Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 OR4G2P-201ENST00000328113 903 ntBASIC0.83□□□□□ -2.28
VCANP13611 RNA5SP347-201ENST00000362445 119 ntBASIC0.83□□□□□ -2.28
VCANP13611 ATG12P2-201ENST00000456830 416 ntBASIC0.83□□□□□ -2.28
VCANP13611 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC0.83□□□□□ -2.28
VCANP13611 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC0.83□□□□□ -2.28
VCANP13611 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
VCANP13611 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC0.83□□□□□ -2.28
VCANP13611 AC074140.1-201ENST00000621617 208 ntBASIC0.83□□□□□ -2.28
VCANP13611 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.83□□□□□ -2.28
VCANP13611 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC0.83□□□□□ -2.28
VCANP13611 EFTUD1P2-201ENST00000514817 1603 ntBASIC0.83□□□□□ -2.28
VCANP13611 SNORA9.1-201ENST00000362412 131 ntBASIC0.83□□□□□ -2.28
VCANP13611 SNORA62.1-201ENST00000364287 154 ntBASIC0.83□□□□□ -2.28
VCANP13611 LSM1P1-201ENST00000438629 273 ntBASIC0.83□□□□□ -2.28
VCANP13611 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC0.83□□□□□ -2.28
VCANP13611 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC0.83□□□□□ -2.28
VCANP13611 RNU6-758P-201ENST00000516292 89 ntBASIC0.83□□□□□ -2.28
VCANP13611 AC017076.1-201ENST00000607613 578 ntBASIC0.83□□□□□ -2.28
VCANP13611 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC0.83□□□□□ -2.28
VCANP13611 DBF4P1-201ENST00000412976 1892 ntBASIC0.83□□□□□ -2.28
VCANP13611 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC0.83□□□□□ -2.28
VCANP13611 MIR150-201ENST00000385048 84 ntBASIC0.83□□□□□ -2.28
VCANP13611 Y_RNA.700-201ENST00000516806 100 ntBASIC0.83□□□□□ -2.28
VCANP13611 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC0.83□□□□□ -2.28
VCANP13611 ZNF702P-202ENST00000434269 1966 ntBASIC0.82□□□□□ -2.28
VCANP13611 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC0.82□□□□□ -2.28
VCANP13611 RNU2-70P-201ENST00000410718 179 ntBASIC0.82□□□□□ -2.28
VCANP13611 AL591704.2-201ENST00000421658 181 ntBASIC0.82□□□□□ -2.28
VCANP13611 MORF4L1P7-201ENST00000426038 703 ntBASIC0.82□□□□□ -2.28
VCANP13611 RPS29P28-201ENST00000446439 141 ntBASIC0.82□□□□□ -2.28
VCANP13611 AL136380.1-201ENST00000447970 162 ntBASIC0.82□□□□□ -2.28
VCANP13611 RNA5SP309-201ENST00000516670 106 ntBASIC0.82□□□□□ -2.28
VCANP13611 SNORA48.11-201ENST00000517015 89 ntBASIC0.82□□□□□ -2.28
VCANP13611 VTA1P2-201ENST00000520205 911 ntBASIC0.82□□□□□ -2.28
VCANP13611 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC0.82□□□□□ -2.28
VCANP13611 OR8X1P-201ENST00000534542 869 ntBASIC0.82□□□□□ -2.28
VCANP13611 EIF4A1P12-201ENST00000551910 141 ntBASIC0.82□□□□□ -2.28
VCANP13611 HMGN1P30-201ENST00000589286 268 ntBASIC0.82□□□□□ -2.28
VCANP13611 AC068620.3-201ENST00000602749 560 ntBASIC0.82□□□□□ -2.28
VCANP13611 uc_338.14-201ENST00000613162 166 ntBASIC0.82□□□□□ -2.28
VCANP13611 AC009812.4-201ENST00000569134 1805 ntBASIC0.82□□□□□ -2.28
VCANP13611 IL33-203ENST00000456383 2501 ntTSL 5 BASIC0.82□□□□□ -2.28
VCANP13611 RNU6-48P-201ENST00000384161 107 ntBASIC0.82□□□□□ -2.28
VCANP13611 AL627224.1-201ENST00000448334 444 ntBASIC0.82□□□□□ -2.28
VCANP13611 LIAS-206ENST00000513731 826 ntTSL 5 BASIC0.82□□□□□ -2.28
VCANP13611 SNORA31.25-201ENST00000517242 134 ntBASIC0.82□□□□□ -2.28
VCANP13611 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC0.82□□□□□ -2.28
VCANP13611 AC090897.2-201ENST00000581715 130 ntBASIC0.82□□□□□ -2.28
VCANP13611 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC0.82□□□□□ -2.28
VCANP13611 ARF4P4-201ENST00000439608 520 ntBASIC0.82□□□□□ -2.28
VCANP13611 RNU6-351P-201ENST00000516097 100 ntBASIC0.82□□□□□ -2.28
VCANP13611 RNU6-496P-201ENST00000516145 99 ntBASIC0.82□□□□□ -2.28
VCANP13611 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC0.82□□□□□ -2.28
VCANP13611 FAM106CP-201ENST00000582212 507 ntBASIC0.82□□□□□ -2.28
VCANP13611 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC0.82□□□□□ -2.28
VCANP13611 AP000654.2-201ENST00000605633 586 ntBASIC0.82□□□□□ -2.28
VCANP13611 AC048347.1-201ENST00000624621 427 ntBASIC0.82□□□□□ -2.28
VCANP13611 SNORD114-2-201ENST00000363953 78 ntBASIC0.81□□□□□ -2.28
VCANP13611 HMGB1P13-201ENST00000406019 642 ntBASIC0.81□□□□□ -2.28
VCANP13611 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC0.81□□□□□ -2.28
VCANP13611 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC0.81□□□□□ -2.28
VCANP13611 UBE2L4-201ENST00000587688 464 ntBASIC0.81□□□□□ -2.28
VCANP13611 AP001005.3-201ENST00000622049 129 ntBASIC0.81□□□□□ -2.28
VCANP13611 MTND4P27-201ENST00000450813 1354 ntBASIC0.81□□□□□ -2.28
VCANP13611 RNU1-62P-201ENST00000362599 164 ntBASIC0.81□□□□□ -2.28
VCANP13611 RPS20P15-201ENST00000412792 311 ntBASIC0.81□□□□□ -2.28
VCANP13611 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC0.81□□□□□ -2.28
VCANP13611 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC0.81□□□□□ -2.28
VCANP13611 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC0.81□□□□□ -2.28
VCANP13611 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC0.81□□□□□ -2.28
VCANP13611 AC112503.2-201ENST00000609005 552 ntBASIC0.81□□□□□ -2.28
VCANP13611 AC243829.6-201ENST00000612652 106 ntBASIC0.81□□□□□ -2.28
VCANP13611 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC0.81□□□□□ -2.28
VCANP13611 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC0.8□□□□□ -2.28
VCANP13611 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC0.8□□□□□ -2.28
VCANP13611 CYP2C61P-201ENST00000604072 290 ntBASIC0.8□□□□□ -2.28
VCANP13611 AC068787.1-201ENST00000623908 691 ntBASIC0.8□□□□□ -2.28
VCANP13611 RNU6-1164P-201ENST00000364428 107 ntBASIC0.8□□□□□ -2.28
VCANP13611 AL161788.1-201ENST00000441805 169 ntBASIC0.8□□□□□ -2.28
VCANP13611 MTND6P13-201ENST00000443510 523 ntBASIC0.8□□□□□ -2.28
VCANP13611 OR4R1P-201ENST00000529879 463 ntBASIC0.8□□□□□ -2.28
VCANP13611 Y_RNA.757-201ENST00000578934 114 ntBASIC0.8□□□□□ -2.28
VCANP13611 OOSP1P2-201ENST00000579644 351 ntBASIC0.8□□□□□ -2.28
VCANP13611 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
VCANP13611 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC0.8□□□□□ -2.28
VCANP13611 SNRPGP12-201ENST00000449481 213 ntBASIC0.8□□□□□ -2.28
VCANP13611 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC0.8□□□□□ -2.28
VCANP13611 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC0.8□□□□□ -2.28
VCANP13611 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC0.8□□□□□ -2.28
VCANP13611 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC0.8□□□□□ -2.28
VCANP13611 AC010889.1-201ENST00000566193 2666 ntBASIC0.8□□□□□ -2.28
VCANP13611 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
VCANP13611 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC0.79□□□□□ -2.28
VCANP13611 RNU1-109P-201ENST00000383960 147 ntBASIC0.79□□□□□ -2.28
VCANP13611 RNU6-997P-201ENST00000384725 107 ntBASIC0.79□□□□□ -2.28
VCANP13611 RNU2-40P-201ENST00000410833 196 ntBASIC0.79□□□□□ -2.28
VCANP13611 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC0.79□□□□□ -2.28
VCANP13611 AC022493.1-201ENST00000492984 337 ntBASIC0.79□□□□□ -2.28
VCANP13611 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC0.79□□□□□ -2.28
VCANP13611 ATP6V0E1P3-201ENST00000420036 246 ntBASIC0.79□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms