Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 RNU6-1137P-201ENST00000517073 99 ntBASIC3.91□□□□□ -1.78
NR4A1P22736 RAB9BP1-201ENST00000519581 626 ntBASIC3.91□□□□□ -1.78
NR4A1P22736 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
NR4A1P22736 COX6CP5-201ENST00000527162 228 ntBASIC3.91□□□□□ -1.78
NR4A1P22736 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC3.91□□□□□ -1.78
NR4A1P22736 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC3.91□□□□□ -1.78
NR4A1P22736 CR383656.7-201ENST00000548164 174 ntBASIC3.91□□□□□ -1.78
NR4A1P22736 HMGB3P26-201ENST00000560051 582 ntBASIC3.91□□□□□ -1.78
NR4A1P22736 MIR4680-201ENST00000580906 66 ntBASIC3.91□□□□□ -1.78
NR4A1P22736 MIR3941-201ENST00000582572 103 ntBASIC3.91□□□□□ -1.78
NR4A1P22736 MIR5096-201ENST00000583713 70 ntBASIC3.91□□□□□ -1.78
NR4A1P22736 AC008521.1-201ENST00000587471 187 ntBASIC3.91□□□□□ -1.78
NR4A1P22736 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.91□□□□□ -1.78
NR4A1P22736 VN1R107P-201ENST00000601784 209 ntBASIC3.91□□□□□ -1.78
NR4A1P22736 AC006254.3-201ENST00000603353 884 ntBASIC3.91□□□□□ -1.78
NR4A1P22736 AL138889.2-201ENST00000603883 242 ntBASIC3.91□□□□□ -1.78
NR4A1P22736 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.91□□□□□ -1.78
NR4A1P22736 AC064801.1-201ENST00000612025 407 ntBASIC3.91□□□□□ -1.78
NR4A1P22736 AC008785.1-201ENST00000624475 456 ntBASIC3.91□□□□□ -1.78
NR4A1P22736 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC3.91□□□□□ -1.78
NR4A1P22736 AC015813.6-201ENST00000624409 5808 ntBASIC3.91□□□□□ -1.78
NR4A1P22736 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
NR4A1P22736 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.91□□□□□ -1.78
NR4A1P22736 AC025031.4-201ENST00000621248 3271 ntBASIC3.91□□□□□ -1.78
NR4A1P22736 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC3.91□□□□□ -1.78
NR4A1P22736 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.91□□□□□ -1.78
NR4A1P22736 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC3.91□□□□□ -1.78
NR4A1P22736 MTND4P1-201ENST00000457501 1466 ntBASIC3.91□□□□□ -1.78
NR4A1P22736 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
NR4A1P22736 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.91□□□□□ -1.78
NR4A1P22736 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC3.91□□□□□ -1.78
NR4A1P22736 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
NR4A1P22736 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.78
NR4A1P22736 TNPO1P3-201ENST00000436471 2662 ntBASIC3.9□□□□□ -1.78
NR4A1P22736 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC3.9□□□□□ -1.78
NR4A1P22736 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.78
NR4A1P22736 AL359893.1-201ENST00000447628 1580 ntBASIC3.9□□□□□ -1.78
NR4A1P22736 CPHL1P-201ENST00000461341 3407 ntBASIC3.9□□□□□ -1.78
NR4A1P22736 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.78
NR4A1P22736 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
NR4A1P22736 MIR423-201ENST00000362201 94 ntBASIC3.9□□□□□ -1.79
NR4A1P22736 SNORD3E-201ENST00000362899 217 ntBASIC3.9□□□□□ -1.79
NR4A1P22736 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
NR4A1P22736 RNU6-128P-201ENST00000383976 107 ntBASIC3.9□□□□□ -1.79
NR4A1P22736 MIR659-201ENST00000384963 97 ntBASIC3.9□□□□□ -1.79
NR4A1P22736 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
NR4A1P22736 RNU6-907P-201ENST00000390924 102 ntBASIC3.9□□□□□ -1.79
NR4A1P22736 MRPL42P3-201ENST00000401492 326 ntBASIC3.9□□□□□ -1.79
NR4A1P22736 MIR548F4-201ENST00000408515 105 ntBASIC3.9□□□□□ -1.79
NR4A1P22736 SNORA3C-201ENST00000408792 125 ntBASIC3.9□□□□□ -1.79
NR4A1P22736 RNU2-47P-201ENST00000410649 186 ntBASIC3.9□□□□□ -1.79
NR4A1P22736 Y_RNA.625-201ENST00000411256 107 ntBASIC3.9□□□□□ -1.79
NR4A1P22736 BX682237.1-201ENST00000415016 335 ntBASIC3.9□□□□□ -1.79
NR4A1P22736 TRAPPC2P10-201ENST00000415662 323 ntBASIC3.9□□□□□ -1.79
NR4A1P22736 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC3.9□□□□□ -1.79
NR4A1P22736 RPL7AP25-201ENST00000423357 805 ntBASIC3.9□□□□□ -1.79
NR4A1P22736 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.9□□□□□ -1.79
NR4A1P22736 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.9□□□□□ -1.79
NR4A1P22736 RPL23AP33-201ENST00000442301 452 ntBASIC3.9□□□□□ -1.79
NR4A1P22736 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.9□□□□□ -1.79
NR4A1P22736 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC3.9□□□□□ -1.79
NR4A1P22736 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.9□□□□□ -1.79
NR4A1P22736 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC3.9□□□□□ -1.79
NR4A1P22736 RN7SL481P-201ENST00000477764 299 ntBASIC3.9□□□□□ -1.79
NR4A1P22736 AC006517.1-201ENST00000480485 328 ntBASIC3.9□□□□□ -1.79
NR4A1P22736 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC3.9□□□□□ -1.79
NR4A1P22736 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.9□□□□□ -1.79
NR4A1P22736 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.9□□□□□ -1.79
NR4A1P22736 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.9□□□□□ -1.79
NR4A1P22736 AC005798.1-201ENST00000513715 387 ntBASIC3.9□□□□□ -1.79
NR4A1P22736 SNORA25.10-201ENST00000515926 124 ntBASIC3.9□□□□□ -1.79
NR4A1P22736 RNU6-1016P-201ENST00000516689 94 ntBASIC3.9□□□□□ -1.79
NR4A1P22736 RN7SKP277-201ENST00000516895 283 ntBASIC3.9□□□□□ -1.79
NR4A1P22736 RNA5SP143-201ENST00000516936 115 ntBASIC3.9□□□□□ -1.79
NR4A1P22736 RNU6-794P-201ENST00000517261 64 ntBASIC3.9□□□□□ -1.79
NR4A1P22736 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC3.9□□□□□ -1.79
NR4A1P22736 AC090115.3-201ENST00000553218 849 ntBASIC3.9□□□□□ -1.79
NR4A1P22736 MIR4716-201ENST00000579628 84 ntBASIC3.9□□□□□ -1.79
NR4A1P22736 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC3.9□□□□□ -1.79
NR4A1P22736 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC3.9□□□□□ -1.79
NR4A1P22736 AL031176.1-201ENST00000604554 466 ntBASIC3.9□□□□□ -1.79
NR4A1P22736 AC110741.2-201ENST00000605278 268 ntBASIC3.9□□□□□ -1.79
NR4A1P22736 AC009570.1-201ENST00000609599 745 ntBASIC3.9□□□□□ -1.79
NR4A1P22736 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC3.9□□□□□ -1.79
NR4A1P22736 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.9□□□□□ -1.79
NR4A1P22736 AL669831.3-213ENST00000636676 183 ntBASIC3.9□□□□□ -1.79
NR4A1P22736 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC3.9□□□□□ -1.79
NR4A1P22736 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.79
NR4A1P22736 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
NR4A1P22736 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
NR4A1P22736 DDX10P1-201ENST00000448545 1933 ntBASIC3.89□□□□□ -1.79
NR4A1P22736 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
NR4A1P22736 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.89□□□□□ -1.79
NR4A1P22736 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
NR4A1P22736 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
NR4A1P22736 Y_RNA.5-201ENST00000362334 102 ntBASIC3.89□□□□□ -1.79
NR4A1P22736 RNU6-562P-201ENST00000362731 107 ntBASIC3.89□□□□□ -1.79
NR4A1P22736 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
NR4A1P22736 RNU6-946P-201ENST00000383878 107 ntBASIC3.89□□□□□ -1.79
NR4A1P22736 SNORA75B-201ENST00000384053 137 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 152.9 ms