Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
GRIN3BO60391 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
GRIN3BO60391 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
GRIN3BO60391 SNORA33.2-201ENST00000365413 134 ntBASIC5.04□□□□□ -1.6
GRIN3BO60391 RNU6-946P-201ENST00000383878 107 ntBASIC5.04□□□□□ -1.6
GRIN3BO60391 RNU6-1127P-201ENST00000384580 107 ntBASIC5.04□□□□□ -1.6
GRIN3BO60391 AL138785.1-201ENST00000425821 331 ntBASIC5.04□□□□□ -1.6
GRIN3BO60391 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC5.04□□□□□ -1.6
GRIN3BO60391 AF228730.2-201ENST00000438784 848 ntBASIC5.04□□□□□ -1.6
GRIN3BO60391 SUMO1P3-201ENST00000439961 304 ntBASIC5.04□□□□□ -1.6
GRIN3BO60391 GAS5-223ENST00000452197 483 ntTSL 3 BASIC5.04□□□□□ -1.6
GRIN3BO60391 snoU13.3-201ENST00000459441 104 ntBASIC5.04□□□□□ -1.6
GRIN3BO60391 AC108751.2-201ENST00000469993 231 ntBASIC5.04□□□□□ -1.6
GRIN3BO60391 RPL21P93-201ENST00000480465 489 ntBASIC5.04□□□□□ -1.6
GRIN3BO60391 AL163540.1-201ENST00000485382 386 ntBASIC5.04□□□□□ -1.6
GRIN3BO60391 AC104619.4-201ENST00000510773 249 ntBASIC5.04□□□□□ -1.6
GRIN3BO60391 AC026801.2-201ENST00000515352 425 ntBASIC5.04□□□□□ -1.6
GRIN3BO60391 RNU6-189P-201ENST00000516120 101 ntBASIC5.04□□□□□ -1.6
GRIN3BO60391 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
GRIN3BO60391 APOOP3-201ENST00000536787 586 ntBASIC5.04□□□□□ -1.6
GRIN3BO60391 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC5.04□□□□□ -1.6
GRIN3BO60391 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC5.04□□□□□ -1.6
GRIN3BO60391 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC5.04□□□□□ -1.6
GRIN3BO60391 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC5.04□□□□□ -1.6
GRIN3BO60391 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC5.04□□□□□ -1.6
GRIN3BO60391 AC023043.2-201ENST00000589678 1026 ntBASIC5.04□□□□□ -1.6
GRIN3BO60391 AC136443.5-201ENST00000603741 370 ntBASIC5.04□□□□□ -1.6
GRIN3BO60391 AL355598.1-201ENST00000604169 202 ntBASIC5.04□□□□□ -1.6
GRIN3BO60391 AC104662.1-201ENST00000604448 511 ntBASIC5.04□□□□□ -1.6
GRIN3BO60391 AL034351.1-201ENST00000605288 668 ntBASIC5.04□□□□□ -1.6
GRIN3BO60391 AL132822.1-201ENST00000617063 513 ntBASIC5.04□□□□□ -1.6
GRIN3BO60391 7SK.10-201ENST00000621414 298 ntBASIC5.04□□□□□ -1.6
GRIN3BO60391 AC110801.1-201ENST00000623590 212 ntBASIC5.04□□□□□ -1.6
GRIN3BO60391 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC5.04□□□□□ -1.6
GRIN3BO60391 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC5.04□□□□□ -1.6
GRIN3BO60391 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
GRIN3BO60391 AC093591.2-201ENST00000565254 3843 ntBASIC5.04□□□□□ -1.6
GRIN3BO60391 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC5.04□□□□□ -1.6
GRIN3BO60391 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC5.03□□□□□ -1.6
GRIN3BO60391 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
GRIN3BO60391 MTND5P16-201ENST00000460269 1703 ntBASIC5.03□□□□□ -1.6
GRIN3BO60391 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC5.03□□□□□ -1.6
GRIN3BO60391 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.03□□□□□ -1.6
GRIN3BO60391 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
GRIN3BO60391 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
GRIN3BO60391 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.03□□□□□ -1.6
GRIN3BO60391 Y_RNA.187-201ENST00000363918 113 ntBASIC5.03□□□□□ -1.6
GRIN3BO60391 Y_RNA.445-201ENST00000384168 102 ntBASIC5.03□□□□□ -1.6
GRIN3BO60391 RNU6-331P-201ENST00000384724 107 ntBASIC5.03□□□□□ -1.6
GRIN3BO60391 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
GRIN3BO60391 AL360182.1-201ENST00000397433 468 ntBASIC5.03□□□□□ -1.6
GRIN3BO60391 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC5.03□□□□□ -1.6
GRIN3BO60391 ACTR3BP6-201ENST00000422332 1241 ntBASIC5.03□□□□□ -1.6
GRIN3BO60391 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC5.03□□□□□ -1.6
GRIN3BO60391 AC093106.2-201ENST00000428212 385 ntBASIC5.03□□□□□ -1.6
GRIN3BO60391 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC5.03□□□□□ -1.6
GRIN3BO60391 TRAPPC2P9-201ENST00000434556 343 ntBASIC5.03□□□□□ -1.6
GRIN3BO60391 FABP5P14-201ENST00000437273 393 ntBASIC5.03□□□□□ -1.6
GRIN3BO60391 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC5.03□□□□□ -1.6
GRIN3BO60391 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC5.03□□□□□ -1.6
GRIN3BO60391 RPL29P29-201ENST00000448725 423 ntBASIC5.03□□□□□ -1.6
GRIN3BO60391 RPS15AP27-201ENST00000449183 343 ntBASIC5.03□□□□□ -1.6
GRIN3BO60391 AC115115.1-201ENST00000449927 248 ntBASIC5.03□□□□□ -1.6
GRIN3BO60391 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
GRIN3BO60391 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC5.03□□□□□ -1.6
GRIN3BO60391 SCARNA18-201ENST00000459004 134 ntBASIC5.03□□□□□ -1.6
GRIN3BO60391 AC010631.1-201ENST00000474150 156 ntBASIC5.03□□□□□ -1.6
GRIN3BO60391 RPL7P43-201ENST00000478876 753 ntBASIC5.03□□□□□ -1.6
GRIN3BO60391 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC5.03□□□□□ -1.6
GRIN3BO60391 RNU6-1095P-201ENST00000516148 108 ntBASIC5.03□□□□□ -1.6
GRIN3BO60391 STX3-204ENST00000530221 534 ntTSL 5 BASIC5.03□□□□□ -1.6
GRIN3BO60391 AL161713.1-201ENST00000555538 145 ntBASIC5.03□□□□□ -1.6
GRIN3BO60391 AC015912.2-201ENST00000571053 181 ntBASIC5.03□□□□□ -1.6
GRIN3BO60391 MIR4790-201ENST00000577799 79 ntBASIC5.03□□□□□ -1.6
GRIN3BO60391 TEX41-280ENST00000629185 591 ntTSL 5 BASIC5.03□□□□□ -1.6
GRIN3BO60391 AC233263.6-201ENST00000631132 1963 ntBASIC5.03□□□□□ -1.6
GRIN3BO60391 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
GRIN3BO60391 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC5.03□□□□□ -1.6
GRIN3BO60391 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC5.03□□□□□ -1.6
GRIN3BO60391 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
GRIN3BO60391 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
GRIN3BO60391 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.03□□□□□ -1.6
GRIN3BO60391 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
GRIN3BO60391 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
GRIN3BO60391 AL592437.2-201ENST00000421655 2434 ntBASIC5.02□□□□□ -1.61
GRIN3BO60391 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
GRIN3BO60391 Y_RNA.145-201ENST00000363527 102 ntBASIC5.02□□□□□ -1.61
GRIN3BO60391 RNU6-1155P-201ENST00000363554 107 ntBASIC5.02□□□□□ -1.61
GRIN3BO60391 Y_RNA.197-201ENST00000364004 102 ntBASIC5.02□□□□□ -1.61
GRIN3BO60391 CRP-202ENST00000368110 667 ntTSL 3 BASIC5.02□□□□□ -1.61
GRIN3BO60391 RNU1-63P-201ENST00000383902 164 ntBASIC5.02□□□□□ -1.61
GRIN3BO60391 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
GRIN3BO60391 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
GRIN3BO60391 RNU6-370P-201ENST00000411008 104 ntBASIC5.02□□□□□ -1.61
GRIN3BO60391 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
GRIN3BO60391 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
GRIN3BO60391 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC5.02□□□□□ -1.61
GRIN3BO60391 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC5.02□□□□□ -1.61
GRIN3BO60391 RPS26P2-201ENST00000440331 348 ntBASIC5.02□□□□□ -1.61
GRIN3BO60391 AL590399.6-201ENST00000446396 307 ntBASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms