Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.38□□□□□ -2.03
CHMP2AO43633 AL139421.1-201ENST00000423010 169 ntBASIC2.38□□□□□ -2.03
CHMP2AO43633 AC092047.1-201ENST00000424997 240 ntBASIC2.38□□□□□ -2.03
CHMP2AO43633 DPRXP1-201ENST00000426312 460 ntBASIC2.38□□□□□ -2.03
CHMP2AO43633 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC2.38□□□□□ -2.03
CHMP2AO43633 Z82210.1-201ENST00000440037 231 ntBASIC2.38□□□□□ -2.03
CHMP2AO43633 CBWD4P-201ENST00000445695 655 ntBASIC2.38□□□□□ -2.03
CHMP2AO43633 IFNA11P-201ENST00000446352 526 ntBASIC2.38□□□□□ -2.03
CHMP2AO43633 COX6CP12-201ENST00000446748 202 ntBASIC2.38□□□□□ -2.03
CHMP2AO43633 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC2.38□□□□□ -2.03
CHMP2AO43633 MTCYBP11-201ENST00000447254 1109 ntBASIC2.38□□□□□ -2.03
CHMP2AO43633 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
CHMP2AO43633 AL118520.1-201ENST00000450770 291 ntBASIC2.38□□□□□ -2.03
CHMP2AO43633 TRGVB-201ENST00000453257 471 ntBASIC2.38□□□□□ -2.03
CHMP2AO43633 AC114786.4-201ENST00000508771 728 ntBASIC2.38□□□□□ -2.03
CHMP2AO43633 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.38□□□□□ -2.03
CHMP2AO43633 AC114797.1-201ENST00000514003 728 ntBASIC2.38□□□□□ -2.03
CHMP2AO43633 RNY4P37-201ENST00000516225 96 ntBASIC2.38□□□□□ -2.03
CHMP2AO43633 AC022861.1-201ENST00000522981 663 ntBASIC2.38□□□□□ -2.03
CHMP2AO43633 SUB1P1-201ENST00000524415 382 ntBASIC2.38□□□□□ -2.03
CHMP2AO43633 DEFB130C-202ENST00000530001 230 ntBASIC2.38□□□□□ -2.03
CHMP2AO43633 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.38□□□□□ -2.03
CHMP2AO43633 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC2.38□□□□□ -2.03
CHMP2AO43633 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC2.38□□□□□ -2.03
CHMP2AO43633 AC023824.2-201ENST00000566185 400 ntBASIC2.38□□□□□ -2.03
CHMP2AO43633 AC005951.2-201ENST00000576282 495 ntBASIC2.38□□□□□ -2.03
CHMP2AO43633 MIR4637-201ENST00000582405 84 ntBASIC2.38□□□□□ -2.03
CHMP2AO43633 AL158211.4-201ENST00000606988 584 ntBASIC2.38□□□□□ -2.03
CHMP2AO43633 AC011890.2-201ENST00000613393 294 ntBASIC2.38□□□□□ -2.03
CHMP2AO43633 AC093591.3-201ENST00000634516 308 ntBASIC2.38□□□□□ -2.03
CHMP2AO43633 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
CHMP2AO43633 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
CHMP2AO43633 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
CHMP2AO43633 RNU5E-8P-201ENST00000363502 116 ntBASIC2.37□□□□□ -2.03
CHMP2AO43633 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC2.37□□□□□ -2.03
CHMP2AO43633 RNU6-217P-201ENST00000384164 104 ntBASIC2.37□□□□□ -2.03
CHMP2AO43633 MIR506-201ENST00000384998 124 ntBASIC2.37□□□□□ -2.03
CHMP2AO43633 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.37□□□□□ -2.03
CHMP2AO43633 AC068533.2-201ENST00000411872 306 ntBASIC2.37□□□□□ -2.03
CHMP2AO43633 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC2.37□□□□□ -2.03
CHMP2AO43633 AC005005.2-201ENST00000420779 380 ntBASIC2.37□□□□□ -2.03
CHMP2AO43633 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC2.37□□□□□ -2.03
CHMP2AO43633 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC2.37□□□□□ -2.03
CHMP2AO43633 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC2.37□□□□□ -2.03
CHMP2AO43633 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.37□□□□□ -2.03
CHMP2AO43633 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC2.37□□□□□ -2.03
CHMP2AO43633 AC104629.1-201ENST00000494226 508 ntBASIC2.37□□□□□ -2.03
CHMP2AO43633 AC016550.1-201ENST00000505348 785 ntBASIC2.37□□□□□ -2.03
CHMP2AO43633 AC092436.1-201ENST00000506450 503 ntBASIC2.37□□□□□ -2.03
CHMP2AO43633 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.37□□□□□ -2.03
CHMP2AO43633 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC2.37□□□□□ -2.03
CHMP2AO43633 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.37□□□□□ -2.03
CHMP2AO43633 RNA5SP402-201ENST00000517148 110 ntBASIC2.37□□□□□ -2.03
CHMP2AO43633 RNU6-1028P-201ENST00000517164 93 ntBASIC2.37□□□□□ -2.03
CHMP2AO43633 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.37□□□□□ -2.03
CHMP2AO43633 AC022634.1-201ENST00000520765 532 ntBASIC2.37□□□□□ -2.03
CHMP2AO43633 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.37□□□□□ -2.03
CHMP2AO43633 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.37□□□□□ -2.03
CHMP2AO43633 HSPE1P3-201ENST00000559254 309 ntBASIC2.37□□□□□ -2.03
CHMP2AO43633 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.37□□□□□ -2.03
CHMP2AO43633 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.37□□□□□ -2.03
CHMP2AO43633 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.37□□□□□ -2.03
CHMP2AO43633 AC013562.2-201ENST00000611632 603 ntBASIC2.37□□□□□ -2.03
CHMP2AO43633 AC120349.2-201ENST00000625002 298 ntBASIC2.37□□□□□ -2.03
CHMP2AO43633 CU459211.1-201ENST00000635667 749 ntBASIC2.37□□□□□ -2.03
CHMP2AO43633 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.37□□□□□ -2.03
CHMP2AO43633 AC080128.1-201ENST00000474389 1917 ntBASIC2.36□□□□□ -2.03
CHMP2AO43633 RNU6-343P-201ENST00000364709 104 ntBASIC2.36□□□□□ -2.03
CHMP2AO43633 Y_RNA.472-201ENST00000384322 102 ntBASIC2.36□□□□□ -2.03
CHMP2AO43633 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
CHMP2AO43633 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.36□□□□□ -2.03
CHMP2AO43633 GTF2IP7-202ENST00000436677 309 ntBASIC2.36□□□□□ -2.03
CHMP2AO43633 Z80107.1-201ENST00000436830 412 ntBASIC2.36□□□□□ -2.03
CHMP2AO43633 SDCBPP1-201ENST00000440192 890 ntBASIC2.36□□□□□ -2.03
CHMP2AO43633 AC004263.1-201ENST00000479327 332 ntBASIC2.36□□□□□ -2.03
CHMP2AO43633 AC008427.1-201ENST00000503102 655 ntBASIC2.36□□□□□ -2.03
CHMP2AO43633 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.36□□□□□ -2.03
CHMP2AO43633 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.36□□□□□ -2.03
CHMP2AO43633 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC2.36□□□□□ -2.03
CHMP2AO43633 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC2.36□□□□□ -2.03
CHMP2AO43633 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC2.36□□□□□ -2.03
CHMP2AO43633 AGGF1P5-201ENST00000567900 919 ntBASIC2.36□□□□□ -2.03
CHMP2AO43633 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.36□□□□□ -2.03
CHMP2AO43633 MTND3P13-201ENST00000574391 343 ntBASIC2.36□□□□□ -2.03
CHMP2AO43633 AC126365.2-201ENST00000580630 379 ntBASIC2.36□□□□□ -2.03
CHMP2AO43633 AL606834.3-201ENST00000602615 496 ntBASIC2.36□□□□□ -2.03
CHMP2AO43633 AL390208.1-201ENST00000605885 644 ntBASIC2.36□□□□□ -2.03
CHMP2AO43633 AC008498.1-201ENST00000613012 531 ntBASIC2.36□□□□□ -2.03
CHMP2AO43633 Y_RNA.783-201ENST00000613546 102 ntBASIC2.36□□□□□ -2.03
CHMP2AO43633 AL596245.1-201ENST00000618994 362 ntBASIC2.36□□□□□ -2.03
CHMP2AO43633 AC110994.2-201ENST00000635481 492 ntBASIC2.36□□□□□ -2.03
CHMP2AO43633 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC2.36□□□□□ -2.03
CHMP2AO43633 DDX10P1-201ENST00000448545 1933 ntBASIC2.36□□□□□ -2.03
CHMP2AO43633 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
CHMP2AO43633 MTND4P35-201ENST00000604257 1375 ntBASIC2.36□□□□□ -2.03
CHMP2AO43633 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.35□□□□□ -2.03
CHMP2AO43633 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
CHMP2AO43633 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
CHMP2AO43633 RNU6-224P-201ENST00000384055 107 ntBASIC2.35□□□□□ -2.03
CHMP2AO43633 SNORA48.3-201ENST00000391081 134 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms