Protein–RNA interactions for Protein: O00479

HMGN4, High mobility group nucleosome-binding domain-containing protein 4, humanhuman

Predictions only

Length 90 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4O00479 AP000560.1-201ENST00000624150 1937 ntBASIC1.09□□□□□ -2.23
HMGN4O00479 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
HMGN4O00479 AC016716.1-201ENST00000265882 708 ntBASIC1.09□□□□□ -2.23
HMGN4O00479 RNU6-173P-201ENST00000364215 104 ntBASIC1.09□□□□□ -2.23
HMGN4O00479 RNU1-148P-201ENST00000384472 162 ntBASIC1.09□□□□□ -2.23
HMGN4O00479 MIR147B-201ENST00000390185 80 ntBASIC1.09□□□□□ -2.23
HMGN4O00479 RN7SKP284-201ENST00000411002 343 ntBASIC1.09□□□□□ -2.23
HMGN4O00479 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.09□□□□□ -2.23
HMGN4O00479 AL161449.1-201ENST00000414531 1199 ntBASIC1.09□□□□□ -2.23
HMGN4O00479 OR51A5P-201ENST00000415429 942 ntBASIC1.09□□□□□ -2.23
HMGN4O00479 AC003685.2-201ENST00000422795 395 ntBASIC1.09□□□□□ -2.23
HMGN4O00479 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC1.09□□□□□ -2.23
HMGN4O00479 AC108667.1-201ENST00000428618 249 ntBASIC1.09□□□□□ -2.23
HMGN4O00479 TRAPPC13P1-201ENST00000435991 1062 ntBASIC1.09□□□□□ -2.23
HMGN4O00479 HSPE1P21-201ENST00000438283 308 ntBASIC1.09□□□□□ -2.23
HMGN4O00479 AL357134.1-201ENST00000445848 426 ntBASIC1.09□□□□□ -2.23
HMGN4O00479 AC009474.2-201ENST00000451383 136 ntBASIC1.09□□□□□ -2.23
HMGN4O00479 snoU109.1-201ENST00000459339 135 ntBASIC1.09□□□□□ -2.23
HMGN4O00479 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC1.09□□□□□ -2.23
HMGN4O00479 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.09□□□□□ -2.23
HMGN4O00479 RPL36AP21-201ENST00000490372 323 ntBASIC1.09□□□□□ -2.23
HMGN4O00479 RPL30P5-201ENST00000494923 336 ntBASIC1.09□□□□□ -2.23
HMGN4O00479 KATNBL1P4-201ENST00000503545 918 ntBASIC1.09□□□□□ -2.23
HMGN4O00479 AC112518.2-201ENST00000508565 425 ntBASIC1.09□□□□□ -2.23
HMGN4O00479 RNU6-928P-201ENST00000516876 104 ntBASIC1.09□□□□□ -2.23
HMGN4O00479 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC1.09□□□□□ -2.23
HMGN4O00479 OR4P1P-201ENST00000530808 1136 ntBASIC1.09□□□□□ -2.23
HMGN4O00479 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC1.09□□□□□ -2.23
HMGN4O00479 TRAV11-201ENST00000539512 339 ntBASIC1.09□□□□□ -2.23
HMGN4O00479 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC1.09□□□□□ -2.23
HMGN4O00479 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC1.09□□□□□ -2.23
HMGN4O00479 AC068135.2-201ENST00000569293 1028 ntBASIC1.09□□□□□ -2.23
HMGN4O00479 MIR4529-201ENST00000578110 78 ntBASIC1.09□□□□□ -2.23
HMGN4O00479 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC1.09□□□□□ -2.23
HMGN4O00479 AL050343.2-201ENST00000607338 280 ntBASIC1.09□□□□□ -2.23
HMGN4O00479 AC126118.1-201ENST00000607744 628 ntBASIC1.09□□□□□ -2.23
HMGN4O00479 AP002826.1-201ENST00000608835 315 ntBASIC1.09□□□□□ -2.23
HMGN4O00479 AC090116.1-201ENST00000615679 446 ntBASIC1.09□□□□□ -2.23
HMGN4O00479 AC131280.1-202ENST00000624067 4211 ntBASIC1.09□□□□□ -2.24
HMGN4O00479 AC008568.2-201ENST00000623862 2313 ntBASIC1.09□□□□□ -2.24
HMGN4O00479 WWP1P1-201ENST00000466609 2769 ntBASIC1.08□□□□□ -2.24
HMGN4O00479 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
HMGN4O00479 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
HMGN4O00479 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.08□□□□□ -2.24
HMGN4O00479 AL356432.1-201ENST00000405809 419 ntBASIC1.08□□□□□ -2.24
HMGN4O00479 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC1.08□□□□□ -2.24
HMGN4O00479 AL591704.2-201ENST00000421658 181 ntBASIC1.08□□□□□ -2.24
HMGN4O00479 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC1.08□□□□□ -2.24
HMGN4O00479 AL392003.1-201ENST00000434394 243 ntBASIC1.08□□□□□ -2.24
HMGN4O00479 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC1.08□□□□□ -2.24
HMGN4O00479 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC1.08□□□□□ -2.24
HMGN4O00479 FABP5P3-201ENST00000437960 408 ntBASIC1.08□□□□□ -2.24
HMGN4O00479 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC1.08□□□□□ -2.24
HMGN4O00479 RNU6-420P-201ENST00000458780 107 ntBASIC1.08□□□□□ -2.24
HMGN4O00479 AL121769.1-201ENST00000469473 401 ntBASIC1.08□□□□□ -2.24
HMGN4O00479 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.08□□□□□ -2.24
HMGN4O00479 AP000926.3-201ENST00000497201 299 ntBASIC1.08□□□□□ -2.24
HMGN4O00479 AC093770.1-201ENST00000511559 571 ntBASIC1.08□□□□□ -2.24
HMGN4O00479 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC1.08□□□□□ -2.24
HMGN4O00479 CBX3P7-201ENST00000532876 502 ntBASIC1.08□□□□□ -2.24
HMGN4O00479 AC025588.3-201ENST00000604182 274 ntBASIC1.08□□□□□ -2.24
HMGN4O00479 AP000254.1-201ENST00000609934 520 ntBASIC1.08□□□□□ -2.24
HMGN4O00479 AL353997.5-201ENST00000618886 171 ntBASIC1.08□□□□□ -2.24
HMGN4O00479 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.08□□□□□ -2.24
HMGN4O00479 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC1.08□□□□□ -2.24
HMGN4O00479 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC1.08□□□□□ -2.24
HMGN4O00479 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
HMGN4O00479 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.07□□□□□ -2.24
HMGN4O00479 ZNF702P-202ENST00000434269 1966 ntBASIC1.07□□□□□ -2.24
HMGN4O00479 SNORA23-201ENST00000365128 182 ntBASIC1.07□□□□□ -2.24
HMGN4O00479 RPL23AP29-201ENST00000397284 453 ntBASIC1.07□□□□□ -2.24
HMGN4O00479 MIR1303-201ENST00000408625 86 ntBASIC1.07□□□□□ -2.24
HMGN4O00479 RNU6-233P-201ENST00000410845 141 ntBASIC1.07□□□□□ -2.24
HMGN4O00479 RNU2-41P-201ENST00000410991 178 ntBASIC1.07□□□□□ -2.24
HMGN4O00479 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC1.07□□□□□ -2.24
HMGN4O00479 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC1.07□□□□□ -2.24
HMGN4O00479 AC096920.1-201ENST00000423991 241 ntBASIC1.07□□□□□ -2.24
HMGN4O00479 AC093106.2-201ENST00000428212 385 ntBASIC1.07□□□□□ -2.24
HMGN4O00479 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
HMGN4O00479 HSPE1P24-201ENST00000450782 238 ntBASIC1.07□□□□□ -2.24
HMGN4O00479 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC1.07□□□□□ -2.24
HMGN4O00479 RPL21P134-201ENST00000453468 483 ntBASIC1.07□□□□□ -2.24
HMGN4O00479 AC087884.1-201ENST00000469738 328 ntBASIC1.07□□□□□ -2.24
HMGN4O00479 AC025181.1-201ENST00000477507 416 ntBASIC1.07□□□□□ -2.24
HMGN4O00479 AC107032.1-201ENST00000485945 480 ntBASIC1.07□□□□□ -2.24
HMGN4O00479 AC021087.2-201ENST00000504656 1203 ntBASIC1.07□□□□□ -2.24
HMGN4O00479 AC008885.2-201ENST00000509506 930 ntBASIC1.07□□□□□ -2.24
HMGN4O00479 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.07□□□□□ -2.24
HMGN4O00479 OR5AL2P-201ENST00000532185 920 ntBASIC1.07□□□□□ -2.24
HMGN4O00479 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC1.07□□□□□ -2.24
HMGN4O00479 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
HMGN4O00479 AC012669.1-201ENST00000603209 283 ntBASIC1.07□□□□□ -2.24
HMGN4O00479 AL590410.1-201ENST00000617925 333 ntBASIC1.07□□□□□ -2.24
HMGN4O00479 AC091304.6-201ENST00000619761 202 ntBASIC1.07□□□□□ -2.24
HMGN4O00479 AL353770.2-201ENST00000620024 78 ntBASIC1.07□□□□□ -2.24
HMGN4O00479 AC097655.1-201ENST00000635075 318 ntBASIC1.07□□□□□ -2.24
HMGN4O00479 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
HMGN4O00479 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
HMGN4O00479 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.06□□□□□ -2.24
HMGN4O00479 RNA5SP276-201ENST00000362580 94 ntBASIC1.06□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms