Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.8□□□□□ -1.96
MT-ND1P03886 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC2.8□□□□□ -1.96
MT-ND1P03886 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.8□□□□□ -1.96
MT-ND1P03886 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
MT-ND1P03886 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
MT-ND1P03886 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
MT-ND1P03886 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
MT-ND1P03886 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.79□□□□□ -1.96
MT-ND1P03886 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
MT-ND1P03886 TEX21P-201ENST00000447107 1476 ntBASIC2.79□□□□□ -1.96
MT-ND1P03886 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
MT-ND1P03886 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.79□□□□□ -1.96
MT-ND1P03886 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
MT-ND1P03886 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
MT-ND1P03886 RNY4P24-201ENST00000362735 96 ntBASIC2.79□□□□□ -1.96
MT-ND1P03886 RNU5E-8P-201ENST00000363502 116 ntBASIC2.79□□□□□ -1.96
MT-ND1P03886 RNU4-75P-201ENST00000364621 146 ntBASIC2.79□□□□□ -1.96
MT-ND1P03886 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
MT-ND1P03886 RNU6-348P-201ENST00000384386 107 ntBASIC2.79□□□□□ -1.96
MT-ND1P03886 RNU6-1035P-201ENST00000384477 107 ntBASIC2.79□□□□□ -1.96
MT-ND1P03886 DEFB108C-201ENST00000400154 252 ntBASIC2.79□□□□□ -1.96
MT-ND1P03886 MIR887-201ENST00000401258 79 ntBASIC2.79□□□□□ -1.96
MT-ND1P03886 AL590004.2-201ENST00000404787 371 ntBASIC2.79□□□□□ -1.96
MT-ND1P03886 Y_RNA.598-201ENST00000410480 95 ntBASIC2.79□□□□□ -1.96
MT-ND1P03886 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC2.79□□□□□ -1.96
MT-ND1P03886 AL353777.1-201ENST00000425552 326 ntBASIC2.79□□□□□ -1.96
MT-ND1P03886 AC008850.1-201ENST00000427546 362 ntBASIC2.79□□□□□ -1.96
MT-ND1P03886 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC2.79□□□□□ -1.96
MT-ND1P03886 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.79□□□□□ -1.96
MT-ND1P03886 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.79□□□□□ -1.96
MT-ND1P03886 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC2.79□□□□□ -1.96
MT-ND1P03886 AC091153.1-201ENST00000466297 402 ntBASIC2.79□□□□□ -1.96
MT-ND1P03886 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.79□□□□□ -1.96
MT-ND1P03886 MTND4P2-201ENST00000507767 1203 ntBASIC2.79□□□□□ -1.96
MT-ND1P03886 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC2.79□□□□□ -1.96
MT-ND1P03886 RAC1P5-201ENST00000512182 576 ntBASIC2.79□□□□□ -1.96
MT-ND1P03886 RNU6-1256P-201ENST00000516539 103 ntBASIC2.79□□□□□ -1.96
MT-ND1P03886 AC022616.6-201ENST00000520479 119 ntBASIC2.79□□□□□ -1.96
MT-ND1P03886 AC107934.1-201ENST00000522215 217 ntBASIC2.79□□□□□ -1.96
MT-ND1P03886 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.79□□□□□ -1.96
MT-ND1P03886 AP002963.1-201ENST00000530590 184 ntBASIC2.79□□□□□ -1.96
MT-ND1P03886 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
MT-ND1P03886 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.79□□□□□ -1.96
MT-ND1P03886 SETP2-201ENST00000553886 926 ntBASIC2.79□□□□□ -1.96
MT-ND1P03886 AL157394.1-201ENST00000562983 1224 ntBASIC2.79□□□□□ -1.96
MT-ND1P03886 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.79□□□□□ -1.96
MT-ND1P03886 MIR3118-1-201ENST00000581787 76 ntBASIC2.79□□□□□ -1.96
MT-ND1P03886 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC2.79□□□□□ -1.96
MT-ND1P03886 UBL5P2-201ENST00000583788 219 ntBASIC2.79□□□□□ -1.96
MT-ND1P03886 AC005771.1-201ENST00000585581 349 ntBASIC2.79□□□□□ -1.96
MT-ND1P03886 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.79□□□□□ -1.96
MT-ND1P03886 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.79□□□□□ -1.96
MT-ND1P03886 RPL23AP78-201ENST00000599928 470 ntBASIC2.79□□□□□ -1.96
MT-ND1P03886 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.79□□□□□ -1.96
MT-ND1P03886 AC004852.3-201ENST00000614131 326 ntBASIC2.79□□□□□ -1.96
MT-ND1P03886 AC018692.3-201ENST00000623929 123 ntBASIC2.79□□□□□ -1.96
MT-ND1P03886 AC090617.7-201ENST00000623952 126 ntBASIC2.79□□□□□ -1.96
MT-ND1P03886 AL138713.1-201ENST00000624026 2130 ntBASIC2.79□□□□□ -1.96
MT-ND1P03886 AC068880.5-201ENST00000624331 290 ntBASIC2.79□□□□□ -1.96
MT-ND1P03886 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC2.79□□□□□ -1.96
MT-ND1P03886 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC2.79□□□□□ -1.96
MT-ND1P03886 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.79□□□□□ -1.96
MT-ND1P03886 AL049641.1-201ENST00000441055 1948 ntBASIC2.79□□□□□ -1.96
MT-ND1P03886 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
MT-ND1P03886 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
MT-ND1P03886 AC008669.1-201ENST00000565823 2178 ntBASIC2.78□□□□□ -1.96
MT-ND1P03886 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
MT-ND1P03886 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
MT-ND1P03886 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
MT-ND1P03886 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.78□□□□□ -1.96
MT-ND1P03886 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC2.78□□□□□ -1.96
MT-ND1P03886 RNU6-637P-201ENST00000384050 107 ntBASIC2.78□□□□□ -1.96
MT-ND1P03886 U3.19-201ENST00000390893 196 ntBASIC2.78□□□□□ -1.96
MT-ND1P03886 SNORA40.3-201ENST00000390964 122 ntBASIC2.78□□□□□ -1.96
MT-ND1P03886 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
MT-ND1P03886 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
MT-ND1P03886 RNU6-248P-201ENST00000410720 107 ntBASIC2.78□□□□□ -1.96
MT-ND1P03886 HMGN1P14-201ENST00000412459 517 ntBASIC2.78□□□□□ -1.96
MT-ND1P03886 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC2.78□□□□□ -1.96
MT-ND1P03886 MORF4L1P6-201ENST00000418771 268 ntBASIC2.78□□□□□ -1.96
MT-ND1P03886 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC2.78□□□□□ -1.96
MT-ND1P03886 SAR1AP4-201ENST00000429225 591 ntBASIC2.78□□□□□ -1.96
MT-ND1P03886 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC2.78□□□□□ -1.96
MT-ND1P03886 ARPC3P1-201ENST00000437218 533 ntBASIC2.78□□□□□ -1.96
MT-ND1P03886 RPL22P17-201ENST00000438729 315 ntBASIC2.78□□□□□ -1.96
MT-ND1P03886 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.78□□□□□ -1.96
MT-ND1P03886 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC2.78□□□□□ -1.96
MT-ND1P03886 RGS5-217ENST00000451759 835 ntTSL 3 BASIC2.78□□□□□ -1.96
MT-ND1P03886 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC2.78□□□□□ -1.96
MT-ND1P03886 TPTE2P5-203ENST00000458118 728 ntBASIC2.78□□□□□ -1.96
MT-ND1P03886 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC2.78□□□□□ -1.96
MT-ND1P03886 SNORD42A-201ENST00000459584 64 ntBASIC2.78□□□□□ -1.96
MT-ND1P03886 RPS29P2-201ENST00000479278 136 ntBASIC2.78□□□□□ -1.96
MT-ND1P03886 AC135721.1-201ENST00000497954 479 ntBASIC2.78□□□□□ -1.96
MT-ND1P03886 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC2.78□□□□□ -1.96
MT-ND1P03886 MTCO3P7-201ENST00000510008 774 ntBASIC2.78□□□□□ -1.96
MT-ND1P03886 TTC39CP1-201ENST00000512513 755 ntBASIC2.78□□□□□ -1.96
MT-ND1P03886 RNU6-928P-201ENST00000516876 104 ntBASIC2.78□□□□□ -1.96
MT-ND1P03886 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.78□□□□□ -1.96
MT-ND1P03886 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 128.6 ms