Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 AL031667.3-201ENST00000620124 655 ntBASIC2□□□□□ -2.09
HLA-DQA1P01909 AC097655.1-201ENST00000635075 318 ntBASIC2□□□□□ -2.09
HLA-DQA1P01909 FO624990.1-201ENST00000636373 85 ntBASIC2□□□□□ -2.09
HLA-DQA1P01909 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC2□□□□□ -2.09
HLA-DQA1P01909 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
HLA-DQA1P01909 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2□□□□□ -2.09
HLA-DQA1P01909 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
HLA-DQA1P01909 AC096644.4-201ENST00000563417 2912 ntBASIC2□□□□□ -2.09
HLA-DQA1P01909 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2□□□□□ -2.09
HLA-DQA1P01909 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC1.99□□□□□ -2.09
HLA-DQA1P01909 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
HLA-DQA1P01909 RNU6-1180P-201ENST00000364935 107 ntBASIC1.99□□□□□ -2.09
HLA-DQA1P01909 RNU6-851P-201ENST00000384565 107 ntBASIC1.99□□□□□ -2.09
HLA-DQA1P01909 AL139397.2-201ENST00000404529 772 ntBASIC1.99□□□□□ -2.09
HLA-DQA1P01909 RNU2-33P-201ENST00000410344 192 ntBASIC1.99□□□□□ -2.09
HLA-DQA1P01909 AF274854.1-201ENST00000413236 615 ntBASIC1.99□□□□□ -2.09
HLA-DQA1P01909 RPLP0P7-201ENST00000416050 667 ntBASIC1.99□□□□□ -2.09
HLA-DQA1P01909 VPS26BP1-201ENST00000417155 755 ntBASIC1.99□□□□□ -2.09
HLA-DQA1P01909 BTF3L4P3-201ENST00000418879 476 ntBASIC1.99□□□□□ -2.09
HLA-DQA1P01909 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC1.99□□□□□ -2.09
HLA-DQA1P01909 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC1.99□□□□□ -2.09
HLA-DQA1P01909 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC1.99□□□□□ -2.09
HLA-DQA1P01909 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC1.99□□□□□ -2.09
HLA-DQA1P01909 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC1.99□□□□□ -2.09
HLA-DQA1P01909 RPS3AP12-201ENST00000443616 753 ntBASIC1.99□□□□□ -2.09
HLA-DQA1P01909 MTND4LP3-201ENST00000468320 276 ntBASIC1.99□□□□□ -2.09
HLA-DQA1P01909 RPS20P22-201ENST00000473700 357 ntBASIC1.99□□□□□ -2.09
HLA-DQA1P01909 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC1.99□□□□□ -2.09
HLA-DQA1P01909 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
HLA-DQA1P01909 SUMO2P6-201ENST00000505273 288 ntBASIC1.99□□□□□ -2.09
HLA-DQA1P01909 AC026427.2-201ENST00000506228 536 ntBASIC1.99□□□□□ -2.09
HLA-DQA1P01909 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC1.99□□□□□ -2.09
HLA-DQA1P01909 SCGB1D5P-201ENST00000515134 247 ntBASIC1.99□□□□□ -2.09
HLA-DQA1P01909 AC110760.3-202ENST00000515177 371 ntBASIC1.99□□□□□ -2.09
HLA-DQA1P01909 VTRNA2-2P-201ENST00000516091 103 ntBASIC1.99□□□□□ -2.09
HLA-DQA1P01909 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC1.99□□□□□ -2.09
HLA-DQA1P01909 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC1.99□□□□□ -2.09
HLA-DQA1P01909 MGST1-215ENST00000540056 546 ntTSL 3 BASIC1.99□□□□□ -2.09
HLA-DQA1P01909 AC007115.1-201ENST00000546853 234 ntBASIC1.99□□□□□ -2.09
HLA-DQA1P01909 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC1.99□□□□□ -2.09
HLA-DQA1P01909 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC1.99□□□□□ -2.09
HLA-DQA1P01909 AC090888.2-201ENST00000559765 1144 ntBASIC1.99□□□□□ -2.09
HLA-DQA1P01909 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC1.99□□□□□ -2.09
HLA-DQA1P01909 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC1.99□□□□□ -2.09
HLA-DQA1P01909 MIR5195-201ENST00000583555 115 ntBASIC1.99□□□□□ -2.09
HLA-DQA1P01909 HMGN2P15-201ENST00000585707 270 ntBASIC1.99□□□□□ -2.09
HLA-DQA1P01909 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC1.99□□□□□ -2.09
HLA-DQA1P01909 DPPA3P3-201ENST00000603842 430 ntBASIC1.99□□□□□ -2.09
HLA-DQA1P01909 AL161729.4-201ENST00000604650 476 ntBASIC1.99□□□□□ -2.09
HLA-DQA1P01909 AC018714.1-201ENST00000605028 208 ntBASIC1.99□□□□□ -2.09
HLA-DQA1P01909 AC107214.2-201ENST00000608204 634 ntBASIC1.99□□□□□ -2.09
HLA-DQA1P01909 FTX_3.1-201ENST00000610451 147 ntBASIC1.99□□□□□ -2.09
HLA-DQA1P01909 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC1.99□□□□□ -2.09
HLA-DQA1P01909 AC021755.4-201ENST00000616620 456 ntBASIC1.99□□□□□ -2.09
HLA-DQA1P01909 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC1.99□□□□□ -2.09
HLA-DQA1P01909 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
HLA-DQA1P01909 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
HLA-DQA1P01909 ZNF833P-201ENST00000424938 1494 ntBASIC1.99□□□□□ -2.09
HLA-DQA1P01909 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
HLA-DQA1P01909 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
HLA-DQA1P01909 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC1.99□□□□□ -2.09
HLA-DQA1P01909 IL33-203ENST00000456383 2501 ntTSL 5 BASIC1.98□□□□□ -2.09
HLA-DQA1P01909 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
HLA-DQA1P01909 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC1.98□□□□□ -2.09
HLA-DQA1P01909 NF1-214ENST00000490416 1329 ntTSL 3 BASIC1.98□□□□□ -2.09
HLA-DQA1P01909 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
HLA-DQA1P01909 GNG5P1-201ENST00000255500 204 ntBASIC1.98□□□□□ -2.09
HLA-DQA1P01909 RNA5SP387-201ENST00000364226 106 ntBASIC1.98□□□□□ -2.09
HLA-DQA1P01909 RNA5SP139-201ENST00000364340 117 ntBASIC1.98□□□□□ -2.09
HLA-DQA1P01909 RNU6-660P-201ENST00000364566 109 ntBASIC1.98□□□□□ -2.09
HLA-DQA1P01909 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC1.98□□□□□ -2.09
HLA-DQA1P01909 RNU6-253P-201ENST00000384730 105 ntBASIC1.98□□□□□ -2.09
HLA-DQA1P01909 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC1.98□□□□□ -2.09
HLA-DQA1P01909 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC1.98□□□□□ -2.09
HLA-DQA1P01909 UBE2Q2P12-201ENST00000414573 204 ntBASIC1.98□□□□□ -2.09
HLA-DQA1P01909 USP9YP27-201ENST00000418455 438 ntBASIC1.98□□□□□ -2.09
HLA-DQA1P01909 USP9YP26-201ENST00000421008 661 ntBASIC1.98□□□□□ -2.09
HLA-DQA1P01909 ZNF863P-201ENST00000426746 417 ntBASIC1.98□□□□□ -2.09
HLA-DQA1P01909 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC1.98□□□□□ -2.09
HLA-DQA1P01909 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC1.98□□□□□ -2.09
HLA-DQA1P01909 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC1.98□□□□□ -2.09
HLA-DQA1P01909 USP12PX-201ENST00000432383 1057 ntBASIC1.98□□□□□ -2.09
HLA-DQA1P01909 AC010153.1-201ENST00000432862 727 ntBASIC1.98□□□□□ -2.09
HLA-DQA1P01909 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC1.98□□□□□ -2.09
HLA-DQA1P01909 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC1.98□□□□□ -2.09
HLA-DQA1P01909 AL354941.1-201ENST00000438600 464 ntBASIC1.98□□□□□ -2.09
HLA-DQA1P01909 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC1.98□□□□□ -2.09
HLA-DQA1P01909 AC020550.1-201ENST00000447385 163 ntBASIC1.98□□□□□ -2.09
HLA-DQA1P01909 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
HLA-DQA1P01909 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC1.98□□□□□ -2.09
HLA-DQA1P01909 RNU7-59P-201ENST00000459101 61 ntBASIC1.98□□□□□ -2.09
HLA-DQA1P01909 RNU7-23P-201ENST00000459465 62 ntBASIC1.98□□□□□ -2.09
HLA-DQA1P01909 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
HLA-DQA1P01909 OR5BM1P-201ENST00000512021 366 ntBASIC1.98□□□□□ -2.09
HLA-DQA1P01909 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC1.98□□□□□ -2.09
HLA-DQA1P01909 AC091826.1-201ENST00000514065 313 ntBASIC1.98□□□□□ -2.09
HLA-DQA1P01909 RN7SKP265-201ENST00000516448 223 ntBASIC1.98□□□□□ -2.09
HLA-DQA1P01909 RNU6-64P-201ENST00000517119 105 ntBASIC1.98□□□□□ -2.09
HLA-DQA1P01909 AP000907.2-201ENST00000530827 353 ntBASIC1.98□□□□□ -2.09
HLA-DQA1P01909 AC068587.4-201ENST00000533893 186 ntBASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms