Protein–RNA interactions for Protein: P09001

MRPL3, 39S ribosomal protein L3, mitochondrial, humanhuman

Known RBP Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL3P09001 RPL31P41-201ENST00000477967 372 ntBASIC2.2□□□□□ -2.06
MRPL3P09001 LINC00888-204ENST00000487386 421 ntBASIC2.2□□□□□ -2.06
MRPL3P09001 AC010486.2-201ENST00000505572 483 ntBASIC2.2□□□□□ -2.06
MRPL3P09001 AC096725.1-201ENST00000514266 313 ntBASIC2.2□□□□□ -2.06
MRPL3P09001 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.2□□□□□ -2.06
MRPL3P09001 RNU6-528P-201ENST00000516926 100 ntBASIC2.2□□□□□ -2.06
MRPL3P09001 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC2.2□□□□□ -2.06
MRPL3P09001 DEFB108D-201ENST00000527787 222 ntBASIC2.2□□□□□ -2.06
MRPL3P09001 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC2.2□□□□□ -2.06
MRPL3P09001 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC2.2□□□□□ -2.06
MRPL3P09001 AC090615.1-201ENST00000577519 154 ntBASIC2.2□□□□□ -2.06
MRPL3P09001 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC2.2□□□□□ -2.06
MRPL3P09001 AC105224.1-201ENST00000587055 421 ntBASIC2.2□□□□□ -2.06
MRPL3P09001 AL451007.1-201ENST00000595491 289 ntBASIC2.2□□□□□ -2.06
MRPL3P09001 CLPTM1LP1-201ENST00000604519 484 ntBASIC2.2□□□□□ -2.06
MRPL3P09001 RNU6-88P-201ENST00000606801 100 ntBASIC2.2□□□□□ -2.06
MRPL3P09001 AC103710.4-201ENST00000609301 899 ntBASIC2.2□□□□□ -2.06
MRPL3P09001 AC104237.2-201ENST00000612456 443 ntBASIC2.2□□□□□ -2.06
MRPL3P09001 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
MRPL3P09001 AC091304.6-201ENST00000619761 202 ntBASIC2.2□□□□□ -2.06
MRPL3P09001 AC002550.2-201ENST00000621246 394 ntBASIC2.2□□□□□ -2.06
MRPL3P09001 PCMTD1P7-201ENST00000634506 357 ntBASIC2.2□□□□□ -2.06
MRPL3P09001 OR5H6-203ENST00000642105 978 ntBASIC2.2□□□□□ -2.06
MRPL3P09001 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
MRPL3P09001 ZNF271P-202ENST00000465539 1970 ntBASIC2.19□□□□□ -2.06
MRPL3P09001 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
MRPL3P09001 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.19□□□□□ -2.06
MRPL3P09001 RNU6-769P-201ENST00000384407 104 ntBASIC2.19□□□□□ -2.06
MRPL3P09001 AF228730.1-201ENST00000397972 663 ntBASIC2.19□□□□□ -2.06
MRPL3P09001 AL139039.1-201ENST00000401900 692 ntBASIC2.19□□□□□ -2.06
MRPL3P09001 AL356421.1-201ENST00000403255 413 ntBASIC2.19□□□□□ -2.06
MRPL3P09001 AL139095.1-201ENST00000404326 391 ntBASIC2.19□□□□□ -2.06
MRPL3P09001 RNU2-52P-201ENST00000410680 190 ntBASIC2.19□□□□□ -2.06
MRPL3P09001 RNU4-72P-201ENST00000410754 173 ntBASIC2.19□□□□□ -2.06
MRPL3P09001 RNU2-25P-201ENST00000411041 191 ntBASIC2.19□□□□□ -2.06
MRPL3P09001 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.19□□□□□ -2.06
MRPL3P09001 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC2.19□□□□□ -2.06
MRPL3P09001 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC2.19□□□□□ -2.06
MRPL3P09001 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.19□□□□□ -2.06
MRPL3P09001 ARL5AP4-201ENST00000430731 512 ntBASIC2.19□□□□□ -2.06
MRPL3P09001 MTATP6P17-201ENST00000431030 672 ntBASIC2.19□□□□□ -2.06
MRPL3P09001 OR4K11P-201ENST00000431829 904 ntBASIC2.19□□□□□ -2.06
MRPL3P09001 UBE2FP3-201ENST00000436366 524 ntBASIC2.19□□□□□ -2.06
MRPL3P09001 SNRPEP7-201ENST00000438350 220 ntBASIC2.19□□□□□ -2.06
MRPL3P09001 DDX3P2-201ENST00000446138 111 ntBASIC2.19□□□□□ -2.06
MRPL3P09001 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.19□□□□□ -2.06
MRPL3P09001 WASF1P1-201ENST00000447560 1131 ntBASIC2.19□□□□□ -2.06
MRPL3P09001 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC2.19□□□□□ -2.06
MRPL3P09001 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.19□□□□□ -2.06
MRPL3P09001 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.19□□□□□ -2.06
MRPL3P09001 AC092798.1-201ENST00000458542 409 ntBASIC2.19□□□□□ -2.06
MRPL3P09001 SNORD109B-201ENST00000458961 67 ntBASIC2.19□□□□□ -2.06
MRPL3P09001 SNORD109A-201ENST00000459128 67 ntBASIC2.19□□□□□ -2.06
MRPL3P09001 AP000852.1-201ENST00000472460 573 ntBASIC2.19□□□□□ -2.06
MRPL3P09001 RPL30P5-201ENST00000494923 336 ntBASIC2.19□□□□□ -2.06
MRPL3P09001 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC2.19□□□□□ -2.06
MRPL3P09001 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC2.19□□□□□ -2.06
MRPL3P09001 MRPS36P2-201ENST00000512569 299 ntBASIC2.19□□□□□ -2.06
MRPL3P09001 RN7SKP132-201ENST00000516001 208 ntBASIC2.19□□□□□ -2.06
MRPL3P09001 RNA5SP402-201ENST00000517148 110 ntBASIC2.19□□□□□ -2.06
MRPL3P09001 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC2.19□□□□□ -2.06
MRPL3P09001 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC2.19□□□□□ -2.06
MRPL3P09001 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
MRPL3P09001 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.19□□□□□ -2.06
MRPL3P09001 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.19□□□□□ -2.06
MRPL3P09001 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
MRPL3P09001 AC002400.1-201ENST00000569310 726 ntBASIC2.19□□□□□ -2.06
MRPL3P09001 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC2.19□□□□□ -2.06
MRPL3P09001 TPMTP1-201ENST00000592307 737 ntBASIC2.19□□□□□ -2.06
MRPL3P09001 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC2.19□□□□□ -2.06
MRPL3P09001 AC004987.4-201ENST00000603383 338 ntBASIC2.19□□□□□ -2.06
MRPL3P09001 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
MRPL3P09001 AC107214.2-201ENST00000608204 634 ntBASIC2.19□□□□□ -2.06
MRPL3P09001 AC245517.5-201ENST00000611529 162 ntBASIC2.19□□□□□ -2.06
MRPL3P09001 AC004223.4-201ENST00000612426 332 ntBASIC2.19□□□□□ -2.06
MRPL3P09001 AC022079.1-201ENST00000621546 602 ntBASIC2.19□□□□□ -2.06
MRPL3P09001 AC079248.2-201ENST00000623779 326 ntBASIC2.19□□□□□ -2.06
MRPL3P09001 AC099063.3-201ENST00000642066 185 ntBASIC2.19□□□□□ -2.06
MRPL3P09001 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC2.19□□□□□ -2.06
MRPL3P09001 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
MRPL3P09001 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
MRPL3P09001 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
MRPL3P09001 AC092447.10-201ENST00000620607 1652 ntBASIC2.18□□□□□ -2.06
MRPL3P09001 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
MRPL3P09001 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.18□□□□□ -2.06
MRPL3P09001 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.18□□□□□ -2.06
MRPL3P09001 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC2.18□□□□□ -2.06
MRPL3P09001 AL161781.1-201ENST00000354277 403 ntBASIC2.18□□□□□ -2.06
MRPL3P09001 MIR21-201ENST00000362134 72 ntBASIC2.18□□□□□ -2.06
MRPL3P09001 Y_RNA.97-201ENST00000363094 102 ntBASIC2.18□□□□□ -2.06
MRPL3P09001 RNU1-105P-201ENST00000363470 161 ntBASIC2.18□□□□□ -2.06
MRPL3P09001 RNA5SP456-201ENST00000364002 114 ntBASIC2.18□□□□□ -2.06
MRPL3P09001 SNORD46.1-201ENST00000364139 104 ntBASIC2.18□□□□□ -2.06
MRPL3P09001 RNU6-359P-201ENST00000365466 108 ntBASIC2.18□□□□□ -2.06
MRPL3P09001 RNU6-253P-201ENST00000384730 105 ntBASIC2.18□□□□□ -2.06
MRPL3P09001 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
MRPL3P09001 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
MRPL3P09001 MIR320C1-201ENST00000408566 88 ntBASIC2.18□□□□□ -2.06
MRPL3P09001 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC2.18□□□□□ -2.06
MRPL3P09001 BEND7P1-201ENST00000422058 457 ntBASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 115.2 ms