Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 FRG1HP-204ENST00000617940 757 ntBASIC1.79□□□□□ -2.12
COL11A1P12107 AC018755.4-201ENST00000619715 454 ntBASIC1.79□□□□□ -2.12
COL11A1P12107 AC126544.2-201ENST00000625174 749 ntBASIC1.79□□□□□ -2.12
COL11A1P12107 AL590396.4-201ENST00000636779 956 ntBASIC1.79□□□□□ -2.12
COL11A1P12107 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
COL11A1P12107 AL391987.6-201ENST00000305671 199 ntBASIC1.78□□□□□ -2.12
COL11A1P12107 RNU6-1339P-201ENST00000363574 91 ntBASIC1.78□□□□□ -2.12
COL11A1P12107 RNU6-60P-201ENST00000364792 103 ntBASIC1.78□□□□□ -2.12
COL11A1P12107 RNU6-1180P-201ENST00000364935 107 ntBASIC1.78□□□□□ -2.12
COL11A1P12107 RNU6-730P-201ENST00000383954 104 ntBASIC1.78□□□□□ -2.12
COL11A1P12107 MIR620-201ENST00000385232 95 ntBASIC1.78□□□□□ -2.12
COL11A1P12107 SNORD65C-201ENST00000390962 71 ntBASIC1.78□□□□□ -2.12
COL11A1P12107 RNU6-174P-201ENST00000410406 106 ntBASIC1.78□□□□□ -2.12
COL11A1P12107 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC1.78□□□□□ -2.12
COL11A1P12107 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC1.78□□□□□ -2.12
COL11A1P12107 AC233728.2-201ENST00000425348 757 ntBASIC1.78□□□□□ -2.12
COL11A1P12107 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC1.78□□□□□ -2.12
COL11A1P12107 MTCYBP34-201ENST00000439552 670 ntBASIC1.78□□□□□ -2.12
COL11A1P12107 Z96811.1-201ENST00000445880 108 ntBASIC1.78□□□□□ -2.12
COL11A1P12107 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC1.78□□□□□ -2.12
COL11A1P12107 AC092798.1-201ENST00000458542 409 ntBASIC1.78□□□□□ -2.12
COL11A1P12107 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC1.78□□□□□ -2.12
COL11A1P12107 SETP11-201ENST00000473027 690 ntBASIC1.78□□□□□ -2.12
COL11A1P12107 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC1.78□□□□□ -2.12
COL11A1P12107 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC1.78□□□□□ -2.12
COL11A1P12107 AC104108.1-201ENST00000509930 412 ntBASIC1.78□□□□□ -2.12
COL11A1P12107 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC1.78□□□□□ -2.12
COL11A1P12107 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.78□□□□□ -2.12
COL11A1P12107 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC1.78□□□□□ -2.12
COL11A1P12107 ZNF849P-201ENST00000594711 1566 ntBASIC1.78□□□□□ -2.12
COL11A1P12107 AC091057.3-201ENST00000602684 733 ntBASIC1.78□□□□□ -2.12
COL11A1P12107 AL583856.2-201ENST00000606298 543 ntBASIC1.78□□□□□ -2.12
COL11A1P12107 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC1.78□□□□□ -2.12
COL11A1P12107 AC132825.7-201ENST00000638744 335 ntBASIC1.78□□□□□ -2.12
COL11A1P12107 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC1.78□□□□□ -2.12
COL11A1P12107 SNORA7.1-201ENST00000363750 139 ntBASIC1.77□□□□□ -2.13
COL11A1P12107 CD24P4-201ENST00000382840 243 ntBASIC1.77□□□□□ -2.13
COL11A1P12107 RNA5SP38-201ENST00000410750 119 ntBASIC1.77□□□□□ -2.13
COL11A1P12107 TAF13P2-201ENST00000416876 286 ntBASIC1.77□□□□□ -2.13
COL11A1P12107 AC106883.1-201ENST00000418805 562 ntBASIC1.77□□□□□ -2.13
COL11A1P12107 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC1.77□□□□□ -2.13
COL11A1P12107 AC013410.2-201ENST00000422627 201 ntBASIC1.77□□□□□ -2.13
COL11A1P12107 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC1.77□□□□□ -2.13
COL11A1P12107 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC1.77□□□□□ -2.13
COL11A1P12107 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC1.77□□□□□ -2.13
COL11A1P12107 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC1.77□□□□□ -2.13
COL11A1P12107 RPS15AP36-201ENST00000492022 382 ntBASIC1.77□□□□□ -2.13
COL11A1P12107 AC009901.1-201ENST00000506703 541 ntBASIC1.77□□□□□ -2.13
COL11A1P12107 SUMO2P5-201ENST00000506790 245 ntBASIC1.77□□□□□ -2.13
COL11A1P12107 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.77□□□□□ -2.13
COL11A1P12107 PRELID3BP4-201ENST00000515476 571 ntBASIC1.77□□□□□ -2.13
COL11A1P12107 AC021451.1-201ENST00000523498 1129 ntBASIC1.77□□□□□ -2.13
COL11A1P12107 AP000790.1-201ENST00000528891 737 ntBASIC1.77□□□□□ -2.13
COL11A1P12107 AC087894.1-201ENST00000538359 518 ntBASIC1.77□□□□□ -2.13
COL11A1P12107 MIR3912-201ENST00000577566 105 ntBASIC1.77□□□□□ -2.13
COL11A1P12107 MIR4509-3-201ENST00000578671 94 ntBASIC1.77□□□□□ -2.13
COL11A1P12107 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC1.77□□□□□ -2.13
COL11A1P12107 MIR4509-2-201ENST00000583920 94 ntBASIC1.77□□□□□ -2.13
COL11A1P12107 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC1.77□□□□□ -2.13
COL11A1P12107 AL512598.1-201ENST00000610158 273 ntBASIC1.77□□□□□ -2.13
COL11A1P12107 MIR4509-1-201ENST00000618224 94 ntBASIC1.77□□□□□ -2.13
COL11A1P12107 DUXAP9-208ENST00000622815 614 ntBASIC1.77□□□□□ -2.13
COL11A1P12107 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC1.77□□□□□ -2.13
COL11A1P12107 U6.107-201ENST00000637108 79 ntBASIC1.77□□□□□ -2.13
COL11A1P12107 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.77□□□□□ -2.13
COL11A1P12107 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
COL11A1P12107 SGO1P2-201ENST00000429458 1589 ntBASIC1.77□□□□□ -2.13
COL11A1P12107 RNY1P14-201ENST00000384426 108 ntBASIC1.77□□□□□ -2.13
COL11A1P12107 SNORD116-12-201ENST00000384468 92 ntBASIC1.77□□□□□ -2.13
COL11A1P12107 ANAPC10P1-201ENST00000395991 556 ntBASIC1.77□□□□□ -2.13
COL11A1P12107 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.77□□□□□ -2.13
COL11A1P12107 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC1.77□□□□□ -2.13
COL11A1P12107 MTCYBP15-201ENST00000433123 1127 ntBASIC1.77□□□□□ -2.13
COL11A1P12107 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.77□□□□□ -2.13
COL11A1P12107 MTND1P33-201ENST00000446251 917 ntBASIC1.77□□□□□ -2.13
COL11A1P12107 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC1.77□□□□□ -2.13
COL11A1P12107 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC1.77□□□□□ -2.13
COL11A1P12107 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
COL11A1P12107 AC104982.1-201ENST00000478775 574 ntBASIC1.77□□□□□ -2.13
COL11A1P12107 KLRA1P-201ENST00000503499 986 ntBASIC1.77□□□□□ -2.13
COL11A1P12107 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC1.77□□□□□ -2.13
COL11A1P12107 MTCO3P44-201ENST00000510977 541 ntBASIC1.77□□□□□ -2.13
COL11A1P12107 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC1.77□□□□□ -2.13
COL11A1P12107 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC1.77□□□□□ -2.13
COL11A1P12107 RNU6-1028P-201ENST00000517164 93 ntBASIC1.77□□□□□ -2.13
COL11A1P12107 MTCO3P15-201ENST00000526563 574 ntBASIC1.77□□□□□ -2.13
COL11A1P12107 AC118942.1-201ENST00000529674 1035 ntBASIC1.77□□□□□ -2.13
COL11A1P12107 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1.77□□□□□ -2.13
COL11A1P12107 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC1.77□□□□□ -2.13
COL11A1P12107 CYB5AP5-201ENST00000549779 389 ntBASIC1.77□□□□□ -2.13
COL11A1P12107 SNORD53B-201ENST00000577887 78 ntBASIC1.77□□□□□ -2.13
COL11A1P12107 OR4K8P-201ENST00000578842 1048 ntBASIC1.77□□□□□ -2.13
COL11A1P12107 AC090330.1-201ENST00000588646 764 ntBASIC1.77□□□□□ -2.13
COL11A1P12107 VN1R88P-201ENST00000596787 292 ntBASIC1.77□□□□□ -2.13
COL11A1P12107 DUXAP4-201ENST00000603046 613 ntBASIC1.77□□□□□ -2.13
COL11A1P12107 AC011458.1-201ENST00000604034 617 ntBASIC1.77□□□□□ -2.13
COL11A1P12107 BNIP3P4-201ENST00000604946 565 ntBASIC1.77□□□□□ -2.13
COL11A1P12107 AC104763.3-201ENST00000613765 618 ntBASIC1.77□□□□□ -2.13
COL11A1P12107 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC1.77□□□□□ -2.13
COL11A1P12107 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 124.6 ms