Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC1.72□□□□□ -2.13
COL4A2P08572 RNU6-216P-201ENST00000363282 104 ntBASIC1.71□□□□□ -2.13
COL4A2P08572 SUGT1P1-201ENST00000379514 476 ntBASIC1.71□□□□□ -2.13
COL4A2P08572 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.71□□□□□ -2.13
COL4A2P08572 BTF3P8-201ENST00000414577 526 ntBASIC1.71□□□□□ -2.13
COL4A2P08572 TMEM167AP1-201ENST00000423409 219 ntBASIC1.71□□□□□ -2.13
COL4A2P08572 UBE2D3P2-201ENST00000424409 445 ntBASIC1.71□□□□□ -2.13
COL4A2P08572 SEPT7P5-201ENST00000434048 306 ntBASIC1.71□□□□□ -2.13
COL4A2P08572 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC1.71□□□□□ -2.13
COL4A2P08572 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.71□□□□□ -2.13
COL4A2P08572 AC017099.1-201ENST00000448261 1028 ntBASIC1.71□□□□□ -2.13
COL4A2P08572 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC1.71□□□□□ -2.13
COL4A2P08572 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC1.71□□□□□ -2.13
COL4A2P08572 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC1.71□□□□□ -2.13
COL4A2P08572 SNORD59.2-201ENST00000516873 68 ntBASIC1.71□□□□□ -2.13
COL4A2P08572 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC1.71□□□□□ -2.13
COL4A2P08572 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC1.71□□□□□ -2.13
COL4A2P08572 MIR4419B-201ENST00000577260 68 ntBASIC1.71□□□□□ -2.13
COL4A2P08572 MIR4446-201ENST00000578505 67 ntBASIC1.71□□□□□ -2.13
COL4A2P08572 MIR3935-201ENST00000583472 104 ntBASIC1.71□□□□□ -2.13
COL4A2P08572 AC004987.4-201ENST00000603383 338 ntBASIC1.71□□□□□ -2.13
COL4A2P08572 AC091946.2-201ENST00000606105 291 ntBASIC1.71□□□□□ -2.13
COL4A2P08572 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.71□□□□□ -2.14
COL4A2P08572 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC1.71□□□□□ -2.14
COL4A2P08572 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.71□□□□□ -2.14
COL4A2P08572 Y_RNA.25-201ENST00000362528 102 ntBASIC1.71□□□□□ -2.14
COL4A2P08572 SNORA63.3-201ENST00000362682 132 ntBASIC1.71□□□□□ -2.14
COL4A2P08572 Y_RNA.116-201ENST00000363292 103 ntBASIC1.71□□□□□ -2.14
COL4A2P08572 RNU6-839P-201ENST00000363347 108 ntBASIC1.71□□□□□ -2.14
COL4A2P08572 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
COL4A2P08572 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
COL4A2P08572 MCTS2P-201ENST00000394552 546 ntBASIC1.71□□□□□ -2.14
COL4A2P08572 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
COL4A2P08572 RNU6-1077P-201ENST00000410506 102 ntBASIC1.71□□□□□ -2.14
COL4A2P08572 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.71□□□□□ -2.14
COL4A2P08572 SSXP9-201ENST00000417503 292 ntBASIC1.71□□□□□ -2.14
COL4A2P08572 HSPE1P1-201ENST00000421494 318 ntBASIC1.71□□□□□ -2.14
COL4A2P08572 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC1.71□□□□□ -2.14
COL4A2P08572 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC1.71□□□□□ -2.14
COL4A2P08572 AC245517.4-201ENST00000448601 281 ntBASIC1.71□□□□□ -2.14
COL4A2P08572 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC1.71□□□□□ -2.14
COL4A2P08572 AL353691.1-201ENST00000451332 387 ntBASIC1.71□□□□□ -2.14
COL4A2P08572 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.71□□□□□ -2.14
COL4A2P08572 AC104164.3-201ENST00000467363 1258 ntBASIC1.71□□□□□ -2.14
COL4A2P08572 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC1.71□□□□□ -2.14
COL4A2P08572 CBX3P3-201ENST00000508108 532 ntBASIC1.71□□□□□ -2.14
COL4A2P08572 RNU6-1261P-201ENST00000517194 104 ntBASIC1.71□□□□□ -2.14
COL4A2P08572 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC1.71□□□□□ -2.14
COL4A2P08572 LRRC6P1-201ENST00000532188 885 ntBASIC1.71□□□□□ -2.14
COL4A2P08572 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC1.71□□□□□ -2.14
COL4A2P08572 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC1.71□□□□□ -2.14
COL4A2P08572 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC1.71□□□□□ -2.14
COL4A2P08572 AP002802.2-201ENST00000605877 235 ntBASIC1.71□□□□□ -2.14
COL4A2P08572 AL592148.2-201ENST00000612210 372 ntBASIC1.71□□□□□ -2.14
COL4A2P08572 AC008083.4-201ENST00000615076 444 ntBASIC1.71□□□□□ -2.14
COL4A2P08572 AC006249.1-201ENST00000621223 471 ntBASIC1.71□□□□□ -2.14
COL4A2P08572 AC004009.2-201ENST00000623016 728 ntBASIC1.71□□□□□ -2.14
COL4A2P08572 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.7□□□□□ -2.14
COL4A2P08572 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
COL4A2P08572 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC1.7□□□□□ -2.14
COL4A2P08572 SNRPEP3-201ENST00000338402 276 ntBASIC1.7□□□□□ -2.14
COL4A2P08572 DEFB108F-201ENST00000344638 222 ntBASIC1.7□□□□□ -2.14
COL4A2P08572 SNORA1.3-201ENST00000384676 136 ntBASIC1.7□□□□□ -2.14
COL4A2P08572 AL356131.1-201ENST00000405826 414 ntBASIC1.7□□□□□ -2.14
COL4A2P08572 AC004965.1-201ENST00000413033 213 ntBASIC1.7□□□□□ -2.14
COL4A2P08572 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC1.7□□□□□ -2.14
COL4A2P08572 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.7□□□□□ -2.14
COL4A2P08572 AL121871.1-201ENST00000443413 436 ntBASIC1.7□□□□□ -2.14
COL4A2P08572 MTCYBP42-201ENST00000444653 1130 ntBASIC1.7□□□□□ -2.14
COL4A2P08572 RNA5SP310-201ENST00000459084 116 ntBASIC1.7□□□□□ -2.14
COL4A2P08572 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.7□□□□□ -2.14
COL4A2P08572 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
COL4A2P08572 Y_RNA.670-201ENST00000516255 105 ntBASIC1.7□□□□□ -2.14
COL4A2P08572 AC023632.1-201ENST00000518463 375 ntBASIC1.7□□□□□ -2.14
COL4A2P08572 DEFB108D-201ENST00000527787 222 ntBASIC1.7□□□□□ -2.14
COL4A2P08572 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC1.7□□□□□ -2.14
COL4A2P08572 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC1.7□□□□□ -2.14
COL4A2P08572 AC008507.2-201ENST00000588402 1176 ntBASIC1.7□□□□□ -2.14
COL4A2P08572 AC106791.2-201ENST00000604680 391 ntBASIC1.7□□□□□ -2.14
COL4A2P08572 uc_338.5-201ENST00000611839 155 ntBASIC1.7□□□□□ -2.14
COL4A2P08572 SNHG22-203ENST00000617833 660 ntBASIC1.7□□□□□ -2.14
COL4A2P08572 DUXAP9-208ENST00000622815 614 ntBASIC1.7□□□□□ -2.14
COL4A2P08572 AL356585.4-201ENST00000623078 1229 ntBASIC1.7□□□□□ -2.14
COL4A2P08572 SUCLA2P2-201ENST00000417269 1309 ntBASIC1.7□□□□□ -2.14
COL4A2P08572 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC1.7□□□□□ -2.14
COL4A2P08572 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
COL4A2P08572 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC1.69□□□□□ -2.14
COL4A2P08572 AL136520.1-201ENST00000600311 1322 ntBASIC1.69□□□□□ -2.14
COL4A2P08572 UBE2Q2P1-202ENST00000354771 883 ntBASIC1.69□□□□□ -2.14
COL4A2P08572 RNU6-799P-201ENST00000363567 107 ntBASIC1.69□□□□□ -2.14
COL4A2P08572 AC027644.1-201ENST00000419595 298 ntBASIC1.69□□□□□ -2.14
COL4A2P08572 DPRXP1-201ENST00000426312 460 ntBASIC1.69□□□□□ -2.14
COL4A2P08572 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC1.69□□□□□ -2.14
COL4A2P08572 TRIM60P18-201ENST00000441518 828 ntBASIC1.69□□□□□ -2.14
COL4A2P08572 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC1.69□□□□□ -2.14
COL4A2P08572 RPL39P6-201ENST00000448289 150 ntBASIC1.69□□□□□ -2.14
COL4A2P08572 AC244505.3-201ENST00000454598 187 ntBASIC1.69□□□□□ -2.14
COL4A2P08572 AL031183.1-201ENST00000457667 207 ntBASIC1.69□□□□□ -2.14
COL4A2P08572 PNPLA4P1-201ENST00000458328 305 ntBASIC1.69□□□□□ -2.14
COL4A2P08572 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 125.1 ms