Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 AL161729.4-201ENST00000604650 476 ntBASIC3.27□□□□□ -1.89
YIPF1Q9Y548 AP000860.1-201ENST00000605250 559 ntBASIC3.27□□□□□ -1.89
YIPF1Q9Y548 NDUFA8P1-201ENST00000605525 367 ntBASIC3.27□□□□□ -1.89
YIPF1Q9Y548 AC109347.2-201ENST00000610220 349 ntBASIC3.27□□□□□ -1.89
YIPF1Q9Y548 AC004696.1-201ENST00000614345 607 ntBASIC3.27□□□□□ -1.89
YIPF1Q9Y548 uc_338.12-201ENST00000616344 181 ntBASIC3.27□□□□□ -1.89
YIPF1Q9Y548 AC095031.1-201ENST00000623685 672 ntBASIC3.27□□□□□ -1.89
YIPF1Q9Y548 AC007496.3-201ENST00000624987 3443 ntBASIC3.27□□□□□ -1.89
YIPF1Q9Y548 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
YIPF1Q9Y548 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
YIPF1Q9Y548 AC092447.7-201ENST00000422212 1621 ntBASIC3.26□□□□□ -1.89
YIPF1Q9Y548 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
YIPF1Q9Y548 AC093908.1-201ENST00000623125 8092 ntBASIC3.26□□□□□ -1.89
YIPF1Q9Y548 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
YIPF1Q9Y548 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.26□□□□□ -1.89
YIPF1Q9Y548 SNORA80A-201ENST00000363922 136 ntBASIC3.26□□□□□ -1.89
YIPF1Q9Y548 RNU6-173P-201ENST00000364215 104 ntBASIC3.26□□□□□ -1.89
YIPF1Q9Y548 SNORA71.1-201ENST00000364523 117 ntBASIC3.26□□□□□ -1.89
YIPF1Q9Y548 SNORA23-201ENST00000365128 182 ntBASIC3.26□□□□□ -1.89
YIPF1Q9Y548 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
YIPF1Q9Y548 AP002088.1-201ENST00000382740 395 ntBASIC3.26□□□□□ -1.89
YIPF1Q9Y548 RNU6-1042P-201ENST00000384204 107 ntBASIC3.26□□□□□ -1.89
YIPF1Q9Y548 AL109755.1-201ENST00000401791 649 ntBASIC3.26□□□□□ -1.89
YIPF1Q9Y548 AP000567.1-201ENST00000406413 156 ntBASIC3.26□□□□□ -1.89
YIPF1Q9Y548 RN7SKP220-201ENST00000410611 288 ntBASIC3.26□□□□□ -1.89
YIPF1Q9Y548 RNA5SP107-201ENST00000411358 122 ntBASIC3.26□□□□□ -1.89
YIPF1Q9Y548 ELOCP17-201ENST00000414751 326 ntBASIC3.26□□□□□ -1.89
YIPF1Q9Y548 AC010975.2-201ENST00000427781 588 ntBASIC3.26□□□□□ -1.89
YIPF1Q9Y548 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC3.26□□□□□ -1.89
YIPF1Q9Y548 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
YIPF1Q9Y548 USP9YP15-201ENST00000442391 422 ntBASIC3.26□□□□□ -1.89
YIPF1Q9Y548 AC025750.2-201ENST00000442609 450 ntBASIC3.26□□□□□ -1.89
YIPF1Q9Y548 AL162389.1-201ENST00000449233 177 ntBASIC3.26□□□□□ -1.89
YIPF1Q9Y548 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC3.26□□□□□ -1.89
YIPF1Q9Y548 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC3.26□□□□□ -1.89
YIPF1Q9Y548 RPL21P104-201ENST00000464143 478 ntBASIC3.26□□□□□ -1.89
YIPF1Q9Y548 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.26□□□□□ -1.89
YIPF1Q9Y548 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.26□□□□□ -1.89
YIPF1Q9Y548 AC138853.1-201ENST00000503549 823 ntBASIC3.26□□□□□ -1.89
YIPF1Q9Y548 AC114967.1-201ENST00000504890 259 ntBASIC3.26□□□□□ -1.89
YIPF1Q9Y548 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.26□□□□□ -1.89
YIPF1Q9Y548 ARL2BPP6-201ENST00000512757 439 ntBASIC3.26□□□□□ -1.89
YIPF1Q9Y548 SNORA31.8-201ENST00000516327 108 ntBASIC3.26□□□□□ -1.89
YIPF1Q9Y548 RNA5SP337-201ENST00000517007 109 ntBASIC3.26□□□□□ -1.89
YIPF1Q9Y548 RNU6-430P-201ENST00000517078 107 ntBASIC3.26□□□□□ -1.89
YIPF1Q9Y548 RNU6-64P-201ENST00000517119 105 ntBASIC3.26□□□□□ -1.89
YIPF1Q9Y548 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.26□□□□□ -1.89
YIPF1Q9Y548 AC123904.3-201ENST00000547218 814 ntBASIC3.26□□□□□ -1.89
YIPF1Q9Y548 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.26□□□□□ -1.89
YIPF1Q9Y548 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.26□□□□□ -1.89
YIPF1Q9Y548 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.26□□□□□ -1.89
YIPF1Q9Y548 AL033523.1-201ENST00000605153 153 ntBASIC3.26□□□□□ -1.89
YIPF1Q9Y548 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.26□□□□□ -1.89
YIPF1Q9Y548 AC006023.2-201ENST00000609916 167 ntBASIC3.26□□□□□ -1.89
YIPF1Q9Y548 AC005332.10-201ENST00000612725 619 ntBASIC3.26□□□□□ -1.89
YIPF1Q9Y548 AC015540.1-201ENST00000615828 501 ntBASIC3.26□□□□□ -1.89
YIPF1Q9Y548 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
YIPF1Q9Y548 XIST_intron.1-201ENST00000619444 68 ntBASIC3.26□□□□□ -1.89
YIPF1Q9Y548 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC3.26□□□□□ -1.89
YIPF1Q9Y548 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
YIPF1Q9Y548 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
YIPF1Q9Y548 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
YIPF1Q9Y548 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.26□□□□□ -1.89
YIPF1Q9Y548 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
YIPF1Q9Y548 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.26□□□□□ -1.89
YIPF1Q9Y548 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.26□□□□□ -1.89
YIPF1Q9Y548 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
YIPF1Q9Y548 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
YIPF1Q9Y548 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
YIPF1Q9Y548 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
YIPF1Q9Y548 Y_RNA.41-201ENST00000362646 102 ntBASIC3.25□□□□□ -1.89
YIPF1Q9Y548 RNU6-223P-201ENST00000362830 107 ntBASIC3.25□□□□□ -1.89
YIPF1Q9Y548 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
YIPF1Q9Y548 RNU2-8P-201ENST00000410727 190 ntBASIC3.25□□□□□ -1.89
YIPF1Q9Y548 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC3.25□□□□□ -1.89
YIPF1Q9Y548 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
YIPF1Q9Y548 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC3.25□□□□□ -1.89
YIPF1Q9Y548 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC3.25□□□□□ -1.89
YIPF1Q9Y548 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC3.25□□□□□ -1.89
YIPF1Q9Y548 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.25□□□□□ -1.89
YIPF1Q9Y548 AL358934.1-201ENST00000432346 324 ntBASIC3.25□□□□□ -1.89
YIPF1Q9Y548 ARPC3P1-201ENST00000437218 533 ntBASIC3.25□□□□□ -1.89
YIPF1Q9Y548 SETP5-201ENST00000437270 562 ntBASIC3.25□□□□□ -1.89
YIPF1Q9Y548 AC107083.1-201ENST00000439643 279 ntBASIC3.25□□□□□ -1.89
YIPF1Q9Y548 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
YIPF1Q9Y548 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.25□□□□□ -1.89
YIPF1Q9Y548 RNU7-170P-201ENST00000459303 61 ntBASIC3.25□□□□□ -1.89
YIPF1Q9Y548 VN1R17P-201ENST00000472048 1090 ntBASIC3.25□□□□□ -1.89
YIPF1Q9Y548 AC108860.1-201ENST00000484521 383 ntBASIC3.25□□□□□ -1.89
YIPF1Q9Y548 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
YIPF1Q9Y548 MTND2P33-201ENST00000506452 1031 ntBASIC3.25□□□□□ -1.89
YIPF1Q9Y548 CDC42P4-201ENST00000510507 563 ntBASIC3.25□□□□□ -1.89
YIPF1Q9Y548 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC3.25□□□□□ -1.89
YIPF1Q9Y548 RN7SKP272-201ENST00000516988 232 ntBASIC3.25□□□□□ -1.89
YIPF1Q9Y548 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC3.25□□□□□ -1.89
YIPF1Q9Y548 AC090136.1-201ENST00000520009 240 ntBASIC3.25□□□□□ -1.89
YIPF1Q9Y548 AC245505.1-201ENST00000556398 224 ntBASIC3.25□□□□□ -1.89
YIPF1Q9Y548 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.25□□□□□ -1.89
YIPF1Q9Y548 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.25□□□□□ -1.89
YIPF1Q9Y548 AF038458.1-201ENST00000588406 262 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 140.3 ms