Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 RSU1P2-202ENST00000437884 485 ntBASIC2.42□□□□□ -2.02
TMX2-CTNND1H3BSU7 AL445567.1-201ENST00000439121 144 ntBASIC2.42□□□□□ -2.02
TMX2-CTNND1H3BSU7 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.42□□□□□ -2.02
TMX2-CTNND1H3BSU7 UBBP3-201ENST00000445497 241 ntBASIC2.42□□□□□ -2.02
TMX2-CTNND1H3BSU7 Z82190.1-201ENST00000454534 490 ntBASIC2.42□□□□□ -2.02
TMX2-CTNND1H3BSU7 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC2.42□□□□□ -2.02
TMX2-CTNND1H3BSU7 MEMO1P3-201ENST00000459811 302 ntBASIC2.42□□□□□ -2.02
TMX2-CTNND1H3BSU7 AC126182.1-201ENST00000478134 357 ntBASIC2.42□□□□□ -2.02
TMX2-CTNND1H3BSU7 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
TMX2-CTNND1H3BSU7 AC023424.2-201ENST00000493479 777 ntBASIC2.42□□□□□ -2.02
TMX2-CTNND1H3BSU7 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC2.42□□□□□ -2.02
TMX2-CTNND1H3BSU7 AC093281.2-201ENST00000510153 597 ntBASIC2.42□□□□□ -2.02
TMX2-CTNND1H3BSU7 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC2.42□□□□□ -2.02
TMX2-CTNND1H3BSU7 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC2.42□□□□□ -2.02
TMX2-CTNND1H3BSU7 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.42□□□□□ -2.02
TMX2-CTNND1H3BSU7 AP000873.5-201ENST00000533906 236 ntBASIC2.42□□□□□ -2.02
TMX2-CTNND1H3BSU7 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC2.42□□□□□ -2.02
TMX2-CTNND1H3BSU7 AC027176.1-201ENST00000560204 514 ntBASIC2.42□□□□□ -2.02
TMX2-CTNND1H3BSU7 ISCA1P3-201ENST00000577104 373 ntBASIC2.42□□□□□ -2.02
TMX2-CTNND1H3BSU7 MIR5092-201ENST00000583139 88 ntBASIC2.42□□□□□ -2.02
TMX2-CTNND1H3BSU7 AL353997.4-201ENST00000586196 166 ntBASIC2.42□□□□□ -2.02
TMX2-CTNND1H3BSU7 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC2.42□□□□□ -2.02
TMX2-CTNND1H3BSU7 BCRP9-201ENST00000605312 388 ntBASIC2.42□□□□□ -2.02
TMX2-CTNND1H3BSU7 AC097520.1-201ENST00000624435 385 ntBASIC2.42□□□□□ -2.02
TMX2-CTNND1H3BSU7 AC103706.2-201ENST00000638080 240 ntBASIC2.42□□□□□ -2.02
TMX2-CTNND1H3BSU7 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC2.41□□□□□ -2.02
TMX2-CTNND1H3BSU7 AC080100.1-201ENST00000624239 5356 ntBASIC2.41□□□□□ -2.02
TMX2-CTNND1H3BSU7 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
TMX2-CTNND1H3BSU7 RNU6-500P-201ENST00000362349 107 ntBASIC2.41□□□□□ -2.02
TMX2-CTNND1H3BSU7 RNU6-1155P-201ENST00000363554 107 ntBASIC2.41□□□□□ -2.02
TMX2-CTNND1H3BSU7 RNU6-289P-201ENST00000364093 107 ntBASIC2.41□□□□□ -2.02
TMX2-CTNND1H3BSU7 U8.8-201ENST00000365399 135 ntBASIC2.41□□□□□ -2.02
TMX2-CTNND1H3BSU7 CD24P4-201ENST00000382840 243 ntBASIC2.41□□□□□ -2.02
TMX2-CTNND1H3BSU7 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
TMX2-CTNND1H3BSU7 TAS2R15P-201ENST00000390674 928 ntBASIC2.41□□□□□ -2.02
TMX2-CTNND1H3BSU7 AL590084.2-201ENST00000401481 382 ntBASIC2.41□□□□□ -2.02
TMX2-CTNND1H3BSU7 AL359511.1-201ENST00000402970 211 ntBASIC2.41□□□□□ -2.02
TMX2-CTNND1H3BSU7 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC2.41□□□□□ -2.02
TMX2-CTNND1H3BSU7 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC2.41□□□□□ -2.02
TMX2-CTNND1H3BSU7 AC019178.2-201ENST00000423595 505 ntBASIC2.41□□□□□ -2.02
TMX2-CTNND1H3BSU7 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC2.41□□□□□ -2.02
TMX2-CTNND1H3BSU7 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC2.41□□□□□ -2.02
TMX2-CTNND1H3BSU7 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC2.41□□□□□ -2.02
TMX2-CTNND1H3BSU7 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.41□□□□□ -2.02
TMX2-CTNND1H3BSU7 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC2.41□□□□□ -2.02
TMX2-CTNND1H3BSU7 AL353705.4-201ENST00000449661 238 ntBASIC2.41□□□□□ -2.02
TMX2-CTNND1H3BSU7 ART2BP-201ENST00000453501 499 ntBASIC2.41□□□□□ -2.02
TMX2-CTNND1H3BSU7 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.41□□□□□ -2.02
TMX2-CTNND1H3BSU7 RPS29P12-201ENST00000460178 152 ntBASIC2.41□□□□□ -2.02
TMX2-CTNND1H3BSU7 RPL30P9-201ENST00000465586 330 ntBASIC2.41□□□□□ -2.02
TMX2-CTNND1H3BSU7 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC2.41□□□□□ -2.02
TMX2-CTNND1H3BSU7 RPL23AP45-201ENST00000476406 468 ntBASIC2.41□□□□□ -2.02
TMX2-CTNND1H3BSU7 RN7SL636P-201ENST00000497504 294 ntBASIC2.41□□□□□ -2.02
TMX2-CTNND1H3BSU7 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.41□□□□□ -2.02
TMX2-CTNND1H3BSU7 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC2.41□□□□□ -2.02
TMX2-CTNND1H3BSU7 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
TMX2-CTNND1H3BSU7 MRPS33P3-201ENST00000513456 322 ntBASIC2.41□□□□□ -2.02
TMX2-CTNND1H3BSU7 RPPH1-2P-201ENST00000516688 293 ntBASIC2.41□□□□□ -2.02
TMX2-CTNND1H3BSU7 AC087373.1-201ENST00000524920 491 ntBASIC2.41□□□□□ -2.02
TMX2-CTNND1H3BSU7 AP003497.1-201ENST00000528472 562 ntBASIC2.41□□□□□ -2.02
TMX2-CTNND1H3BSU7 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC2.41□□□□□ -2.02
TMX2-CTNND1H3BSU7 AC018630.1-201ENST00000541376 925 ntBASIC2.41□□□□□ -2.02
TMX2-CTNND1H3BSU7 ELOCP32-201ENST00000548625 324 ntBASIC2.41□□□□□ -2.02
TMX2-CTNND1H3BSU7 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC2.41□□□□□ -2.02
TMX2-CTNND1H3BSU7 RPL23AP84-201ENST00000571193 464 ntBASIC2.41□□□□□ -2.02
TMX2-CTNND1H3BSU7 AC060766.3-201ENST00000591442 263 ntBASIC2.41□□□□□ -2.02
TMX2-CTNND1H3BSU7 AC010738.1-201ENST00000604970 987 ntBASIC2.41□□□□□ -2.02
TMX2-CTNND1H3BSU7 AC128687.1-201ENST00000605304 619 ntBASIC2.41□□□□□ -2.02
TMX2-CTNND1H3BSU7 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.41□□□□□ -2.02
TMX2-CTNND1H3BSU7 AC072039.2-201ENST00000608883 439 ntBASIC2.41□□□□□ -2.02
TMX2-CTNND1H3BSU7 AL110115.1-201ENST00000614396 364 ntBASIC2.41□□□□□ -2.02
TMX2-CTNND1H3BSU7 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC2.41□□□□□ -2.02
TMX2-CTNND1H3BSU7 AL356585.4-201ENST00000623078 1229 ntBASIC2.41□□□□□ -2.02
TMX2-CTNND1H3BSU7 AC007671.2-201ENST00000637344 619 ntBASIC2.41□□□□□ -2.02
TMX2-CTNND1H3BSU7 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
TMX2-CTNND1H3BSU7 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC2.41□□□□□ -2.02
TMX2-CTNND1H3BSU7 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
TMX2-CTNND1H3BSU7 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
TMX2-CTNND1H3BSU7 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
TMX2-CTNND1H3BSU7 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.4□□□□□ -2.02
TMX2-CTNND1H3BSU7 RPL21P132-201ENST00000331267 462 ntBASIC2.4□□□□□ -2.03
TMX2-CTNND1H3BSU7 Y_RNA.234-201ENST00000364409 97 ntBASIC2.4□□□□□ -2.03
TMX2-CTNND1H3BSU7 RNU1-73P-201ENST00000383971 164 ntBASIC2.4□□□□□ -2.03
TMX2-CTNND1H3BSU7 RNU1-138P-201ENST00000384093 164 ntBASIC2.4□□□□□ -2.03
TMX2-CTNND1H3BSU7 MIR135A2-201ENST00000384854 100 ntBASIC2.4□□□□□ -2.03
TMX2-CTNND1H3BSU7 AL356131.1-201ENST00000405826 414 ntBASIC2.4□□□□□ -2.03
TMX2-CTNND1H3BSU7 TEX41-202ENST00000414256 604 ntTSL 5 BASIC2.4□□□□□ -2.03
TMX2-CTNND1H3BSU7 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC2.4□□□□□ -2.03
TMX2-CTNND1H3BSU7 MTATP6P27-201ENST00000416987 621 ntBASIC2.4□□□□□ -2.03
TMX2-CTNND1H3BSU7 AC009963.1-201ENST00000417265 157 ntBASIC2.4□□□□□ -2.03
TMX2-CTNND1H3BSU7 Z98742.3-201ENST00000418637 326 ntBASIC2.4□□□□□ -2.03
TMX2-CTNND1H3BSU7 AC099677.1-201ENST00000420575 175 ntBASIC2.4□□□□□ -2.03
TMX2-CTNND1H3BSU7 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC2.4□□□□□ -2.03
TMX2-CTNND1H3BSU7 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.4□□□□□ -2.03
TMX2-CTNND1H3BSU7 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
TMX2-CTNND1H3BSU7 TOMM20P4-201ENST00000427861 435 ntBASIC2.4□□□□□ -2.03
TMX2-CTNND1H3BSU7 MTATP6P17-201ENST00000431030 672 ntBASIC2.4□□□□□ -2.03
TMX2-CTNND1H3BSU7 SDCBPP1-201ENST00000440192 890 ntBASIC2.4□□□□□ -2.03
TMX2-CTNND1H3BSU7 HIGD1AP2-201ENST00000446367 280 ntBASIC2.4□□□□□ -2.03
TMX2-CTNND1H3BSU7 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 130.4 ms