Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.73□□□□□ -1.97
PDLIM1O00151 AC124947.2-202ENST00000552735 133 ntBASIC2.73□□□□□ -1.97
PDLIM1O00151 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC2.73□□□□□ -1.97
PDLIM1O00151 MYL12BP1-201ENST00000569826 507 ntBASIC2.73□□□□□ -1.97
PDLIM1O00151 AC005951.2-201ENST00000576282 495 ntBASIC2.73□□□□□ -1.97
PDLIM1O00151 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC2.73□□□□□ -1.97
PDLIM1O00151 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.73□□□□□ -1.97
PDLIM1O00151 Z99289.3-201ENST00000605586 594 ntBASIC2.73□□□□□ -1.97
PDLIM1O00151 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
PDLIM1O00151 AC010133.1-201ENST00000615809 842 ntBASIC2.73□□□□□ -1.97
PDLIM1O00151 AC090132.2-201ENST00000615881 347 ntBASIC2.73□□□□□ -1.97
PDLIM1O00151 AC099506.2-201ENST00000623074 221 ntBASIC2.73□□□□□ -1.97
PDLIM1O00151 AC079416.3-201ENST00000624479 549 ntBASIC2.73□□□□□ -1.97
PDLIM1O00151 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC2.73□□□□□ -1.97
PDLIM1O00151 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.73□□□□□ -1.97
PDLIM1O00151 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.72□□□□□ -1.97
PDLIM1O00151 PABPC1P9-201ENST00000426076 1612 ntBASIC2.72□□□□□ -1.97
PDLIM1O00151 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
PDLIM1O00151 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.72□□□□□ -1.97
PDLIM1O00151 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC2.72□□□□□ -1.97
PDLIM1O00151 MIR325-201ENST00000385260 98 ntBASIC2.72□□□□□ -1.97
PDLIM1O00151 AL109755.1-201ENST00000401791 649 ntBASIC2.72□□□□□ -1.97
PDLIM1O00151 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC2.72□□□□□ -1.97
PDLIM1O00151 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC2.72□□□□□ -1.97
PDLIM1O00151 RPS27AP14-201ENST00000422868 454 ntBASIC2.72□□□□□ -1.97
PDLIM1O00151 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.72□□□□□ -1.97
PDLIM1O00151 ELOCP30-201ENST00000447108 299 ntBASIC2.72□□□□□ -1.97
PDLIM1O00151 RPL27AP5-201ENST00000469428 449 ntBASIC2.72□□□□□ -1.97
PDLIM1O00151 RPS3AP22-201ENST00000488297 769 ntBASIC2.72□□□□□ -1.97
PDLIM1O00151 AC055855.1-201ENST00000489563 579 ntBASIC2.72□□□□□ -1.97
PDLIM1O00151 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC2.72□□□□□ -1.97
PDLIM1O00151 RAC1P5-201ENST00000512182 576 ntBASIC2.72□□□□□ -1.97
PDLIM1O00151 TTC39CP1-201ENST00000512513 755 ntBASIC2.72□□□□□ -1.97
PDLIM1O00151 AC008885.1-201ENST00000514930 301 ntBASIC2.72□□□□□ -1.97
PDLIM1O00151 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC2.72□□□□□ -1.97
PDLIM1O00151 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC2.72□□□□□ -1.97
PDLIM1O00151 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.72□□□□□ -1.97
PDLIM1O00151 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC2.72□□□□□ -1.97
PDLIM1O00151 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.72□□□□□ -1.97
PDLIM1O00151 AC007115.1-201ENST00000546853 234 ntBASIC2.72□□□□□ -1.97
PDLIM1O00151 AL133153.1-201ENST00000557756 303 ntBASIC2.72□□□□□ -1.97
PDLIM1O00151 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.72□□□□□ -1.97
PDLIM1O00151 PCMTD1P2-201ENST00000565017 355 ntBASIC2.72□□□□□ -1.97
PDLIM1O00151 AC090616.2-202ENST00000584248 222 ntBASIC2.72□□□□□ -1.97
PDLIM1O00151 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC2.72□□□□□ -1.97
PDLIM1O00151 NIFKP6-201ENST00000598115 845 ntBASIC2.72□□□□□ -1.97
PDLIM1O00151 AC013553.2-201ENST00000604244 589 ntBASIC2.72□□□□□ -1.97
PDLIM1O00151 CLPTM1LP1-201ENST00000604519 484 ntBASIC2.72□□□□□ -1.97
PDLIM1O00151 OR10AB1P-201ENST00000609613 938 ntBASIC2.72□□□□□ -1.97
PDLIM1O00151 AC090115.4-201ENST00000609970 188 ntBASIC2.72□□□□□ -1.97
PDLIM1O00151 AC013476.2-201ENST00000614456 459 ntBASIC2.72□□□□□ -1.97
PDLIM1O00151 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC2.72□□□□□ -1.97
PDLIM1O00151 AC012150.2-201ENST00000621300 544 ntBASIC2.72□□□□□ -1.97
PDLIM1O00151 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.72□□□□□ -1.97
PDLIM1O00151 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.72□□□□□ -1.97
PDLIM1O00151 AC007336.1-201ENST00000576365 3828 ntBASIC2.71□□□□□ -1.98
PDLIM1O00151 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
PDLIM1O00151 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
PDLIM1O00151 RNY4P24-201ENST00000362735 96 ntBASIC2.71□□□□□ -1.98
PDLIM1O00151 RNU5F-7P-201ENST00000363696 115 ntBASIC2.71□□□□□ -1.98
PDLIM1O00151 Y_RNA.560-201ENST00000384689 102 ntBASIC2.71□□□□□ -1.98
PDLIM1O00151 MIR19A-201ENST00000384878 82 ntBASIC2.71□□□□□ -1.98
PDLIM1O00151 RN7SKP140-201ENST00000411196 284 ntBASIC2.71□□□□□ -1.98
PDLIM1O00151 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC2.71□□□□□ -1.98
PDLIM1O00151 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.71□□□□□ -1.98
PDLIM1O00151 TAAR7P-201ENST00000436141 242 ntBASIC2.71□□□□□ -1.98
PDLIM1O00151 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.71□□□□□ -1.98
PDLIM1O00151 AL671855.1-201ENST00000446875 1203 ntBASIC2.71□□□□□ -1.98
PDLIM1O00151 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC2.71□□□□□ -1.98
PDLIM1O00151 AC010099.1-201ENST00000455434 375 ntBASIC2.71□□□□□ -1.98
PDLIM1O00151 RNU7-59P-201ENST00000459101 61 ntBASIC2.71□□□□□ -1.98
PDLIM1O00151 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.71□□□□□ -1.98
PDLIM1O00151 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC2.71□□□□□ -1.98
PDLIM1O00151 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.71□□□□□ -1.98
PDLIM1O00151 MTND4LP18-201ENST00000526864 291 ntBASIC2.71□□□□□ -1.98
PDLIM1O00151 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC2.71□□□□□ -1.98
PDLIM1O00151 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.71□□□□□ -1.98
PDLIM1O00151 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC2.71□□□□□ -1.98
PDLIM1O00151 U73023.1-201ENST00000603134 700 ntBASIC2.71□□□□□ -1.98
PDLIM1O00151 SDR42E1P2-201ENST00000614861 481 ntBASIC2.71□□□□□ -1.98
PDLIM1O00151 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.71□□□□□ -1.98
PDLIM1O00151 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC2.71□□□□□ -1.98
PDLIM1O00151 AC006927.3-201ENST00000638789 384 ntBASIC2.71□□□□□ -1.98
PDLIM1O00151 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
PDLIM1O00151 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
PDLIM1O00151 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
PDLIM1O00151 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
PDLIM1O00151 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.7□□□□□ -1.98
PDLIM1O00151 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
PDLIM1O00151 ZNF658B-202ENST00000615961 3375 ntBASIC2.7□□□□□ -1.98
PDLIM1O00151 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
PDLIM1O00151 RNU6-500P-201ENST00000362349 107 ntBASIC2.7□□□□□ -1.98
PDLIM1O00151 RNU6-501P-201ENST00000364072 100 ntBASIC2.7□□□□□ -1.98
PDLIM1O00151 SNORA67.1-201ENST00000364749 141 ntBASIC2.7□□□□□ -1.98
PDLIM1O00151 ERMN-204ENST00000409925 556 ntTSL 4 BASIC2.7□□□□□ -1.98
PDLIM1O00151 RPL21P24-201ENST00000413752 448 ntBASIC2.7□□□□□ -1.98
PDLIM1O00151 SPA17P1-201ENST00000416656 452 ntBASIC2.7□□□□□ -1.98
PDLIM1O00151 AL645937.1-202ENST00000421799 937 ntBASIC2.7□□□□□ -1.98
PDLIM1O00151 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC2.7□□□□□ -1.98
PDLIM1O00151 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 130.7 ms