Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 AC025588.4-201ENST00000615802 908 ntBASIC2.51□□□□□ -2.01
RETP07949 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.51□□□□□ -2.01
RETP07949 AC013470.4-201ENST00000619978 986 ntBASIC2.51□□□□□ -2.01
RETP07949 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC2.51□□□□□ -2.01
RETP07949 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
RETP07949 AC008669.1-201ENST00000565823 2178 ntBASIC2.51□□□□□ -2.01
RETP07949 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.5□□□□□ -2.01
RETP07949 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
RETP07949 SLC10A5P1-201ENST00000379063 1306 ntBASIC2.5□□□□□ -2.01
RETP07949 AC009812.4-201ENST00000569134 1805 ntBASIC2.5□□□□□ -2.01
RETP07949 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
RETP07949 Y_RNA.192-201ENST00000363977 102 ntBASIC2.5□□□□□ -2.01
RETP07949 RNU6-173P-201ENST00000364215 104 ntBASIC2.5□□□□□ -2.01
RETP07949 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.5□□□□□ -2.01
RETP07949 AL139421.1-201ENST00000423010 169 ntBASIC2.5□□□□□ -2.01
RETP07949 RPL7P37-201ENST00000425095 738 ntBASIC2.5□□□□□ -2.01
RETP07949 USP9YP11-201ENST00000427537 717 ntBASIC2.5□□□□□ -2.01
RETP07949 AC024082.2-201ENST00000434771 238 ntBASIC2.5□□□□□ -2.01
RETP07949 RPS12P2-201ENST00000439728 269 ntBASIC2.5□□□□□ -2.01
RETP07949 AC096638.1-201ENST00000444678 216 ntBASIC2.5□□□□□ -2.01
RETP07949 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC2.5□□□□□ -2.01
RETP07949 USP9YP25-201ENST00000457708 443 ntBASIC2.5□□□□□ -2.01
RETP07949 FAM172BP-201ENST00000487497 1089 ntBASIC2.5□□□□□ -2.01
RETP07949 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC2.5□□□□□ -2.01
RETP07949 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC2.5□□□□□ -2.01
RETP07949 AC090453.1-201ENST00000495560 436 ntBASIC2.5□□□□□ -2.01
RETP07949 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.5□□□□□ -2.01
RETP07949 AC234781.5-201ENST00000508429 271 ntBASIC2.5□□□□□ -2.01
RETP07949 XKRY-201ENST00000510392 1100 ntBASIC2.5□□□□□ -2.01
RETP07949 AC113155.1-201ENST00000511141 769 ntBASIC2.5□□□□□ -2.01
RETP07949 OR5BM1P-201ENST00000512021 366 ntBASIC2.5□□□□□ -2.01
RETP07949 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.5□□□□□ -2.01
RETP07949 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC2.5□□□□□ -2.01
RETP07949 RN7SKP265-201ENST00000516448 223 ntBASIC2.5□□□□□ -2.01
RETP07949 AC022861.1-201ENST00000522981 663 ntBASIC2.5□□□□□ -2.01
RETP07949 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC2.5□□□□□ -2.01
RETP07949 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
RETP07949 OR11H5P-201ENST00000554039 926 ntBASIC2.5□□□□□ -2.01
RETP07949 HIGD1AP17-201ENST00000554576 276 ntBASIC2.5□□□□□ -2.01
RETP07949 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.5□□□□□ -2.01
RETP07949 MIR5092-201ENST00000583139 88 ntBASIC2.5□□□□□ -2.01
RETP07949 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC2.5□□□□□ -2.01
RETP07949 HSPE1P7-201ENST00000604681 321 ntBASIC2.5□□□□□ -2.01
RETP07949 AL355816.2-201ENST00000610049 647 ntBASIC2.5□□□□□ -2.01
RETP07949 AC109809.1-201ENST00000619665 545 ntBASIC2.5□□□□□ -2.01
RETP07949 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC2.5□□□□□ -2.01
RETP07949 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
RETP07949 AC131280.1-202ENST00000624067 4211 ntBASIC2.5□□□□□ -2.01
RETP07949 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
RETP07949 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.49□□□□□ -2.01
RETP07949 AC002543.1-201ENST00000299783 1954 ntBASIC2.49□□□□□ -2.01
RETP07949 ATP8A2P3-201ENST00000426792 1536 ntBASIC2.49□□□□□ -2.01
RETP07949 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC2.49□□□□□ -2.01
RETP07949 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
RETP07949 SET-203ENST00000372688 801 ntTSL 2 BASIC2.49□□□□□ -2.01
RETP07949 AL359511.1-201ENST00000402970 211 ntBASIC2.49□□□□□ -2.01
RETP07949 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.49□□□□□ -2.01
RETP07949 ELOCP9-201ENST00000418624 239 ntBASIC2.49□□□□□ -2.01
RETP07949 THAP5P1-201ENST00000439089 262 ntBASIC2.49□□□□□ -2.01
RETP07949 AC011816.1-201ENST00000441346 546 ntBASIC2.49□□□□□ -2.01
RETP07949 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC2.49□□□□□ -2.01
RETP07949 Z73417.1-201ENST00000447373 778 ntBASIC2.49□□□□□ -2.01
RETP07949 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.49□□□□□ -2.01
RETP07949 RPL31P60-201ENST00000478450 367 ntBASIC2.49□□□□□ -2.01
RETP07949 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.49□□□□□ -2.01
RETP07949 RPS27P27-201ENST00000498779 255 ntBASIC2.49□□□□□ -2.01
RETP07949 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.49□□□□□ -2.01
RETP07949 RNU6-583P-201ENST00000516012 92 ntBASIC2.49□□□□□ -2.01
RETP07949 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.49□□□□□ -2.01
RETP07949 IGLV3-17-201ENST00000519099 244 ntBASIC2.49□□□□□ -2.01
RETP07949 AC121758.2-201ENST00000553271 193 ntBASIC2.49□□□□□ -2.01
RETP07949 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC2.49□□□□□ -2.01
RETP07949 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC2.49□□□□□ -2.01
RETP07949 NRBF2P1-201ENST00000587407 859 ntBASIC2.49□□□□□ -2.01
RETP07949 DUXAP11-201ENST00000603858 526 ntBASIC2.49□□□□□ -2.01
RETP07949 AC004853.1-201ENST00000604902 698 ntBASIC2.49□□□□□ -2.01
RETP07949 AC069304.2-201ENST00000605154 435 ntBASIC2.49□□□□□ -2.01
RETP07949 AC016727.1-205ENST00000605437 569 ntBASIC2.49□□□□□ -2.01
RETP07949 AC013244.3-201ENST00000605614 388 ntBASIC2.49□□□□□ -2.01
RETP07949 AC007349.4-201ENST00000608114 532 ntBASIC2.49□□□□□ -2.01
RETP07949 AC008993.2-201ENST00000631744 806 ntBASIC2.49□□□□□ -2.01
RETP07949 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.49□□□□□ -2.01
RETP07949 AC104454.1-201ENST00000421341 1401 ntBASIC2.49□□□□□ -2.01
RETP07949 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.48□□□□□ -2.01
RETP07949 RNU6-343P-201ENST00000364709 104 ntBASIC2.48□□□□□ -2.01
RETP07949 RNU6-193P-201ENST00000410977 107 ntBASIC2.48□□□□□ -2.01
RETP07949 MTATP6P27-201ENST00000416987 621 ntBASIC2.48□□□□□ -2.01
RETP07949 HMGB1P49-201ENST00000418882 569 ntBASIC2.48□□□□□ -2.01
RETP07949 ATP5F1P1-201ENST00000433775 569 ntBASIC2.48□□□□□ -2.01
RETP07949 COX7BP2-201ENST00000437976 242 ntBASIC2.48□□□□□ -2.01
RETP07949 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC2.48□□□□□ -2.01
RETP07949 CACYBPP2-201ENST00000453625 678 ntBASIC2.48□□□□□ -2.01
RETP07949 MTCO3P11-201ENST00000455103 774 ntBASIC2.48□□□□□ -2.01
RETP07949 RPL18AP17-201ENST00000455326 198 ntBASIC2.48□□□□□ -2.01
RETP07949 SUMO2P2-201ENST00000456482 255 ntBASIC2.48□□□□□ -2.01
RETP07949 NAA50-206ENST00000493454 964 ntTSL 2 BASIC2.48□□□□□ -2.01
RETP07949 AC079395.1-201ENST00000510981 262 ntBASIC2.48□□□□□ -2.01
RETP07949 AC116353.3-201ENST00000511215 249 ntBASIC2.48□□□□□ -2.01
RETP07949 AC100870.1-201ENST00000522035 505 ntBASIC2.48□□□□□ -2.01
RETP07949 MTCO2P15-201ENST00000532655 656 ntBASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms