Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
HOXA2O43364 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
HOXA2O43364 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.71□□□□□ -1.5
HOXA2O43364 AL139811.1-201ENST00000424779 2299 ntBASIC5.71□□□□□ -1.5
HOXA2O43364 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
HOXA2O43364 Y_RNA.81-201ENST00000362997 102 ntBASIC5.71□□□□□ -1.5
HOXA2O43364 Y_RNA.569-201ENST00000384749 103 ntBASIC5.71□□□□□ -1.5
HOXA2O43364 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
HOXA2O43364 BTF3L4P2-201ENST00000392798 346 ntBASIC5.71□□□□□ -1.5
HOXA2O43364 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC5.71□□□□□ -1.5
HOXA2O43364 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.71□□□□□ -1.5
HOXA2O43364 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC5.71□□□□□ -1.5
HOXA2O43364 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.71□□□□□ -1.5
HOXA2O43364 AC005002.2-201ENST00000438228 269 ntBASIC5.71□□□□□ -1.5
HOXA2O43364 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC5.71□□□□□ -1.5
HOXA2O43364 GLUD1P3-202ENST00000508551 200 ntBASIC5.71□□□□□ -1.5
HOXA2O43364 RN7SKP67-201ENST00000515905 235 ntBASIC5.71□□□□□ -1.5
HOXA2O43364 AL121603.1-201ENST00000553815 142 ntBASIC5.71□□□□□ -1.5
HOXA2O43364 AL161713.1-201ENST00000555538 145 ntBASIC5.71□□□□□ -1.5
HOXA2O43364 AC011487.3-201ENST00000593607 453 ntBASIC5.71□□□□□ -1.5
HOXA2O43364 AC104465.1-201ENST00000611365 139 ntBASIC5.71□□□□□ -1.5
HOXA2O43364 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC5.71□□□□□ -1.5
HOXA2O43364 AC091905.4-201ENST00000623432 202 ntBASIC5.71□□□□□ -1.5
HOXA2O43364 BMS1P21-201ENST00000634565 365 ntBASIC5.71□□□□□ -1.5
HOXA2O43364 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC5.71□□□□□ -1.5
HOXA2O43364 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HOXA2O43364 ZNF826P-207ENST00000622273 1910 ntBASIC5.71□□□□□ -1.5
HOXA2O43364 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.71□□□□□ -1.5
HOXA2O43364 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
HOXA2O43364 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HOXA2O43364 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HOXA2O43364 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.71□□□□□ -1.5
HOXA2O43364 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HOXA2O43364 BX322639.1-202ENST00000423987 2213 ntBASIC5.7□□□□□ -1.5
HOXA2O43364 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.7□□□□□ -1.5
HOXA2O43364 INTS6P1-201ENST00000504674 2530 ntBASIC5.7□□□□□ -1.5
HOXA2O43364 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC5.7□□□□□ -1.5
HOXA2O43364 AL731532.2-201ENST00000623542 1953 ntBASIC5.7□□□□□ -1.5
HOXA2O43364 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.7□□□□□ -1.5
HOXA2O43364 Y_RNA.275-201ENST00000364726 110 ntBASIC5.7□□□□□ -1.5
HOXA2O43364 RNU6-926P-201ENST00000384075 107 ntBASIC5.7□□□□□ -1.5
HOXA2O43364 RNU6-21P-201ENST00000384710 107 ntBASIC5.7□□□□□ -1.5
HOXA2O43364 RN7SKP216-201ENST00000411050 312 ntBASIC5.7□□□□□ -1.5
HOXA2O43364 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC5.7□□□□□ -1.5
HOXA2O43364 MAP1LC3BP1-201ENST00000417653 379 ntBASIC5.7□□□□□ -1.5
HOXA2O43364 AC073465.2-201ENST00000440938 498 ntBASIC5.7□□□□□ -1.5
HOXA2O43364 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC5.7□□□□□ -1.5
HOXA2O43364 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.7□□□□□ -1.5
HOXA2O43364 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC5.7□□□□□ -1.5
HOXA2O43364 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC5.7□□□□□ -1.5
HOXA2O43364 AP001324.2-201ENST00000461163 319 ntBASIC5.7□□□□□ -1.5
HOXA2O43364 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC5.7□□□□□ -1.5
HOXA2O43364 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC5.7□□□□□ -1.5
HOXA2O43364 ATP5F1P5-201ENST00000526403 760 ntBASIC5.7□□□□□ -1.5
HOXA2O43364 MRPS18CP4-201ENST00000535821 231 ntBASIC5.7□□□□□ -1.5
HOXA2O43364 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.7□□□□□ -1.5
HOXA2O43364 MIR6748-201ENST00000610433 71 ntBASIC5.7□□□□□ -1.5
HOXA2O43364 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC5.7□□□□□ -1.5
HOXA2O43364 AL365265.1-201ENST00000621045 234 ntBASIC5.7□□□□□ -1.5
HOXA2O43364 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
HOXA2O43364 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
HOXA2O43364 AC116096.1-201ENST00000566804 2314 ntBASIC5.7□□□□□ -1.5
HOXA2O43364 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.7□□□□□ -1.5
HOXA2O43364 OR4G2P-202ENST00000641004 1759 ntBASIC5.7□□□□□ -1.5
HOXA2O43364 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HOXA2O43364 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HOXA2O43364 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
HOXA2O43364 AC008725.1-201ENST00000605123 2263 ntBASIC5.69□□□□□ -1.5
HOXA2O43364 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
HOXA2O43364 LINC01109-201ENST00000603837 3081 ntBASIC5.69□□□□□ -1.5
HOXA2O43364 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HOXA2O43364 RNU6-222P-201ENST00000362438 107 ntBASIC5.69□□□□□ -1.5
HOXA2O43364 U3.3-201ENST00000362986 216 ntBASIC5.69□□□□□ -1.5
HOXA2O43364 SNORA70.9-201ENST00000384370 135 ntBASIC5.69□□□□□ -1.5
HOXA2O43364 RN7SKP114-201ENST00000410327 279 ntBASIC5.69□□□□□ -1.5
HOXA2O43364 RNU6-394P-201ENST00000410735 107 ntBASIC5.69□□□□□ -1.5
HOXA2O43364 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC5.69□□□□□ -1.5
HOXA2O43364 Y_RNA.638-201ENST00000459374 113 ntBASIC5.69□□□□□ -1.5
HOXA2O43364 AC083982.1-201ENST00000485679 344 ntBASIC5.69□□□□□ -1.5
HOXA2O43364 H3F3AP1-201ENST00000559984 334 ntBASIC5.69□□□□□ -1.5
HOXA2O43364 AC009962.1-201ENST00000567327 3813 ntBASIC5.69□□□□□ -1.5
HOXA2O43364 MIR4282-201ENST00000583613 67 ntBASIC5.69□□□□□ -1.5
HOXA2O43364 MIR4420-201ENST00000583944 77 ntBASIC5.69□□□□□ -1.5
HOXA2O43364 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.69□□□□□ -1.5
HOXA2O43364 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HOXA2O43364 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HOXA2O43364 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HOXA2O43364 AC233981.2-201ENST00000611524 1614 ntBASIC5.69□□□□□ -1.5
HOXA2O43364 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.69□□□□□ -1.5
HOXA2O43364 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
HOXA2O43364 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.69□□□□□ -1.5
HOXA2O43364 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.69□□□□□ -1.5
HOXA2O43364 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.69□□□□□ -1.5
HOXA2O43364 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
HOXA2O43364 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
HOXA2O43364 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.68□□□□□ -1.5
HOXA2O43364 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC5.68□□□□□ -1.5
HOXA2O43364 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
HOXA2O43364 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HOXA2O43364 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms