Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC5.57□□□□□ -1.52
PTCD1O75127 HSP90AA5P-201ENST00000438353 2192 ntBASIC5.57□□□□□ -1.52
PTCD1O75127 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC5.57□□□□□ -1.52
PTCD1O75127 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
PTCD1O75127 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
PTCD1O75127 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC5.57□□□□□ -1.52
PTCD1O75127 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.56□□□□□ -1.52
PTCD1O75127 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
PTCD1O75127 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
PTCD1O75127 AC074029.4-201ENST00000624796 1859 ntBASIC5.56□□□□□ -1.52
PTCD1O75127 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PTCD1O75127 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.56□□□□□ -1.52
PTCD1O75127 RNA5SP513-201ENST00000364648 118 ntBASIC5.56□□□□□ -1.52
PTCD1O75127 RNU6-99P-201ENST00000364721 107 ntBASIC5.56□□□□□ -1.52
PTCD1O75127 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PTCD1O75127 Y_RNA.404-201ENST00000383978 102 ntBASIC5.56□□□□□ -1.52
PTCD1O75127 RPL21P65-201ENST00000406094 466 ntBASIC5.56□□□□□ -1.52
PTCD1O75127 Y_RNA.594-201ENST00000410373 140 ntBASIC5.56□□□□□ -1.52
PTCD1O75127 PPP1R11P2-201ENST00000423543 382 ntBASIC5.56□□□□□ -1.52
PTCD1O75127 AC093151.1-201ENST00000427711 313 ntBASIC5.56□□□□□ -1.52
PTCD1O75127 RPL21P91-201ENST00000429231 479 ntBASIC5.56□□□□□ -1.52
PTCD1O75127 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC5.56□□□□□ -1.52
PTCD1O75127 RPL29P29-201ENST00000448725 423 ntBASIC5.56□□□□□ -1.52
PTCD1O75127 GSTA11P-201ENST00000452866 669 ntBASIC5.56□□□□□ -1.52
PTCD1O75127 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC5.56□□□□□ -1.52
PTCD1O75127 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC5.56□□□□□ -1.52
PTCD1O75127 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC5.56□□□□□ -1.52
PTCD1O75127 CYCSP27-201ENST00000527643 293 ntBASIC5.56□□□□□ -1.52
PTCD1O75127 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC5.56□□□□□ -1.52
PTCD1O75127 AC025423.5-201ENST00000550230 219 ntBASIC5.56□□□□□ -1.52
PTCD1O75127 AC026371.1-201ENST00000551867 419 ntBASIC5.56□□□□□ -1.52
PTCD1O75127 AL161713.1-201ENST00000555538 145 ntBASIC5.56□□□□□ -1.52
PTCD1O75127 DLEU2_5.1-201ENST00000615567 84 ntBASIC5.56□□□□□ -1.52
PTCD1O75127 AC067931.1-201ENST00000624190 671 ntBASIC5.56□□□□□ -1.52
PTCD1O75127 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
PTCD1O75127 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
PTCD1O75127 AC008079.2-201ENST00000623543 20396 ntBASIC5.56□□□□□ -1.52
PTCD1O75127 AC005332.5-201ENST00000591222 2919 ntBASIC5.56□□□□□ -1.52
PTCD1O75127 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
PTCD1O75127 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PTCD1O75127 AC006971.1-201ENST00000407916 4486 ntBASIC5.56□□□□□ -1.52
PTCD1O75127 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC5.56□□□□□ -1.52
PTCD1O75127 AC104260.2-201ENST00000623551 3497 ntBASIC5.55□□□□□ -1.52
PTCD1O75127 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC5.55□□□□□ -1.52
PTCD1O75127 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
PTCD1O75127 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.55□□□□□ -1.52
PTCD1O75127 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
PTCD1O75127 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
PTCD1O75127 RNU6-306P-201ENST00000384617 107 ntBASIC5.55□□□□□ -1.52
PTCD1O75127 Y_RNA.556-201ENST00000384677 113 ntBASIC5.55□□□□□ -1.52
PTCD1O75127 MIR670-201ENST00000390142 98 ntBASIC5.55□□□□□ -1.52
PTCD1O75127 SNORA75.6-201ENST00000391318 127 ntBASIC5.55□□□□□ -1.52
PTCD1O75127 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC5.55□□□□□ -1.52
PTCD1O75127 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC5.55□□□□□ -1.52
PTCD1O75127 HIGD1AP11-201ENST00000438361 280 ntBASIC5.55□□□□□ -1.52
PTCD1O75127 RPS29P7-201ENST00000439662 171 ntBASIC5.55□□□□□ -1.52
PTCD1O75127 AL589765.3-201ENST00000446084 462 ntBASIC5.55□□□□□ -1.52
PTCD1O75127 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
PTCD1O75127 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
PTCD1O75127 SNRPCP3-201ENST00000474888 476 ntBASIC5.55□□□□□ -1.52
PTCD1O75127 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC5.55□□□□□ -1.52
PTCD1O75127 RN7SL604P-201ENST00000492589 296 ntBASIC5.55□□□□□ -1.52
PTCD1O75127 AC026801.1-201ENST00000497178 464 ntBASIC5.55□□□□□ -1.52
PTCD1O75127 AC099522.1-202ENST00000514718 367 ntBASIC5.55□□□□□ -1.52
PTCD1O75127 AC008489.1-201ENST00000524271 483 ntBASIC5.55□□□□□ -1.52
PTCD1O75127 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC5.55□□□□□ -1.52
PTCD1O75127 MIR4286-201ENST00000580651 93 ntBASIC5.55□□□□□ -1.52
PTCD1O75127 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC5.55□□□□□ -1.52
PTCD1O75127 AC100812.1-201ENST00000607622 580 ntBASIC5.55□□□□□ -1.52
PTCD1O75127 FAM27D1-201ENST00000612308 341 ntBASIC5.55□□□□□ -1.52
PTCD1O75127 AL355810.1-201ENST00000614629 552 ntBASIC5.55□□□□□ -1.52
PTCD1O75127 AC091905.2-201ENST00000623143 306 ntBASIC5.55□□□□□ -1.52
PTCD1O75127 THAP12P5-201ENST00000405864 2275 ntBASIC5.55□□□□□ -1.52
PTCD1O75127 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC5.55□□□□□ -1.52
PTCD1O75127 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
PTCD1O75127 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
PTCD1O75127 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
PTCD1O75127 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.54□□□□□ -1.52
PTCD1O75127 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.54□□□□□ -1.52
PTCD1O75127 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC5.54□□□□□ -1.52
PTCD1O75127 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC5.54□□□□□ -1.52
PTCD1O75127 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PTCD1O75127 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.54□□□□□ -1.52
PTCD1O75127 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
PTCD1O75127 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PTCD1O75127 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC5.54□□□□□ -1.52
PTCD1O75127 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
PTCD1O75127 Y_RNA.552-201ENST00000384665 112 ntBASIC5.54□□□□□ -1.52
PTCD1O75127 RNU6-95P-201ENST00000384697 107 ntBASIC5.54□□□□□ -1.52
PTCD1O75127 MIR554-201ENST00000384874 96 ntBASIC5.54□□□□□ -1.52
PTCD1O75127 RNU6-1109P-201ENST00000391187 107 ntBASIC5.54□□□□□ -1.52
PTCD1O75127 HSPE1P8-201ENST00000406997 288 ntBASIC5.54□□□□□ -1.52
PTCD1O75127 RNU4-6P-201ENST00000410804 122 ntBASIC5.54□□□□□ -1.52
PTCD1O75127 CYCSP19-201ENST00000411715 316 ntBASIC5.54□□□□□ -1.52
PTCD1O75127 AL160275.3-201ENST00000423876 471 ntBASIC5.54□□□□□ -1.52
PTCD1O75127 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC5.54□□□□□ -1.52
PTCD1O75127 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC5.54□□□□□ -1.52
PTCD1O75127 RNU6-953P-201ENST00000459154 107 ntBASIC5.54□□□□□ -1.52
PTCD1O75127 snoU13.3-201ENST00000459441 104 ntBASIC5.54□□□□□ -1.52
PTCD1O75127 RPL5P30-201ENST00000465511 891 ntBASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms