Protein–RNA interactions for Protein: O60563

CCNT1, Cyclin-T1, humanhuman

Known RBP Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1O60563 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CCNT1O60563 OR5D17P-201ENST00000531492 978 ntBASIC3.66□□□□□ -1.82
CCNT1O60563 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.66□□□□□ -1.82
CCNT1O60563 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC3.66□□□□□ -1.82
CCNT1O60563 AC124947.2-202ENST00000552735 133 ntBASIC3.66□□□□□ -1.82
CCNT1O60563 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.66□□□□□ -1.82
CCNT1O60563 MIR2682-201ENST00000580305 110 ntBASIC3.66□□□□□ -1.82
CCNT1O60563 AC007684.1-201ENST00000609671 477 ntBASIC3.66□□□□□ -1.82
CCNT1O60563 MIR7112-201ENST00000616126 65 ntBASIC3.66□□□□□ -1.82
CCNT1O60563 AC124864.2-201ENST00000624736 186 ntBASIC3.66□□□□□ -1.82
CCNT1O60563 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.66□□□□□ -1.82
CCNT1O60563 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
CCNT1O60563 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CCNT1O60563 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
CCNT1O60563 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CCNT1O60563 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.65□□□□□ -1.82
CCNT1O60563 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
CCNT1O60563 CR848007.1-201ENST00000442354 1699 ntBASIC3.65□□□□□ -1.82
CCNT1O60563 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
CCNT1O60563 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
CCNT1O60563 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.65□□□□□ -1.82
CCNT1O60563 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.65□□□□□ -1.82
CCNT1O60563 Y_RNA.6-201ENST00000362350 114 ntBASIC3.65□□□□□ -1.83
CCNT1O60563 Y_RNA.159-201ENST00000363674 87 ntBASIC3.65□□□□□ -1.83
CCNT1O60563 RNA5SP189-201ENST00000364920 115 ntBASIC3.65□□□□□ -1.83
CCNT1O60563 Y_RNA.372-201ENST00000365599 102 ntBASIC3.65□□□□□ -1.83
CCNT1O60563 RNU6-456P-201ENST00000384493 107 ntBASIC3.65□□□□□ -1.83
CCNT1O60563 MIR607-201ENST00000385241 96 ntBASIC3.65□□□□□ -1.83
CCNT1O60563 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC3.65□□□□□ -1.83
CCNT1O60563 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC3.65□□□□□ -1.83
CCNT1O60563 AC073464.1-201ENST00000429823 534 ntBASIC3.65□□□□□ -1.83
CCNT1O60563 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.65□□□□□ -1.83
CCNT1O60563 AC016696.1-201ENST00000446949 318 ntBASIC3.65□□□□□ -1.83
CCNT1O60563 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.65□□□□□ -1.83
CCNT1O60563 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC3.65□□□□□ -1.83
CCNT1O60563 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.65□□□□□ -1.83
CCNT1O60563 HMGN1P28-201ENST00000521340 364 ntBASIC3.65□□□□□ -1.83
CCNT1O60563 ERHP1-201ENST00000523006 310 ntBASIC3.65□□□□□ -1.83
CCNT1O60563 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC3.65□□□□□ -1.83
CCNT1O60563 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.65□□□□□ -1.83
CCNT1O60563 AC004024.1-201ENST00000549244 247 ntBASIC3.65□□□□□ -1.83
CCNT1O60563 MED28P6-201ENST00000558776 231 ntBASIC3.65□□□□□ -1.83
CCNT1O60563 MIR5680-201ENST00000577577 84 ntBASIC3.65□□□□□ -1.83
CCNT1O60563 GLUD1P4-201ENST00000590914 418 ntBASIC3.65□□□□□ -1.83
CCNT1O60563 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.65□□□□□ -1.83
CCNT1O60563 Z84480.1-201ENST00000605131 311 ntBASIC3.65□□□□□ -1.83
CCNT1O60563 CR381653.2-201ENST00000624041 768 ntBASIC3.65□□□□□ -1.83
CCNT1O60563 AC091903.1-201ENST00000624322 454 ntBASIC3.65□□□□□ -1.83
CCNT1O60563 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CCNT1O60563 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CCNT1O60563 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.65□□□□□ -1.83
CCNT1O60563 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.65□□□□□ -1.83
CCNT1O60563 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CCNT1O60563 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.64□□□□□ -1.83
CCNT1O60563 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.64□□□□□ -1.83
CCNT1O60563 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CCNT1O60563 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CCNT1O60563 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC3.64□□□□□ -1.83
CCNT1O60563 Y_RNA.1-201ENST00000352915 104 ntBASIC3.64□□□□□ -1.83
CCNT1O60563 SNORD46.1-201ENST00000364139 104 ntBASIC3.64□□□□□ -1.83
CCNT1O60563 RNU6-188P-201ENST00000364207 107 ntBASIC3.64□□□□□ -1.83
CCNT1O60563 RNU6-173P-201ENST00000364215 104 ntBASIC3.64□□□□□ -1.83
CCNT1O60563 RNY1P12-201ENST00000364251 105 ntBASIC3.64□□□□□ -1.83
CCNT1O60563 U3.11-201ENST00000364476 212 ntBASIC3.64□□□□□ -1.83
CCNT1O60563 Y_RNA.381-201ENST00000365666 102 ntBASIC3.64□□□□□ -1.83
CCNT1O60563 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
CCNT1O60563 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.64□□□□□ -1.83
CCNT1O60563 MIR1-2-201ENST00000384961 85 ntBASIC3.64□□□□□ -1.83
CCNT1O60563 U3.19-201ENST00000390893 196 ntBASIC3.64□□□□□ -1.83
CCNT1O60563 AC068050.1-201ENST00000394891 380 ntBASIC3.64□□□□□ -1.83
CCNT1O60563 RPL17P50-201ENST00000396131 546 ntBASIC3.64□□□□□ -1.83
CCNT1O60563 AL136372.1-201ENST00000403060 228 ntBASIC3.64□□□□□ -1.83
CCNT1O60563 FCF1P9-201ENST00000412546 282 ntBASIC3.64□□□□□ -1.83
CCNT1O60563 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.64□□□□□ -1.83
CCNT1O60563 AC002486.1-201ENST00000435098 391 ntBASIC3.64□□□□□ -1.83
CCNT1O60563 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC3.64□□□□□ -1.83
CCNT1O60563 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC3.64□□□□□ -1.83
CCNT1O60563 AC093899.1-201ENST00000457984 376 ntBASIC3.64□□□□□ -1.83
CCNT1O60563 RPL23AP14-201ENST00000468281 468 ntBASIC3.64□□□□□ -1.83
CCNT1O60563 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC3.64□□□□□ -1.83
CCNT1O60563 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.64□□□□□ -1.83
CCNT1O60563 AC007182.2-201ENST00000489251 402 ntBASIC3.64□□□□□ -1.83
CCNT1O60563 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CCNT1O60563 HMGB1P29-201ENST00000505659 499 ntBASIC3.64□□□□□ -1.83
CCNT1O60563 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.64□□□□□ -1.83
CCNT1O60563 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC3.64□□□□□ -1.83
CCNT1O60563 RNU6-390P-201ENST00000516259 103 ntBASIC3.64□□□□□ -1.83
CCNT1O60563 RN7SKP289-201ENST00000517244 295 ntBASIC3.64□□□□□ -1.83
CCNT1O60563 RNU6-840P-201ENST00000517275 65 ntBASIC3.64□□□□□ -1.83
CCNT1O60563 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC3.64□□□□□ -1.83
CCNT1O60563 uc_338.25-201ENST00000613756 156 ntBASIC3.64□□□□□ -1.83
CCNT1O60563 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.64□□□□□ -1.83
CCNT1O60563 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CCNT1O60563 MTND5P1-201ENST00000445440 1375 ntBASIC3.63□□□□□ -1.83
CCNT1O60563 AC005832.2-201ENST00000538921 1430 ntBASIC3.63□□□□□ -1.83
CCNT1O60563 RPL7P26-201ENST00000333817 754 ntBASIC3.63□□□□□ -1.83
CCNT1O60563 Y_RNA.22-201ENST00000362492 102 ntBASIC3.63□□□□□ -1.83
CCNT1O60563 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CCNT1O60563 AC110754.1-201ENST00000399740 601 ntBASIC3.63□□□□□ -1.83
CCNT1O60563 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms