Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 RNU2-58P-201ENST00000516403 183 ntBASIC4.02□□□□□ -1.77
SSX2IPQ9Y2D8 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.02□□□□□ -1.77
SSX2IPQ9Y2D8 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC4.02□□□□□ -1.77
SSX2IPQ9Y2D8 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC4.02□□□□□ -1.77
SSX2IPQ9Y2D8 AC128657.1-201ENST00000549459 145 ntBASIC4.02□□□□□ -1.77
SSX2IPQ9Y2D8 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC4.02□□□□□ -1.77
SSX2IPQ9Y2D8 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC4.02□□□□□ -1.77
SSX2IPQ9Y2D8 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC4.02□□□□□ -1.77
SSX2IPQ9Y2D8 AC055876.1-202ENST00000567053 138 ntBASIC4.02□□□□□ -1.77
SSX2IPQ9Y2D8 AP001429.1-201ENST00000602568 530 ntBASIC4.02□□□□□ -1.77
SSX2IPQ9Y2D8 BNIP3P9-201ENST00000603714 553 ntBASIC4.02□□□□□ -1.77
SSX2IPQ9Y2D8 IGHV3-29-201ENST00000604817 344 ntBASIC4.02□□□□□ -1.77
SSX2IPQ9Y2D8 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC4.02□□□□□ -1.77
SSX2IPQ9Y2D8 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC4.02□□□□□ -1.77
SSX2IPQ9Y2D8 DISC2.1-201ENST00000612827 205 ntBASIC4.02□□□□□ -1.77
SSX2IPQ9Y2D8 AC104985.2-201ENST00000620598 500 ntBASIC4.02□□□□□ -1.77
SSX2IPQ9Y2D8 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC4.02□□□□□ -1.77
SSX2IPQ9Y2D8 AC073544.1-201ENST00000600110 1595 ntBASIC4.02□□□□□ -1.77
SSX2IPQ9Y2D8 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SSX2IPQ9Y2D8 MTCO1P12-201ENST00000414273 1543 ntBASIC4.01□□□□□ -1.77
SSX2IPQ9Y2D8 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SSX2IPQ9Y2D8 AC244517.1-201ENST00000606030 2086 ntBASIC4.01□□□□□ -1.77
SSX2IPQ9Y2D8 AL049781.1-201ENST00000623195 3585 ntBASIC4.01□□□□□ -1.77
SSX2IPQ9Y2D8 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.01□□□□□ -1.77
SSX2IPQ9Y2D8 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SSX2IPQ9Y2D8 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC4.01□□□□□ -1.77
SSX2IPQ9Y2D8 IPO8P1-201ENST00000455509 3109 ntBASIC4.01□□□□□ -1.77
SSX2IPQ9Y2D8 TTN-204ENST00000360870 18218 ntTSL 5 BASIC4.01□□□□□ -1.77
SSX2IPQ9Y2D8 RNU6-525P-201ENST00000363685 104 ntBASIC4.01□□□□□ -1.77
SSX2IPQ9Y2D8 Y_RNA.381-201ENST00000365666 102 ntBASIC4.01□□□□□ -1.77
SSX2IPQ9Y2D8 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
SSX2IPQ9Y2D8 MIR558-201ENST00000384920 94 ntBASIC4.01□□□□□ -1.77
SSX2IPQ9Y2D8 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SSX2IPQ9Y2D8 AL356776.1-201ENST00000406574 447 ntBASIC4.01□□□□□ -1.77
SSX2IPQ9Y2D8 RPL30P2-201ENST00000414021 291 ntBASIC4.01□□□□□ -1.77
SSX2IPQ9Y2D8 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC4.01□□□□□ -1.77
SSX2IPQ9Y2D8 AC007390.1-201ENST00000415722 356 ntBASIC4.01□□□□□ -1.77
SSX2IPQ9Y2D8 AL137014.1-201ENST00000420490 1226 ntBASIC4.01□□□□□ -1.77
SSX2IPQ9Y2D8 MED13P1-201ENST00000428342 171 ntBASIC4.01□□□□□ -1.77
SSX2IPQ9Y2D8 AC098614.3-201ENST00000438957 440 ntBASIC4.01□□□□□ -1.77
SSX2IPQ9Y2D8 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC4.01□□□□□ -1.77
SSX2IPQ9Y2D8 AC016696.1-201ENST00000446949 318 ntBASIC4.01□□□□□ -1.77
SSX2IPQ9Y2D8 AC006480.1-201ENST00000449887 378 ntBASIC4.01□□□□□ -1.77
SSX2IPQ9Y2D8 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC4.01□□□□□ -1.77
SSX2IPQ9Y2D8 RNU7-63P-201ENST00000459054 62 ntBASIC4.01□□□□□ -1.77
SSX2IPQ9Y2D8 AP000852.1-201ENST00000472460 573 ntBASIC4.01□□□□□ -1.77
SSX2IPQ9Y2D8 RN7SL293P-201ENST00000481765 281 ntBASIC4.01□□□□□ -1.77
SSX2IPQ9Y2D8 AC135721.1-201ENST00000497954 479 ntBASIC4.01□□□□□ -1.77
SSX2IPQ9Y2D8 HSPD1P15-201ENST00000505573 1122 ntBASIC4.01□□□□□ -1.77
SSX2IPQ9Y2D8 NAF1-205ENST00000509434 385 ntTSL 3 BASIC4.01□□□□□ -1.77
SSX2IPQ9Y2D8 RNU7-51P-201ENST00000516560 62 ntBASIC4.01□□□□□ -1.77
SSX2IPQ9Y2D8 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.01□□□□□ -1.77
SSX2IPQ9Y2D8 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.01□□□□□ -1.77
SSX2IPQ9Y2D8 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.01□□□□□ -1.77
SSX2IPQ9Y2D8 MGST1-215ENST00000540056 546 ntTSL 3 BASIC4.01□□□□□ -1.77
SSX2IPQ9Y2D8 ZNF192P1-203ENST00000565888 810 ntBASIC4.01□□□□□ -1.77
SSX2IPQ9Y2D8 AC006270.2-201ENST00000578523 652 ntBASIC4.01□□□□□ -1.77
SSX2IPQ9Y2D8 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.01□□□□□ -1.77
SSX2IPQ9Y2D8 AC010591.1-201ENST00000603941 649 ntBASIC4.01□□□□□ -1.77
SSX2IPQ9Y2D8 BNIP3P10-201ENST00000605360 577 ntBASIC4.01□□□□□ -1.77
SSX2IPQ9Y2D8 RNU1-30P-201ENST00000606575 163 ntBASIC4.01□□□□□ -1.77
SSX2IPQ9Y2D8 AC096577.2-201ENST00000611455 153 ntBASIC4.01□□□□□ -1.77
SSX2IPQ9Y2D8 AC104260.1-201ENST00000616660 539 ntBASIC4.01□□□□□ -1.77
SSX2IPQ9Y2D8 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.01□□□□□ -1.77
SSX2IPQ9Y2D8 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC4.01□□□□□ -1.77
SSX2IPQ9Y2D8 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SSX2IPQ9Y2D8 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.01□□□□□ -1.77
SSX2IPQ9Y2D8 PRO1804-201ENST00000623780 2050 ntBASIC4.01□□□□□ -1.77
SSX2IPQ9Y2D8 AC073346.2-201ENST00000624724 2058 ntBASIC4.01□□□□□ -1.77
SSX2IPQ9Y2D8 GABPAP-201ENST00000419271 1356 ntBASIC4.01□□□□□ -1.77
SSX2IPQ9Y2D8 PAPPA-AS1-201ENST00000445861 2450 ntBASIC4□□□□□ -1.77
SSX2IPQ9Y2D8 RNU6-451P-201ENST00000362921 107 ntBASIC4□□□□□ -1.77
SSX2IPQ9Y2D8 RNU6-511P-201ENST00000363496 107 ntBASIC4□□□□□ -1.77
SSX2IPQ9Y2D8 RNA5SP51-201ENST00000364750 119 ntBASIC4□□□□□ -1.77
SSX2IPQ9Y2D8 CRP-202ENST00000368110 667 ntTSL 3 BASIC4□□□□□ -1.77
SSX2IPQ9Y2D8 RNU6-39P-201ENST00000384344 107 ntBASIC4□□□□□ -1.77
SSX2IPQ9Y2D8 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC4□□□□□ -1.77
SSX2IPQ9Y2D8 RNU2-41P-201ENST00000410991 178 ntBASIC4□□□□□ -1.77
SSX2IPQ9Y2D8 RNU6-373P-201ENST00000411247 98 ntBASIC4□□□□□ -1.77
SSX2IPQ9Y2D8 OR51A5P-201ENST00000415429 942 ntBASIC4□□□□□ -1.77
SSX2IPQ9Y2D8 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC4□□□□□ -1.77
SSX2IPQ9Y2D8 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC4□□□□□ -1.77
SSX2IPQ9Y2D8 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC4□□□□□ -1.77
SSX2IPQ9Y2D8 MTND4P25-201ENST00000441039 533 ntBASIC4□□□□□ -1.77
SSX2IPQ9Y2D8 CYCSP35-201ENST00000451978 304 ntBASIC4□□□□□ -1.77
SSX2IPQ9Y2D8 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC4□□□□□ -1.77
SSX2IPQ9Y2D8 RPL32P34-201ENST00000486380 400 ntBASIC4□□□□□ -1.77
SSX2IPQ9Y2D8 RPS3AP50-201ENST00000487064 803 ntBASIC4□□□□□ -1.77
SSX2IPQ9Y2D8 RPL7P23-201ENST00000493874 747 ntBASIC4□□□□□ -1.77
SSX2IPQ9Y2D8 SNORD27.1-201ENST00000516319 72 ntBASIC4□□□□□ -1.77
SSX2IPQ9Y2D8 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC4□□□□□ -1.77
SSX2IPQ9Y2D8 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC4□□□□□ -1.77
SSX2IPQ9Y2D8 DEFB108D-201ENST00000527787 222 ntBASIC4□□□□□ -1.77
SSX2IPQ9Y2D8 OR5BN1P-201ENST00000532955 829 ntBASIC4□□□□□ -1.77
SSX2IPQ9Y2D8 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC4□□□□□ -1.77
SSX2IPQ9Y2D8 UBE2V2P2-201ENST00000587677 504 ntBASIC4□□□□□ -1.77
SSX2IPQ9Y2D8 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC4□□□□□ -1.77
SSX2IPQ9Y2D8 AC092628.2-201ENST00000622492 339 ntBASIC4□□□□□ -1.77
SSX2IPQ9Y2D8 AC024940.5-201ENST00000622889 474 ntBASIC4□□□□□ -1.77
SSX2IPQ9Y2D8 FRG1KP-201ENST00000623592 341 ntBASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 144.3 ms