000514718 367 ntBASIC3.59□□□□□ -1.83
TNFSF4P23510 RN7SKP122-201ENST00000515923 296 ntBASIC3.59□□□□□ -1.83
TNFSF4P23510 MRPL49P2-201ENST00000521066 465 ntBASIC3.59□□□□□ -1.83
TNFSF4P23510 MTND4P7-201ENST00000523876 130 ntBASIC3.59□□□□□ -1.83
TNFSF4P23510 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.59□□□□□ -1.83
TNFSF4P23510 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.59□□□□□ -1.83
TNFSF4P23510 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.59□□□□□ -1.83
TNFSF4P23510 MDM2-233ENST00000545204 398 ntTSL 5 BASIC3.59□□□□□ -1.83
TNFSF4P23510 AC063950.1-201ENST00000552036 308 ntBASIC3.59□□□□□ -1.83
TNFSF4P23510 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC3.59□□□□□ -1.83
TNFSF4P23510 AC106782.4-201ENST00000568264 210 ntBASIC3.59□□□□□ -1.83
TNFSF4P23510 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.59□□□□□ -1.83
TNFSF4P23510 MIR3138-201ENST00000585238 82 ntBASIC3.59□□□□□ -1.83
TNFSF4P23510 AC068944.2-201ENST00000610373 403 ntBASIC3.59□□□□□ -1.83
TNFSF4P23510 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
TNFSF4P23510 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC3.59□□□□□ -1.83
TNFSF4P23510 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
TNFSF4P23510 RIOK3P1-201ENST00000418778 1528 ntBASIC3.59□□□□□ -1.84
TNFSF4P23510 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
TNFSF4P23510 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.58□□□□□ -1.84
TNFSF4P23510 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
TNFSF4P23510 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.58□□□□□ -1.84
TNFSF4P23510 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
TNFSF4P23510 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.58□□□□□ -1.84
TNFSF4P23510 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
TNFSF4P23510 NACAP2-201ENST00000318548 624 ntBASIC3.58□□□□□ -1.84
TNFSF4P23510 RNU6-778P-201ENST00000363269 103 ntBASIC3.58□□□□□ -1.84
TNFSF4P23510 RNU6-371P-201ENST00000364283 108 ntBASIC3.58□□□□□ -1.84
TNFSF4P23510 SNORA70.2-201ENST00000364506 135 ntBASIC3.58□□□□□ -1.84
TNFSF4P23510 RNU6-534P-201ENST00000364877 106 ntBASIC3.58□□□□□ -1.84
TNFSF4P23510 RNU1-73P-201ENST00000383971 164 ntBASIC3.58□□□□□ -1.84
TNFSF4P23510 SNORA70C-201ENST00000384538 135 ntBASIC3.58□□□□□ -1.84
TNFSF4P23510 RNU6-1127P-201ENST00000384580 107 ntBASIC3.58□□□□□ -1.84
TNFSF4P23510 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
TNFSF4P23510 MTHFD2P2-201ENST00000407725 247 ntBASIC3.58□□□□□ -1.84
TNFSF4P23510 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC3.58□□□□□ -1.84
TNFSF4P23510 AC098614.2-201ENST00000426040 255 ntBASIC3.58□□□□□ -1.84
TNFSF4P23510 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.58□□□□□ -1.84
TNFSF4P23510 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms