Protein–RNA interactions for Protein: Q9Y6N9

USH1C, Harmonin, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1CQ9Y6N9 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.1□□□□□ -2.07
USH1CQ9Y6N9 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC2.1□□□□□ -2.07
USH1CQ9Y6N9 Z80107.1-201ENST00000436830 412 ntBASIC2.1□□□□□ -2.07
USH1CQ9Y6N9 Z82210.1-201ENST00000440037 231 ntBASIC2.1□□□□□ -2.07
USH1CQ9Y6N9 SDCBPP1-201ENST00000440192 890 ntBASIC2.1□□□□□ -2.07
USH1CQ9Y6N9 BTBD7P2-201ENST00000441962 620 ntBASIC2.1□□□□□ -2.07
USH1CQ9Y6N9 AL096829.2-201ENST00000446582 742 ntBASIC2.1□□□□□ -2.07
USH1CQ9Y6N9 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
USH1CQ9Y6N9 AL118520.1-201ENST00000450770 291 ntBASIC2.1□□□□□ -2.07
USH1CQ9Y6N9 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.1□□□□□ -2.07
USH1CQ9Y6N9 AC107626.1-201ENST00000471084 183 ntBASIC2.1□□□□□ -2.07
USH1CQ9Y6N9 RPS27P21-201ENST00000486977 252 ntBASIC2.1□□□□□ -2.07
USH1CQ9Y6N9 AC114786.4-201ENST00000508771 728 ntBASIC2.1□□□□□ -2.07
USH1CQ9Y6N9 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.1□□□□□ -2.07
USH1CQ9Y6N9 AC114797.1-201ENST00000514003 728 ntBASIC2.1□□□□□ -2.07
USH1CQ9Y6N9 RNA5SP200-201ENST00000516360 103 ntBASIC2.1□□□□□ -2.07
USH1CQ9Y6N9 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.1□□□□□ -2.07
USH1CQ9Y6N9 AC022634.1-201ENST00000520765 532 ntBASIC2.1□□□□□ -2.07
USH1CQ9Y6N9 OR8K2P-201ENST00000524645 927 ntBASIC2.1□□□□□ -2.07
USH1CQ9Y6N9 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.1□□□□□ -2.07
USH1CQ9Y6N9 CYB5AP5-201ENST00000549779 389 ntBASIC2.1□□□□□ -2.07
USH1CQ9Y6N9 AL132857.1-201ENST00000555180 708 ntBASIC2.1□□□□□ -2.07
USH1CQ9Y6N9 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC2.1□□□□□ -2.07
USH1CQ9Y6N9 AC234778.2-201ENST00000566241 354 ntBASIC2.1□□□□□ -2.07
USH1CQ9Y6N9 RPS3AP23-202ENST00000574601 686 ntBASIC2.1□□□□□ -2.07
USH1CQ9Y6N9 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC2.1□□□□□ -2.07
USH1CQ9Y6N9 AL118556.2-201ENST00000614375 824 ntBASIC2.1□□□□□ -2.07
USH1CQ9Y6N9 AC010975.3-201ENST00000618727 978 ntBASIC2.1□□□□□ -2.07
USH1CQ9Y6N9 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.1□□□□□ -2.07
USH1CQ9Y6N9 AL157770.1-201ENST00000623049 439 ntBASIC2.1□□□□□ -2.07
USH1CQ9Y6N9 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.1□□□□□ -2.07
USH1CQ9Y6N9 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.1□□□□□ -2.07
USH1CQ9Y6N9 CENPCP1-201ENST00000533085 2578 ntBASIC2.1□□□□□ -2.07
USH1CQ9Y6N9 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
USH1CQ9Y6N9 MTND4P35-201ENST00000604257 1375 ntBASIC2.1□□□□□ -2.07
USH1CQ9Y6N9 RN7SKP226-201ENST00000364912 300 ntBASIC2.09□□□□□ -2.07
USH1CQ9Y6N9 DHFRP6-201ENST00000401776 268 ntBASIC2.09□□□□□ -2.07
USH1CQ9Y6N9 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.09□□□□□ -2.07
USH1CQ9Y6N9 AL356379.1-201ENST00000414105 126 ntBASIC2.09□□□□□ -2.07
USH1CQ9Y6N9 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC2.09□□□□□ -2.07
USH1CQ9Y6N9 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.09□□□□□ -2.07
USH1CQ9Y6N9 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.09□□□□□ -2.07
USH1CQ9Y6N9 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.09□□□□□ -2.07
USH1CQ9Y6N9 PIGFP3-201ENST00000441918 722 ntBASIC2.09□□□□□ -2.07
USH1CQ9Y6N9 RPL7P36-201ENST00000444633 681 ntBASIC2.09□□□□□ -2.07
USH1CQ9Y6N9 AC105252.1-201ENST00000503089 286 ntBASIC2.09□□□□□ -2.07
USH1CQ9Y6N9 AC093677.1-201ENST00000514414 678 ntBASIC2.09□□□□□ -2.07
USH1CQ9Y6N9 SCARNA17.1-201ENST00000516211 143 ntBASIC2.09□□□□□ -2.07
USH1CQ9Y6N9 SCARNA17.2-201ENST00000516334 143 ntBASIC2.09□□□□□ -2.07
USH1CQ9Y6N9 HSPA8P13-201ENST00000523715 472 ntBASIC2.09□□□□□ -2.07
USH1CQ9Y6N9 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.09□□□□□ -2.07
USH1CQ9Y6N9 AC090615.1-201ENST00000577519 154 ntBASIC2.09□□□□□ -2.07
USH1CQ9Y6N9 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.09□□□□□ -2.07
USH1CQ9Y6N9 AC011451.2-201ENST00000604303 598 ntBASIC2.09□□□□□ -2.07
USH1CQ9Y6N9 AC116312.1-201ENST00000606841 314 ntBASIC2.09□□□□□ -2.07
USH1CQ9Y6N9 AL158211.4-201ENST00000606988 584 ntBASIC2.09□□□□□ -2.07
USH1CQ9Y6N9 AC005332.10-201ENST00000612725 619 ntBASIC2.09□□□□□ -2.07
USH1CQ9Y6N9 SCARNA17.4-201ENST00000614296 143 ntBASIC2.09□□□□□ -2.07
USH1CQ9Y6N9 MIR6132-201ENST00000622083 109 ntBASIC2.09□□□□□ -2.07
USH1CQ9Y6N9 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.09□□□□□ -2.08
USH1CQ9Y6N9 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.08□□□□□ -2.08
USH1CQ9Y6N9 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
USH1CQ9Y6N9 RNU6-216P-201ENST00000363282 104 ntBASIC2.08□□□□□ -2.08
USH1CQ9Y6N9 U3.12-201ENST00000364498 214 ntBASIC2.08□□□□□ -2.08
USH1CQ9Y6N9 RNU6-707P-201ENST00000364647 95 ntBASIC2.08□□□□□ -2.08
USH1CQ9Y6N9 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
USH1CQ9Y6N9 RNU6-741P-201ENST00000383889 107 ntBASIC2.08□□□□□ -2.08
USH1CQ9Y6N9 RNU6-217P-201ENST00000384164 104 ntBASIC2.08□□□□□ -2.08
USH1CQ9Y6N9 SNORD65.1-201ENST00000390889 71 ntBASIC2.08□□□□□ -2.08
USH1CQ9Y6N9 SUMO2P12-201ENST00000405924 140 ntBASIC2.08□□□□□ -2.08
USH1CQ9Y6N9 RN7SKP284-201ENST00000411002 343 ntBASIC2.08□□□□□ -2.08
USH1CQ9Y6N9 RPL17P12-201ENST00000413391 526 ntBASIC2.08□□□□□ -2.08
USH1CQ9Y6N9 AC009963.1-201ENST00000417265 157 ntBASIC2.08□□□□□ -2.08
USH1CQ9Y6N9 SEPT2P1-201ENST00000419651 180 ntBASIC2.08□□□□□ -2.08
USH1CQ9Y6N9 AL139421.1-201ENST00000423010 169 ntBASIC2.08□□□□□ -2.08
USH1CQ9Y6N9 AC007919.1-201ENST00000429380 217 ntBASIC2.08□□□□□ -2.08
USH1CQ9Y6N9 CBWD4P-201ENST00000445695 655 ntBASIC2.08□□□□□ -2.08
USH1CQ9Y6N9 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.08□□□□□ -2.08
USH1CQ9Y6N9 TRGVB-201ENST00000453257 471 ntBASIC2.08□□□□□ -2.08
USH1CQ9Y6N9 AC244505.3-201ENST00000454598 187 ntBASIC2.08□□□□□ -2.08
USH1CQ9Y6N9 MRPS17P3-201ENST00000465453 385 ntBASIC2.08□□□□□ -2.08
USH1CQ9Y6N9 MIR514B-201ENST00000516774 80 ntBASIC2.08□□□□□ -2.08
USH1CQ9Y6N9 BTF3P12-201ENST00000519620 469 ntBASIC2.08□□□□□ -2.08
USH1CQ9Y6N9 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC2.08□□□□□ -2.08
USH1CQ9Y6N9 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.08□□□□□ -2.08
USH1CQ9Y6N9 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC2.08□□□□□ -2.08
USH1CQ9Y6N9 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC2.08□□□□□ -2.08
USH1CQ9Y6N9 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.08□□□□□ -2.08
USH1CQ9Y6N9 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.08□□□□□ -2.08
USH1CQ9Y6N9 SNRPGP1-201ENST00000553864 222 ntBASIC2.08□□□□□ -2.08
USH1CQ9Y6N9 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.08□□□□□ -2.08
USH1CQ9Y6N9 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.08□□□□□ -2.08
USH1CQ9Y6N9 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.08□□□□□ -2.08
USH1CQ9Y6N9 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.08□□□□□ -2.08
USH1CQ9Y6N9 AL445435.1-201ENST00000604232 665 ntBASIC2.08□□□□□ -2.08
USH1CQ9Y6N9 AC135507.1-201ENST00000607214 561 ntBASIC2.08□□□□□ -2.08
USH1CQ9Y6N9 AC008498.1-201ENST00000613012 531 ntBASIC2.08□□□□□ -2.08
USH1CQ9Y6N9 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC2.08□□□□□ -2.08
USH1CQ9Y6N9 AC093875.1-201ENST00000623688 504 ntBASIC2.08□□□□□ -2.08
USH1CQ9Y6N9 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms