Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 SNORD121B-201ENST00000458838 81 ntBASIC4.16□□□□□ -1.74
HLA-DOAP06340 GMFBP1-201ENST00000467831 427 ntBASIC4.16□□□□□ -1.74
HLA-DOAP06340 RPL38P4-201ENST00000502376 214 ntBASIC4.16□□□□□ -1.74
HLA-DOAP06340 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC4.16□□□□□ -1.74
HLA-DOAP06340 TMEM248P1-201ENST00000510579 951 ntBASIC4.16□□□□□ -1.74
HLA-DOAP06340 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC4.16□□□□□ -1.74
HLA-DOAP06340 RNU2-27P-201ENST00000516185 142 ntBASIC4.16□□□□□ -1.74
HLA-DOAP06340 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.16□□□□□ -1.74
HLA-DOAP06340 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
HLA-DOAP06340 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.16□□□□□ -1.74
HLA-DOAP06340 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
HLA-DOAP06340 AL133271.1-201ENST00000538229 291 ntBASIC4.16□□□□□ -1.74
HLA-DOAP06340 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC4.16□□□□□ -1.74
HLA-DOAP06340 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC4.16□□□□□ -1.74
HLA-DOAP06340 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC4.16□□□□□ -1.74
HLA-DOAP06340 MTCO3P13-201ENST00000577757 781 ntBASIC4.16□□□□□ -1.74
HLA-DOAP06340 AC007687.1-201ENST00000602704 304 ntBASIC4.16□□□□□ -1.74
HLA-DOAP06340 MIR1302-2-201ENST00000607096 138 ntBASIC4.16□□□□□ -1.74
HLA-DOAP06340 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC4.16□□□□□ -1.74
HLA-DOAP06340 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC4.16□□□□□ -1.74
HLA-DOAP06340 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC4.16□□□□□ -1.74
HLA-DOAP06340 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
HLA-DOAP06340 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
HLA-DOAP06340 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
HLA-DOAP06340 AL138713.1-201ENST00000624026 2130 ntBASIC4.15□□□□□ -1.74
HLA-DOAP06340 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.74
HLA-DOAP06340 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
HLA-DOAP06340 RNU4-48P-201ENST00000365559 182 ntBASIC4.15□□□□□ -1.75
HLA-DOAP06340 SNORD51-201ENST00000384320 80 ntBASIC4.15□□□□□ -1.75
HLA-DOAP06340 RNU6-692P-201ENST00000384496 107 ntBASIC4.15□□□□□ -1.75
HLA-DOAP06340 RPS12P5-201ENST00000423449 371 ntBASIC4.15□□□□□ -1.75
HLA-DOAP06340 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC4.15□□□□□ -1.75
HLA-DOAP06340 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC4.15□□□□□ -1.75
HLA-DOAP06340 RPL7L1P10-201ENST00000427790 463 ntBASIC4.15□□□□□ -1.75
HLA-DOAP06340 LAMTOR3P1-201ENST00000428620 370 ntBASIC4.15□□□□□ -1.75
HLA-DOAP06340 Y_RNA.632-201ENST00000459189 102 ntBASIC4.15□□□□□ -1.75
HLA-DOAP06340 AC106872.2-201ENST00000494303 480 ntBASIC4.15□□□□□ -1.75
HLA-DOAP06340 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC4.15□□□□□ -1.75
HLA-DOAP06340 RN7SKP83-201ENST00000516512 178 ntBASIC4.15□□□□□ -1.75
HLA-DOAP06340 RN7SKP116-201ENST00000516902 319 ntBASIC4.15□□□□□ -1.75
HLA-DOAP06340 HMGB1P41-201ENST00000520234 440 ntBASIC4.15□□□□□ -1.75
HLA-DOAP06340 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC4.15□□□□□ -1.75
HLA-DOAP06340 AP005435.4-201ENST00000529514 284 ntBASIC4.15□□□□□ -1.75
HLA-DOAP06340 AC087241.2-201ENST00000535801 324 ntBASIC4.15□□□□□ -1.75
HLA-DOAP06340 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC4.15□□□□□ -1.75
HLA-DOAP06340 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC4.15□□□□□ -1.75
HLA-DOAP06340 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC4.15□□□□□ -1.75
HLA-DOAP06340 RNU6-89P-201ENST00000606519 100 ntBASIC4.15□□□□□ -1.75
HLA-DOAP06340 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.15□□□□□ -1.75
HLA-DOAP06340 uc_338.5-201ENST00000611839 155 ntBASIC4.15□□□□□ -1.75
HLA-DOAP06340 MIR8058-201ENST00000615737 89 ntBASIC4.15□□□□□ -1.75
HLA-DOAP06340 AC002550.2-201ENST00000621246 394 ntBASIC4.15□□□□□ -1.75
HLA-DOAP06340 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
HLA-DOAP06340 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
HLA-DOAP06340 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
HLA-DOAP06340 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC4.15□□□□□ -1.75
HLA-DOAP06340 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.15□□□□□ -1.75
HLA-DOAP06340 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC4.14□□□□□ -1.75
HLA-DOAP06340 SAGE4P-201ENST00000442271 3381 ntBASIC4.14□□□□□ -1.75
HLA-DOAP06340 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
HLA-DOAP06340 MFSD8-233ENST00000641482 4860 ntBASIC4.14□□□□□ -1.75
HLA-DOAP06340 MIR558-201ENST00000384920 94 ntBASIC4.14□□□□□ -1.75
HLA-DOAP06340 SNORD37.1-201ENST00000390968 65 ntBASIC4.14□□□□□ -1.75
HLA-DOAP06340 AL590004.1-201ENST00000405321 300 ntBASIC4.14□□□□□ -1.75
HLA-DOAP06340 TXNP7-201ENST00000406296 293 ntBASIC4.14□□□□□ -1.75
HLA-DOAP06340 AL160275.2-201ENST00000412010 394 ntBASIC4.14□□□□□ -1.75
HLA-DOAP06340 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC4.14□□□□□ -1.75
HLA-DOAP06340 UBE2Q2P12-201ENST00000414573 204 ntBASIC4.14□□□□□ -1.75
HLA-DOAP06340 AC137499.1-201ENST00000427602 88 ntBASIC4.14□□□□□ -1.75
HLA-DOAP06340 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC4.14□□□□□ -1.75
HLA-DOAP06340 HMGB3P11-201ENST00000440127 604 ntBASIC4.14□□□□□ -1.75
HLA-DOAP06340 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC4.14□□□□□ -1.75
HLA-DOAP06340 AL590639.1-201ENST00000456484 337 ntBASIC4.14□□□□□ -1.75
HLA-DOAP06340 snoU13.24-201ENST00000458998 104 ntBASIC4.14□□□□□ -1.75
HLA-DOAP06340 RNU6-329P-201ENST00000459618 107 ntBASIC4.14□□□□□ -1.75
HLA-DOAP06340 MRPS17P3-201ENST00000465453 385 ntBASIC4.14□□□□□ -1.75
HLA-DOAP06340 HMGB1P25-201ENST00000468402 607 ntBASIC4.14□□□□□ -1.75
HLA-DOAP06340 RN7SL594P-201ENST00000470590 287 ntBASIC4.14□□□□□ -1.75
HLA-DOAP06340 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC4.14□□□□□ -1.75
HLA-DOAP06340 Y_RNA.665-201ENST00000516177 98 ntBASIC4.14□□□□□ -1.75
HLA-DOAP06340 RNU6-1038P-201ENST00000516516 104 ntBASIC4.14□□□□□ -1.75
HLA-DOAP06340 RN7SKP219-201ENST00000516825 296 ntBASIC4.14□□□□□ -1.75
HLA-DOAP06340 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.14□□□□□ -1.75
HLA-DOAP06340 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC4.14□□□□□ -1.75
HLA-DOAP06340 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC4.14□□□□□ -1.75
HLA-DOAP06340 AL161713.1-201ENST00000555538 145 ntBASIC4.14□□□□□ -1.75
HLA-DOAP06340 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC4.14□□□□□ -1.75
HLA-DOAP06340 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC4.14□□□□□ -1.75
HLA-DOAP06340 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC4.14□□□□□ -1.75
HLA-DOAP06340 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4.14□□□□□ -1.75
HLA-DOAP06340 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC4.14□□□□□ -1.75
HLA-DOAP06340 Y_RNA.812-201ENST00000610788 101 ntBASIC4.14□□□□□ -1.75
HLA-DOAP06340 Y_RNA.784-201ENST00000613803 101 ntBASIC4.14□□□□□ -1.75
HLA-DOAP06340 AC093913.1-201ENST00000614178 329 ntBASIC4.14□□□□□ -1.75
HLA-DOAP06340 Y_RNA.787-201ENST00000616522 101 ntBASIC4.14□□□□□ -1.75
HLA-DOAP06340 Y_RNA.780-201ENST00000617336 101 ntBASIC4.14□□□□□ -1.75
HLA-DOAP06340 Y_RNA.801-201ENST00000619005 101 ntBASIC4.14□□□□□ -1.75
HLA-DOAP06340 AC091953.5-201ENST00000622919 233 ntBASIC4.14□□□□□ -1.75
HLA-DOAP06340 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.14□□□□□ -1.75
HLA-DOAP06340 PCNP-208ENST00000627393 136 ntTSL 2 BASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms