Protein–RNA interactions for Protein: O15551

CLDN3, Claudin-3, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN3O15551 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.74□□□□□ -1.97
CLDN3O15551 ZNF29P-201ENST00000225587 168 ntBASIC2.74□□□□□ -1.97
CLDN3O15551 U3.12-201ENST00000364498 214 ntBASIC2.74□□□□□ -1.97
CLDN3O15551 RNU6-906P-201ENST00000384700 70 ntBASIC2.74□□□□□ -1.97
CLDN3O15551 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.74□□□□□ -1.97
CLDN3O15551 AL356057.2-201ENST00000403318 432 ntBASIC2.74□□□□□ -1.97
CLDN3O15551 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.74□□□□□ -1.97
CLDN3O15551 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC2.74□□□□□ -1.97
CLDN3O15551 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.74□□□□□ -1.97
CLDN3O15551 MTCO2P20-201ENST00000437339 673 ntBASIC2.74□□□□□ -1.97
CLDN3O15551 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC2.74□□□□□ -1.97
CLDN3O15551 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC2.74□□□□□ -1.97
CLDN3O15551 WDR78-207ENST00000488333 613 ntTSL 3 BASIC2.74□□□□□ -1.97
CLDN3O15551 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC2.74□□□□□ -1.97
CLDN3O15551 AC105252.1-201ENST00000503089 286 ntBASIC2.74□□□□□ -1.97
CLDN3O15551 UBE2V1P12-201ENST00000503954 474 ntBASIC2.74□□□□□ -1.97
CLDN3O15551 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.74□□□□□ -1.97
CLDN3O15551 CDC42P4-201ENST00000510507 563 ntBASIC2.74□□□□□ -1.97
CLDN3O15551 TBCAP3-201ENST00000512475 312 ntBASIC2.74□□□□□ -1.97
CLDN3O15551 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC2.74□□□□□ -1.97
CLDN3O15551 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.74□□□□□ -1.97
CLDN3O15551 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.74□□□□□ -1.97
CLDN3O15551 MTATP6P9-201ENST00000515039 680 ntBASIC2.74□□□□□ -1.97
CLDN3O15551 RPPH1-2P-201ENST00000516688 293 ntBASIC2.74□□□□□ -1.97
CLDN3O15551 RN7SKP40-201ENST00000517211 242 ntBASIC2.74□□□□□ -1.97
CLDN3O15551 RPL7P20-201ENST00000520308 745 ntBASIC2.74□□□□□ -1.97
CLDN3O15551 AP000889.1-201ENST00000530968 660 ntBASIC2.74□□□□□ -1.97
CLDN3O15551 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.74□□□□□ -1.97
CLDN3O15551 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.74□□□□□ -1.97
CLDN3O15551 GLYCAM1-201ENST00000546596 285 ntBASIC2.74□□□□□ -1.97
CLDN3O15551 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.74□□□□□ -1.97
CLDN3O15551 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC2.74□□□□□ -1.97
CLDN3O15551 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.74□□□□□ -1.97
CLDN3O15551 OR1M4P-201ENST00000589199 287 ntBASIC2.74□□□□□ -1.97
CLDN3O15551 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC2.74□□□□□ -1.97
CLDN3O15551 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC2.74□□□□□ -1.97
CLDN3O15551 RNU6-88P-201ENST00000606801 100 ntBASIC2.74□□□□□ -1.97
CLDN3O15551 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC2.74□□□□□ -1.97
CLDN3O15551 AL139022.2-201ENST00000606934 443 ntBASIC2.74□□□□□ -1.97
CLDN3O15551 AL359198.2-201ENST00000611836 194 ntBASIC2.74□□□□□ -1.97
CLDN3O15551 AL109620.1-201ENST00000618738 1197 ntBASIC2.74□□□□□ -1.97
CLDN3O15551 AC112204.3-201ENST00000623822 332 ntBASIC2.74□□□□□ -1.97
CLDN3O15551 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.74□□□□□ -1.97
CLDN3O15551 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.74□□□□□ -1.97
CLDN3O15551 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.74□□□□□ -1.97
CLDN3O15551 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
CLDN3O15551 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
CLDN3O15551 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
CLDN3O15551 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
CLDN3O15551 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
CLDN3O15551 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
CLDN3O15551 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.73□□□□□ -1.97
CLDN3O15551 RNU6-884P-201ENST00000363889 107 ntBASIC2.73□□□□□ -1.97
CLDN3O15551 SET-203ENST00000372688 801 ntTSL 2 BASIC2.73□□□□□ -1.97
CLDN3O15551 MTCO2P23-201ENST00000425216 680 ntBASIC2.73□□□□□ -1.97
CLDN3O15551 AC098614.2-201ENST00000426040 255 ntBASIC2.73□□□□□ -1.97
CLDN3O15551 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.73□□□□□ -1.97
CLDN3O15551 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.73□□□□□ -1.97
CLDN3O15551 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC2.73□□□□□ -1.97
CLDN3O15551 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.73□□□□□ -1.97
CLDN3O15551 DPPA3P1-201ENST00000448050 469 ntBASIC2.73□□□□□ -1.97
CLDN3O15551 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC2.73□□□□□ -1.97
CLDN3O15551 RPL36AP51-201ENST00000487216 318 ntBASIC2.73□□□□□ -1.97
CLDN3O15551 AL160314.1-201ENST00000490836 438 ntBASIC2.73□□□□□ -1.97
CLDN3O15551 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC2.73□□□□□ -1.97
CLDN3O15551 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC2.73□□□□□ -1.97
CLDN3O15551 AC093809.1-201ENST00000509155 340 ntBASIC2.73□□□□□ -1.97
CLDN3O15551 AC113155.1-201ENST00000511141 769 ntBASIC2.73□□□□□ -1.97
CLDN3O15551 AC110760.3-202ENST00000515177 371 ntBASIC2.73□□□□□ -1.97
CLDN3O15551 RNA5SP290-201ENST00000517133 127 ntBASIC2.73□□□□□ -1.97
CLDN3O15551 AC022634.1-201ENST00000520765 532 ntBASIC2.73□□□□□ -1.97
CLDN3O15551 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC2.73□□□□□ -1.97
CLDN3O15551 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC2.73□□□□□ -1.97
CLDN3O15551 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.73□□□□□ -1.97
CLDN3O15551 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC2.73□□□□□ -1.97
CLDN3O15551 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.73□□□□□ -1.97
CLDN3O15551 AC009097.3-201ENST00000563557 1018 ntBASIC2.73□□□□□ -1.97
CLDN3O15551 AL592221.1-201ENST00000605266 382 ntBASIC2.73□□□□□ -1.97
CLDN3O15551 AC106052.1-201ENST00000608029 497 ntBASIC2.73□□□□□ -1.97
CLDN3O15551 AL136981.2-201ENST00000617319 734 ntBASIC2.73□□□□□ -1.97
CLDN3O15551 AC243829.7-201ENST00000633081 225 ntBASIC2.73□□□□□ -1.97
CLDN3O15551 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
CLDN3O15551 PCF11-AS1-201ENST00000602322 1516 ntBASIC2.73□□□□□ -1.97
CLDN3O15551 MIR449A-201ENST00000362113 91 ntBASIC2.72□□□□□ -1.97
CLDN3O15551 VTRNA1-1-201ENST00000363120 99 ntBASIC2.72□□□□□ -1.97
CLDN3O15551 RNA5SP456-201ENST00000364002 114 ntBASIC2.72□□□□□ -1.97
CLDN3O15551 AL359704.1-201ENST00000411586 781 ntBASIC2.72□□□□□ -1.97
CLDN3O15551 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.72□□□□□ -1.97
CLDN3O15551 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.72□□□□□ -1.97
CLDN3O15551 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
CLDN3O15551 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC2.72□□□□□ -1.97
CLDN3O15551 AP000705.1-201ENST00000454567 350 ntBASIC2.72□□□□□ -1.97
CLDN3O15551 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC2.72□□□□□ -1.97
CLDN3O15551 AC008571.1-201ENST00000467232 300 ntBASIC2.72□□□□□ -1.97
CLDN3O15551 RPS29P20-201ENST00000489592 171 ntBASIC2.72□□□□□ -1.97
CLDN3O15551 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.72□□□□□ -1.97
CLDN3O15551 MTND5P4-201ENST00000514978 288 ntBASIC2.72□□□□□ -1.97
CLDN3O15551 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.72□□□□□ -1.97
CLDN3O15551 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.72□□□□□ -1.97
CLDN3O15551 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms