Protein–RNA interactions for Protein: O96006

ZBED1, Zinc finger BED domain-containing protein 1, humanhuman

Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZBED1O96006 USP9YP27-201ENST00000418455 438 ntBASIC3.94□□□□□ -1.78
ZBED1O96006 AL109913.1-201ENST00000421173 514 ntBASIC3.94□□□□□ -1.78
ZBED1O96006 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC3.94□□□□□ -1.78
ZBED1O96006 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC3.94□□□□□ -1.78
ZBED1O96006 CALM2P2-201ENST00000428512 440 ntBASIC3.94□□□□□ -1.78
ZBED1O96006 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC3.94□□□□□ -1.78
ZBED1O96006 MTND1P18-201ENST00000448191 573 ntBASIC3.94□□□□□ -1.78
ZBED1O96006 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.94□□□□□ -1.78
ZBED1O96006 CEACAMP4-201ENST00000457676 421 ntBASIC3.94□□□□□ -1.78
ZBED1O96006 KC877373.1-201ENST00000479066 408 ntBASIC3.94□□□□□ -1.78
ZBED1O96006 NDUFB4P9-201ENST00000511646 388 ntBASIC3.94□□□□□ -1.78
ZBED1O96006 AC011352.1-201ENST00000512300 793 ntBASIC3.94□□□□□ -1.78
ZBED1O96006 AC105417.1-201ENST00000514691 285 ntBASIC3.94□□□□□ -1.78
ZBED1O96006 Y_RNA.704-201ENST00000516851 102 ntBASIC3.94□□□□□ -1.78
ZBED1O96006 RNA5SP290-201ENST00000517133 127 ntBASIC3.94□□□□□ -1.78
ZBED1O96006 AC023632.4-201ENST00000517783 191 ntBASIC3.94□□□□□ -1.78
ZBED1O96006 AC022690.1-201ENST00000526681 550 ntBASIC3.94□□□□□ -1.78
ZBED1O96006 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.94□□□□□ -1.78
ZBED1O96006 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC3.94□□□□□ -1.78
ZBED1O96006 TRAV28-201ENST00000557548 323 ntBASIC3.94□□□□□ -1.78
ZBED1O96006 AC093788.1-201ENST00000609356 927 ntBASIC3.94□□□□□ -1.78
ZBED1O96006 AC012409.4-201ENST00000612923 249 ntBASIC3.94□□□□□ -1.78
ZBED1O96006 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
ZBED1O96006 AC130324.3-201ENST00000614165 542 ntBASIC3.94□□□□□ -1.78
ZBED1O96006 AL121772.2-201ENST00000614331 297 ntBASIC3.94□□□□□ -1.78
ZBED1O96006 AL354950.2-201ENST00000617939 290 ntBASIC3.94□□□□□ -1.78
ZBED1O96006 uc_338.11-201ENST00000619132 160 ntBASIC3.94□□□□□ -1.78
ZBED1O96006 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC3.94□□□□□ -1.78
ZBED1O96006 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
ZBED1O96006 TPTE2P4-201ENST00000258589 1605 ntBASIC3.94□□□□□ -1.78
ZBED1O96006 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
ZBED1O96006 ANKRD36BP1-202ENST00000604892 1417 ntBASIC3.94□□□□□ -1.78
ZBED1O96006 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
ZBED1O96006 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
ZBED1O96006 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
ZBED1O96006 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.93□□□□□ -1.78
ZBED1O96006 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
ZBED1O96006 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.93□□□□□ -1.78
ZBED1O96006 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.93□□□□□ -1.78
ZBED1O96006 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.93□□□□□ -1.78
ZBED1O96006 RNU6-1287P-201ENST00000362914 107 ntBASIC3.93□□□□□ -1.78
ZBED1O96006 Y_RNA.245-201ENST00000364493 95 ntBASIC3.93□□□□□ -1.78
ZBED1O96006 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
ZBED1O96006 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
ZBED1O96006 Y_RNA.450-201ENST00000384198 113 ntBASIC3.93□□□□□ -1.78
ZBED1O96006 RNU6-1060P-201ENST00000384664 107 ntBASIC3.93□□□□□ -1.78
ZBED1O96006 Y_RNA.573-201ENST00000384763 105 ntBASIC3.93□□□□□ -1.78
ZBED1O96006 MIR325-201ENST00000385260 98 ntBASIC3.93□□□□□ -1.78
ZBED1O96006 RNA5SP424-201ENST00000390988 115 ntBASIC3.93□□□□□ -1.78
ZBED1O96006 SNORD115-47-201ENST00000391226 86 ntBASIC3.93□□□□□ -1.78
ZBED1O96006 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.93□□□□□ -1.78
ZBED1O96006 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
ZBED1O96006 RPS12P24-201ENST00000412619 387 ntBASIC3.93□□□□□ -1.78
ZBED1O96006 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
ZBED1O96006 AC080125.1-201ENST00000414888 684 ntBASIC3.93□□□□□ -1.78
ZBED1O96006 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.93□□□□□ -1.78
ZBED1O96006 AL512844.2-201ENST00000433990 593 ntBASIC3.93□□□□□ -1.78
ZBED1O96006 SNRPEP4-201ENST00000435815 279 ntBASIC3.93□□□□□ -1.78
ZBED1O96006 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.93□□□□□ -1.78
ZBED1O96006 Z82210.1-201ENST00000440037 231 ntBASIC3.93□□□□□ -1.78
ZBED1O96006 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.93□□□□□ -1.78
ZBED1O96006 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.93□□□□□ -1.78
ZBED1O96006 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC3.93□□□□□ -1.78
ZBED1O96006 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.93□□□□□ -1.78
ZBED1O96006 RNU6-261P-201ENST00000459506 102 ntBASIC3.93□□□□□ -1.78
ZBED1O96006 RN7SL93P-201ENST00000463035 293 ntBASIC3.93□□□□□ -1.78
ZBED1O96006 AC083798.1-201ENST00000472671 131 ntBASIC3.93□□□□□ -1.78
ZBED1O96006 AC084357.1-201ENST00000473404 255 ntBASIC3.93□□□□□ -1.78
ZBED1O96006 RPL36AP51-201ENST00000487216 318 ntBASIC3.93□□□□□ -1.78
ZBED1O96006 RPL39P36-201ENST00000490784 156 ntBASIC3.93□□□□□ -1.78
ZBED1O96006 UBE2CP3-201ENST00000502715 450 ntBASIC3.93□□□□□ -1.78
ZBED1O96006 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.93□□□□□ -1.78
ZBED1O96006 AC104806.1-201ENST00000508720 308 ntBASIC3.93□□□□□ -1.78
ZBED1O96006 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC3.93□□□□□ -1.78
ZBED1O96006 RNU6-123P-201ENST00000516163 102 ntBASIC3.93□□□□□ -1.78
ZBED1O96006 RNU6-1281P-201ENST00000516223 105 ntBASIC3.93□□□□□ -1.78
ZBED1O96006 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC3.93□□□□□ -1.78
ZBED1O96006 AC109635.3-201ENST00000529536 185 ntBASIC3.93□□□□□ -1.78
ZBED1O96006 MIR4775-201ENST00000581168 75 ntBASIC3.93□□□□□ -1.78
ZBED1O96006 BNIP3P9-201ENST00000603714 553 ntBASIC3.93□□□□□ -1.78
ZBED1O96006 RNU1-30P-201ENST00000606575 163 ntBASIC3.93□□□□□ -1.78
ZBED1O96006 AC022893.3-201ENST00000607665 437 ntBASIC3.93□□□□□ -1.78
ZBED1O96006 AC009570.1-201ENST00000609599 745 ntBASIC3.93□□□□□ -1.78
ZBED1O96006 AC002076.2-201ENST00000617362 122 ntBASIC3.93□□□□□ -1.78
ZBED1O96006 AC034229.5-201ENST00000624258 185 ntBASIC3.93□□□□□ -1.78
ZBED1O96006 MTND1P37-201ENST00000636562 264 ntBASIC3.93□□□□□ -1.78
ZBED1O96006 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.93□□□□□ -1.78
ZBED1O96006 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
ZBED1O96006 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
ZBED1O96006 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.93□□□□□ -1.78
ZBED1O96006 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
ZBED1O96006 AC066616.2-201ENST00000559334 1481 ntBASIC3.92□□□□□ -1.78
ZBED1O96006 AC002546.1-201ENST00000588041 2504 ntBASIC3.92□□□□□ -1.78
ZBED1O96006 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
ZBED1O96006 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
ZBED1O96006 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
ZBED1O96006 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.92□□□□□ -1.78
ZBED1O96006 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
ZBED1O96006 RNU6-996P-201ENST00000365438 107 ntBASIC3.92□□□□□ -1.78
ZBED1O96006 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms