Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 RNU6-1261P-201ENST00000517194 104 ntBASIC2.16□□□□□ -2.06
SHOX2O60902 SNORA31.22-201ENST00000517204 135 ntBASIC2.16□□□□□ -2.06
SHOX2O60902 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC2.16□□□□□ -2.06
SHOX2O60902 AP002748.2-201ENST00000528671 348 ntBASIC2.16□□□□□ -2.06
SHOX2O60902 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.16□□□□□ -2.06
SHOX2O60902 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
SHOX2O60902 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC2.16□□□□□ -2.06
SHOX2O60902 AC027176.1-201ENST00000560204 514 ntBASIC2.16□□□□□ -2.06
SHOX2O60902 RPS3AP23-202ENST00000574601 686 ntBASIC2.16□□□□□ -2.06
SHOX2O60902 AC007621.1-201ENST00000604544 437 ntBASIC2.16□□□□□ -2.06
SHOX2O60902 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
SHOX2O60902 AL596245.1-201ENST00000618994 362 ntBASIC2.16□□□□□ -2.06
SHOX2O60902 AL157770.1-201ENST00000623049 439 ntBASIC2.16□□□□□ -2.06
SHOX2O60902 AC109454.4-201ENST00000623411 649 ntBASIC2.16□□□□□ -2.06
SHOX2O60902 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC2.16□□□□□ -2.06
SHOX2O60902 AC087821.2-201ENST00000637086 450 ntBASIC2.16□□□□□ -2.06
SHOX2O60902 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.16□□□□□ -2.06
SHOX2O60902 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.16□□□□□ -2.06
SHOX2O60902 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC2.15□□□□□ -2.06
SHOX2O60902 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC2.15□□□□□ -2.06
SHOX2O60902 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC2.15□□□□□ -2.07
SHOX2O60902 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
SHOX2O60902 SNORA67.4-201ENST00000384688 142 ntBASIC2.15□□□□□ -2.07
SHOX2O60902 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.15□□□□□ -2.07
SHOX2O60902 GTF2IP20-201ENST00000431663 360 ntBASIC2.15□□□□□ -2.07
SHOX2O60902 CBWD4P-201ENST00000445695 655 ntBASIC2.15□□□□□ -2.07
SHOX2O60902 COX6CP12-201ENST00000446748 202 ntBASIC2.15□□□□□ -2.07
SHOX2O60902 MTND2P24-201ENST00000453434 806 ntBASIC2.15□□□□□ -2.07
SHOX2O60902 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC2.15□□□□□ -2.07
SHOX2O60902 AL049874.1-201ENST00000489560 388 ntBASIC2.15□□□□□ -2.07
SHOX2O60902 AC090453.1-201ENST00000495560 436 ntBASIC2.15□□□□□ -2.07
SHOX2O60902 EIF4EP3-201ENST00000498782 656 ntBASIC2.15□□□□□ -2.07
SHOX2O60902 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.15□□□□□ -2.07
SHOX2O60902 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.15□□□□□ -2.07
SHOX2O60902 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC2.15□□□□□ -2.07
SHOX2O60902 AP003066.2-201ENST00000529375 555 ntBASIC2.15□□□□□ -2.07
SHOX2O60902 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC2.15□□□□□ -2.07
SHOX2O60902 AC021269.2-201ENST00000532318 330 ntBASIC2.15□□□□□ -2.07
SHOX2O60902 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.15□□□□□ -2.07
SHOX2O60902 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC2.15□□□□□ -2.07
SHOX2O60902 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.15□□□□□ -2.07
SHOX2O60902 MIR4637-201ENST00000582405 84 ntBASIC2.15□□□□□ -2.07
SHOX2O60902 MIR4658-201ENST00000584344 65 ntBASIC2.15□□□□□ -2.07
SHOX2O60902 AC098483.2-201ENST00000603158 454 ntBASIC2.15□□□□□ -2.07
SHOX2O60902 AC012493.3-201ENST00000604494 112 ntBASIC2.15□□□□□ -2.07
SHOX2O60902 AL161729.4-201ENST00000604650 476 ntBASIC2.15□□□□□ -2.07
SHOX2O60902 AC135507.1-201ENST00000607214 561 ntBASIC2.15□□□□□ -2.07
SHOX2O60902 AC004067.1-201ENST00000608733 700 ntBASIC2.15□□□□□ -2.07
SHOX2O60902 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
SHOX2O60902 AL159972.1-201ENST00000625150 448 ntBASIC2.15□□□□□ -2.07
SHOX2O60902 MKKS-204ENST00000639674 192 ntBASIC2.15□□□□□ -2.07
SHOX2O60902 CCT4P2-201ENST00000233836 1548 ntBASIC2.15□□□□□ -2.07
SHOX2O60902 CENPCP1-201ENST00000533085 2578 ntBASIC2.14□□□□□ -2.07
SHOX2O60902 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.14□□□□□ -2.07
SHOX2O60902 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
SHOX2O60902 RNU6-741P-201ENST00000383889 107 ntBASIC2.14□□□□□ -2.07
SHOX2O60902 SNORA36C-201ENST00000384289 132 ntBASIC2.14□□□□□ -2.07
SHOX2O60902 Y_RNA.540-201ENST00000384638 111 ntBASIC2.14□□□□□ -2.07
SHOX2O60902 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.14□□□□□ -2.07
SHOX2O60902 RPS7P9-201ENST00000414704 586 ntBASIC2.14□□□□□ -2.07
SHOX2O60902 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.14□□□□□ -2.07
SHOX2O60902 Z82210.1-201ENST00000440037 231 ntBASIC2.14□□□□□ -2.07
SHOX2O60902 AL049734.2-201ENST00000441066 616 ntBASIC2.14□□□□□ -2.07
SHOX2O60902 PIGFP3-201ENST00000441918 722 ntBASIC2.14□□□□□ -2.07
SHOX2O60902 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC2.14□□□□□ -2.07
SHOX2O60902 AC005297.2-201ENST00000450430 606 ntBASIC2.14□□□□□ -2.07
SHOX2O60902 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC2.14□□□□□ -2.07
SHOX2O60902 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC2.14□□□□□ -2.07
SHOX2O60902 NDUFB4P2-201ENST00000509515 391 ntBASIC2.14□□□□□ -2.07
SHOX2O60902 AC022634.1-201ENST00000520765 532 ntBASIC2.14□□□□□ -2.07
SHOX2O60902 HMGN1P28-201ENST00000521340 364 ntBASIC2.14□□□□□ -2.07
SHOX2O60902 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC2.14□□□□□ -2.07
SHOX2O60902 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
SHOX2O60902 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.14□□□□□ -2.07
SHOX2O60902 LRRC37A5P-203ENST00000580181 585 ntBASIC2.14□□□□□ -2.07
SHOX2O60902 AP001004.1-201ENST00000582468 324 ntBASIC2.14□□□□□ -2.07
SHOX2O60902 AC068313.1-201ENST00000604028 1008 ntBASIC2.14□□□□□ -2.07
SHOX2O60902 AP005229.2-201ENST00000609980 697 ntBASIC2.14□□□□□ -2.07
SHOX2O60902 AL118556.2-201ENST00000614375 824 ntBASIC2.14□□□□□ -2.07
SHOX2O60902 MIR6817-201ENST00000615588 66 ntBASIC2.14□□□□□ -2.07
SHOX2O60902 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.14□□□□□ -2.07
SHOX2O60902 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC2.14□□□□□ -2.07
SHOX2O60902 Z99496.1-201ENST00000469424 1477 ntBASIC2.14□□□□□ -2.07
SHOX2O60902 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.13□□□□□ -2.07
SHOX2O60902 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
SHOX2O60902 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
SHOX2O60902 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
SHOX2O60902 RNU6-207P-201ENST00000384137 107 ntBASIC2.13□□□□□ -2.07
SHOX2O60902 RNU1-52P-201ENST00000384190 164 ntBASIC2.13□□□□□ -2.07
SHOX2O60902 SNRPEP2-201ENST00000397592 279 ntBASIC2.13□□□□□ -2.07
SHOX2O60902 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.13□□□□□ -2.07
SHOX2O60902 RNA5SP489-201ENST00000410986 109 ntBASIC2.13□□□□□ -2.07
SHOX2O60902 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC2.13□□□□□ -2.07
SHOX2O60902 PPP1R11P2-201ENST00000423543 382 ntBASIC2.13□□□□□ -2.07
SHOX2O60902 NANOGP5-201ENST00000424456 877 ntBASIC2.13□□□□□ -2.07
SHOX2O60902 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.13□□□□□ -2.07
SHOX2O60902 AC092427.1-201ENST00000439177 601 ntBASIC2.13□□□□□ -2.07
SHOX2O60902 MTCO2P9-201ENST00000503214 694 ntBASIC2.13□□□□□ -2.07
SHOX2O60902 AC114786.4-201ENST00000508771 728 ntBASIC2.13□□□□□ -2.07
SHOX2O60902 AC114797.1-201ENST00000514003 728 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms