Protein–RNA interactions for Protein: A6NKQ9

CGB1, Choriogonadotropin subunit beta variant 1, humanhuman

Predictions only

Length 187 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB1A6NKQ9 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC3.54□□□□□ -1.84
CGB1A6NKQ9 RPL7P28-201ENST00000437739 740 ntBASIC3.54□□□□□ -1.84
CGB1A6NKQ9 AC005094.1-201ENST00000440420 368 ntBASIC3.54□□□□□ -1.84
CGB1A6NKQ9 RPL21P23-201ENST00000446654 460 ntBASIC3.54□□□□□ -1.84
CGB1A6NKQ9 RPL12P25-201ENST00000455592 494 ntBASIC3.54□□□□□ -1.84
CGB1A6NKQ9 SCARNA18-201ENST00000459004 134 ntBASIC3.54□□□□□ -1.84
CGB1A6NKQ9 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
CGB1A6NKQ9 RPS27AP1-201ENST00000475545 471 ntBASIC3.54□□□□□ -1.84
CGB1A6NKQ9 RN7SL826P-201ENST00000479724 288 ntBASIC3.54□□□□□ -1.84
CGB1A6NKQ9 RPL21P93-201ENST00000480465 489 ntBASIC3.54□□□□□ -1.84
CGB1A6NKQ9 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC3.54□□□□□ -1.84
CGB1A6NKQ9 RPL23AP55-201ENST00000498163 452 ntBASIC3.54□□□□□ -1.84
CGB1A6NKQ9 MLLT10P2-201ENST00000506434 249 ntBASIC3.54□□□□□ -1.84
CGB1A6NKQ9 RNU6-1213P-201ENST00000517075 94 ntBASIC3.54□□□□□ -1.84
CGB1A6NKQ9 IGKV2D-19-201ENST00000523346 262 ntBASIC3.54□□□□□ -1.84
CGB1A6NKQ9 AP001781.1-201ENST00000530977 207 ntBASIC3.54□□□□□ -1.84
CGB1A6NKQ9 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC3.54□□□□□ -1.84
CGB1A6NKQ9 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.54□□□□□ -1.84
CGB1A6NKQ9 AC106782.4-201ENST00000568264 210 ntBASIC3.54□□□□□ -1.84
CGB1A6NKQ9 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.54□□□□□ -1.84
CGB1A6NKQ9 MIR4293-201ENST00000584305 78 ntBASIC3.54□□□□□ -1.84
CGB1A6NKQ9 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.54□□□□□ -1.84
CGB1A6NKQ9 AC211433.2-201ENST00000608433 387 ntBASIC3.54□□□□□ -1.84
CGB1A6NKQ9 AC020634.1-201ENST00000608701 549 ntBASIC3.54□□□□□ -1.84
CGB1A6NKQ9 AL355810.1-201ENST00000614629 552 ntBASIC3.54□□□□□ -1.84
CGB1A6NKQ9 AL355365.1-201ENST00000616480 294 ntBASIC3.54□□□□□ -1.84
CGB1A6NKQ9 AC007485.1-201ENST00000616755 206 ntBASIC3.54□□□□□ -1.84
CGB1A6NKQ9 PISRT1.1-201ENST00000616930 107 ntBASIC3.54□□□□□ -1.84
CGB1A6NKQ9 MIR7154-201ENST00000620673 73 ntBASIC3.54□□□□□ -1.84
CGB1A6NKQ9 AC007546.2-201ENST00000623996 360 ntBASIC3.54□□□□□ -1.84
CGB1A6NKQ9 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
CGB1A6NKQ9 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CGB1A6NKQ9 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CGB1A6NKQ9 NRK-204ENST00000540278 1687 ntTSL 2 BASIC3.54□□□□□ -1.84
CGB1A6NKQ9 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CGB1A6NKQ9 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CGB1A6NKQ9 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
CGB1A6NKQ9 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
CGB1A6NKQ9 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CGB1A6NKQ9 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CGB1A6NKQ9 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CGB1A6NKQ9 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC3.54□□□□□ -1.84
CGB1A6NKQ9 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC3.53□□□□□ -1.84
CGB1A6NKQ9 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC3.53□□□□□ -1.84
CGB1A6NKQ9 RNU6-562P-201ENST00000362731 107 ntBASIC3.53□□□□□ -1.84
CGB1A6NKQ9 Y_RNA.80-201ENST00000362996 102 ntBASIC3.53□□□□□ -1.84
CGB1A6NKQ9 SNORA70F-201ENST00000384142 135 ntBASIC3.53□□□□□ -1.84
CGB1A6NKQ9 Y_RNA.463-201ENST00000384271 102 ntBASIC3.53□□□□□ -1.84
CGB1A6NKQ9 RNU6-784P-201ENST00000384330 106 ntBASIC3.53□□□□□ -1.84
CGB1A6NKQ9 Y_RNA.527-201ENST00000384573 102 ntBASIC3.53□□□□□ -1.84
CGB1A6NKQ9 RNA5SP219-201ENST00000390940 113 ntBASIC3.53□□□□□ -1.84
CGB1A6NKQ9 RNU4-25P-201ENST00000410569 230 ntBASIC3.53□□□□□ -1.84
CGB1A6NKQ9 RNU6-516P-201ENST00000411381 104 ntBASIC3.53□□□□□ -1.84
CGB1A6NKQ9 AC096644.2-201ENST00000429278 159 ntBASIC3.53□□□□□ -1.84
CGB1A6NKQ9 HMGB1P12-201ENST00000438594 598 ntBASIC3.53□□□□□ -1.84
CGB1A6NKQ9 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC3.53□□□□□ -1.84
CGB1A6NKQ9 AC116533.1-201ENST00000459748 321 ntBASIC3.53□□□□□ -1.84
CGB1A6NKQ9 AC010326.1-201ENST00000462726 602 ntBASIC3.53□□□□□ -1.84
CGB1A6NKQ9 AC128713.1-201ENST00000471495 306 ntBASIC3.53□□□□□ -1.84
CGB1A6NKQ9 AC020593.1-201ENST00000507399 299 ntBASIC3.53□□□□□ -1.84
CGB1A6NKQ9 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC3.53□□□□□ -1.84
CGB1A6NKQ9 AC108078.2-201ENST00000510750 236 ntBASIC3.53□□□□□ -1.84
CGB1A6NKQ9 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC3.53□□□□□ -1.84
CGB1A6NKQ9 RNA5SP73-201ENST00000516744 108 ntBASIC3.53□□□□□ -1.84
CGB1A6NKQ9 IGKV1-32-201ENST00000519290 311 ntBASIC3.53□□□□□ -1.84
CGB1A6NKQ9 HMGN1P28-201ENST00000521340 364 ntBASIC3.53□□□□□ -1.84
CGB1A6NKQ9 RANP3-201ENST00000530970 276 ntBASIC3.53□□□□□ -1.84
CGB1A6NKQ9 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC3.53□□□□□ -1.84
CGB1A6NKQ9 MYL12BP1-201ENST00000569826 507 ntBASIC3.53□□□□□ -1.84
CGB1A6NKQ9 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.53□□□□□ -1.84
CGB1A6NKQ9 BNIP3P16-201ENST00000589779 534 ntBASIC3.53□□□□□ -1.84
CGB1A6NKQ9 AC073539.2-201ENST00000597113 165 ntBASIC3.53□□□□□ -1.84
CGB1A6NKQ9 PRR13P7-201ENST00000605538 430 ntBASIC3.53□□□□□ -1.84
CGB1A6NKQ9 AC011890.2-201ENST00000613393 294 ntBASIC3.53□□□□□ -1.84
CGB1A6NKQ9 ATP5A1P2-202ENST00000616464 443 ntBASIC3.53□□□□□ -1.84
CGB1A6NKQ9 MIR6130-201ENST00000619419 109 ntBASIC3.53□□□□□ -1.84
CGB1A6NKQ9 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC3.53□□□□□ -1.84
CGB1A6NKQ9 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
CGB1A6NKQ9 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC3.53□□□□□ -1.84
CGB1A6NKQ9 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
CGB1A6NKQ9 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
CGB1A6NKQ9 MTND5P30-201ENST00000452896 1731 ntBASIC3.53□□□□□ -1.85
CGB1A6NKQ9 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.52□□□□□ -1.85
CGB1A6NKQ9 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC3.52□□□□□ -1.85
CGB1A6NKQ9 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.52□□□□□ -1.85
CGB1A6NKQ9 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC3.52□□□□□ -1.85
CGB1A6NKQ9 Z82217.1-201ENST00000625157 8149 ntBASIC3.52□□□□□ -1.85
CGB1A6NKQ9 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
CGB1A6NKQ9 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CGB1A6NKQ9 SNORD113.2-201ENST00000364166 89 ntBASIC3.52□□□□□ -1.85
CGB1A6NKQ9 RNU6-173P-201ENST00000364215 104 ntBASIC3.52□□□□□ -1.85
CGB1A6NKQ9 RNU6-890P-201ENST00000384121 107 ntBASIC3.52□□□□□ -1.85
CGB1A6NKQ9 RNU6-1127P-201ENST00000384580 107 ntBASIC3.52□□□□□ -1.85
CGB1A6NKQ9 RNU6-1222P-201ENST00000384615 107 ntBASIC3.52□□□□□ -1.85
CGB1A6NKQ9 MIR550A3-201ENST00000390735 95 ntBASIC3.52□□□□□ -1.85
CGB1A6NKQ9 RNU11-4P-201ENST00000391149 133 ntBASIC3.52□□□□□ -1.85
CGB1A6NKQ9 MIR298-201ENST00000401212 88 ntBASIC3.52□□□□□ -1.85
CGB1A6NKQ9 AL109755.1-201ENST00000401791 649 ntBASIC3.52□□□□□ -1.85
CGB1A6NKQ9 RNU4-6P-201ENST00000410804 122 ntBASIC3.52□□□□□ -1.85
CGB1A6NKQ9 RN7SKP216-201ENST00000411050 312 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms