Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CD48P09326 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
CD48P09326 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.13□□□□□ -1.91
CD48P09326 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.13□□□□□ -1.91
CD48P09326 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.13□□□□□ -1.91
CD48P09326 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
CD48P09326 RNU6-114P-201ENST00000384704 105 ntBASIC3.13□□□□□ -1.91
CD48P09326 U3.19-201ENST00000390893 196 ntBASIC3.13□□□□□ -1.91
CD48P09326 RPS3AP36-201ENST00000398190 775 ntBASIC3.13□□□□□ -1.91
CD48P09326 CIR1P3-201ENST00000405137 479 ntBASIC3.13□□□□□ -1.91
CD48P09326 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.13□□□□□ -1.91
CD48P09326 AC092832.1-201ENST00000422934 400 ntBASIC3.13□□□□□ -1.91
CD48P09326 AC104850.1-201ENST00000435940 476 ntBASIC3.13□□□□□ -1.91
CD48P09326 NPM1P49-201ENST00000448027 714 ntBASIC3.13□□□□□ -1.91
CD48P09326 RPL37P4-201ENST00000448908 268 ntBASIC3.13□□□□□ -1.91
CD48P09326 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.13□□□□□ -1.91
CD48P09326 MTND1P12-201ENST00000455231 147 ntBASIC3.13□□□□□ -1.91
CD48P09326 RPL21P41-201ENST00000459863 264 ntBASIC3.13□□□□□ -1.91
CD48P09326 MTCO2P29-201ENST00000465212 189 ntBASIC3.13□□□□□ -1.91
CD48P09326 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC3.13□□□□□ -1.91
CD48P09326 AC008885.1-201ENST00000514930 301 ntBASIC3.13□□□□□ -1.91
CD48P09326 RNU6-314P-201ENST00000516574 104 ntBASIC3.13□□□□□ -1.91
CD48P09326 Vault.3-201ENST00000516676 95 ntBASIC3.13□□□□□ -1.91
CD48P09326 MTCYBP41-201ENST00000528913 1123 ntBASIC3.13□□□□□ -1.91
CD48P09326 AP000907.2-201ENST00000530827 353 ntBASIC3.13□□□□□ -1.91
CD48P09326 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.13□□□□□ -1.91
CD48P09326 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.13□□□□□ -1.91
CD48P09326 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.13□□□□□ -1.91
CD48P09326 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.13□□□□□ -1.91
CD48P09326 MIR3167-201ENST00000579623 85 ntBASIC3.13□□□□□ -1.91
CD48P09326 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC3.13□□□□□ -1.91
CD48P09326 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.13□□□□□ -1.91
CD48P09326 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.13□□□□□ -1.91
CD48P09326 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.13□□□□□ -1.91
CD48P09326 YPEL5P2-201ENST00000605553 359 ntBASIC3.13□□□□□ -1.91
CD48P09326 AC096577.2-201ENST00000611455 153 ntBASIC3.13□□□□□ -1.91
CD48P09326 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC3.13□□□□□ -1.91
CD48P09326 CR381653.2-201ENST00000624041 768 ntBASIC3.13□□□□□ -1.91
CD48P09326 MTND5P7-201ENST00000413558 1798 ntBASIC3.12□□□□□ -1.91
CD48P09326 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.12□□□□□ -1.91
CD48P09326 MTND5P3-201ENST00000438536 1800 ntBASIC3.12□□□□□ -1.91
CD48P09326 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.12□□□□□ -1.91
CD48P09326 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.12□□□□□ -1.91
CD48P09326 ANKRD36BP1-202ENST00000604892 1417 ntBASIC3.12□□□□□ -1.91
CD48P09326 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CD48P09326 MIR22-201ENST00000362190 85 ntBASIC3.12□□□□□ -1.91
CD48P09326 RNU5E-1-201ENST00000362477 120 ntBASIC3.12□□□□□ -1.91
CD48P09326 RNA5SP374-201ENST00000362939 125 ntBASIC3.12□□□□□ -1.91
CD48P09326 MTCO3P40-201ENST00000392516 676 ntBASIC3.12□□□□□ -1.91
CD48P09326 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.12□□□□□ -1.91
CD48P09326 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.12□□□□□ -1.91
CD48P09326 AC127391.1-201ENST00000411737 98 ntBASIC3.12□□□□□ -1.91
CD48P09326 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.12□□□□□ -1.91
CD48P09326 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC3.12□□□□□ -1.91
CD48P09326 AC133104.1-201ENST00000429100 218 ntBASIC3.12□□□□□ -1.91
CD48P09326 MTCO2P11-201ENST00000431069 680 ntBASIC3.12□□□□□ -1.91
CD48P09326 MRPS10P2-201ENST00000431226 381 ntBASIC3.12□□□□□ -1.91
CD48P09326 AL358934.1-201ENST00000432346 324 ntBASIC3.12□□□□□ -1.91
CD48P09326 CKS1BP5-201ENST00000434172 273 ntBASIC3.12□□□□□ -1.91
CD48P09326 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC3.12□□□□□ -1.91
CD48P09326 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
CD48P09326 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC3.12□□□□□ -1.91
CD48P09326 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.12□□□□□ -1.91
CD48P09326 C1DP4-201ENST00000455429 424 ntBASIC3.12□□□□□ -1.91
CD48P09326 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.12□□□□□ -1.91
CD48P09326 AC117440.1-201ENST00000474107 571 ntBASIC3.12□□□□□ -1.91
CD48P09326 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.12□□□□□ -1.91
CD48P09326 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC3.12□□□□□ -1.91
CD48P09326 AC019235.1-201ENST00000503847 207 ntBASIC3.12□□□□□ -1.91
CD48P09326 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.12□□□□□ -1.91
CD48P09326 AC010587.1-201ENST00000505809 469 ntBASIC3.12□□□□□ -1.91
CD48P09326 SNORA74D-201ENST00000516404 141 ntBASIC3.12□□□□□ -1.91
CD48P09326 RNU6-528P-201ENST00000516926 100 ntBASIC3.12□□□□□ -1.91
CD48P09326 AP001893.2-201ENST00000526949 202 ntBASIC3.12□□□□□ -1.91
CD48P09326 FAM92A1P1-201ENST00000528023 890 ntBASIC3.12□□□□□ -1.91
CD48P09326 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CD48P09326 CR383656.7-201ENST00000548164 174 ntBASIC3.12□□□□□ -1.91
CD48P09326 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC3.12□□□□□ -1.91
CD48P09326 KC877982.1-201ENST00000602313 470 ntBASIC3.12□□□□□ -1.91
CD48P09326 IGHV3-29-201ENST00000604817 344 ntBASIC3.12□□□□□ -1.91
CD48P09326 AC092954.2-201ENST00000609103 430 ntBASIC3.12□□□□□ -1.91
CD48P09326 AC017083.3-201ENST00000609955 700 ntBASIC3.12□□□□□ -1.91
CD48P09326 AL133173.2-201ENST00000614270 90 ntBASIC3.12□□□□□ -1.91
CD48P09326 U73479.1-201ENST00000618062 168 ntBASIC3.12□□□□□ -1.91
CD48P09326 AL359880.1-201ENST00000621879 266 ntBASIC3.12□□□□□ -1.91
CD48P09326 MIR6863-201ENST00000636112 90 ntBASIC3.12□□□□□ -1.91
CD48P09326 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.12□□□□□ -1.91
CD48P09326 AP001148.1-201ENST00000624124 2359 ntBASIC3.12□□□□□ -1.91
CD48P09326 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CD48P09326 AC244517.1-201ENST00000606030 2086 ntBASIC3.12□□□□□ -1.91
CD48P09326 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.11□□□□□ -1.91
CD48P09326 AL353743.1-202ENST00000431724 1695 ntBASIC3.11□□□□□ -1.91
CD48P09326 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
CD48P09326 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
CD48P09326 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
CD48P09326 OR5J1P-201ENST00000313544 939 ntBASIC3.11□□□□□ -1.91
CD48P09326 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
CD48P09326 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CD48P09326 RNU6-1283P-201ENST00000365314 105 ntBASIC3.11□□□□□ -1.91
CD48P09326 SNORA9-201ENST00000384215 133 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms