Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 GPM6BP3-201ENST00000442797 145 ntBASIC1.58□□□□□ -2.16
HHLA3Q9XRX5 AL591719.1-201ENST00000444669 744 ntBASIC1.58□□□□□ -2.16
HHLA3Q9XRX5 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC1.58□□□□□ -2.16
HHLA3Q9XRX5 AL021397.1-201ENST00000451806 248 ntBASIC1.58□□□□□ -2.16
HHLA3Q9XRX5 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC1.58□□□□□ -2.16
HHLA3Q9XRX5 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC1.58□□□□□ -2.16
HHLA3Q9XRX5 RPS29P20-201ENST00000489592 171 ntBASIC1.58□□□□□ -2.16
HHLA3Q9XRX5 AC026414.1-201ENST00000504046 698 ntBASIC1.58□□□□□ -2.16
HHLA3Q9XRX5 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC1.58□□□□□ -2.16
HHLA3Q9XRX5 AC114786.4-201ENST00000508771 728 ntBASIC1.58□□□□□ -2.16
HHLA3Q9XRX5 AC008413.1-201ENST00000511864 177 ntBASIC1.58□□□□□ -2.16
HHLA3Q9XRX5 AC114797.1-201ENST00000514003 728 ntBASIC1.58□□□□□ -2.16
HHLA3Q9XRX5 AC022634.1-201ENST00000520765 532 ntBASIC1.58□□□□□ -2.16
HHLA3Q9XRX5 AC009063.1-201ENST00000563342 702 ntBASIC1.58□□□□□ -2.16
HHLA3Q9XRX5 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC1.58□□□□□ -2.16
HHLA3Q9XRX5 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC1.58□□□□□ -2.16
HHLA3Q9XRX5 OR10AB1P-201ENST00000609613 938 ntBASIC1.58□□□□□ -2.16
HHLA3Q9XRX5 AC005332.6-201ENST00000613178 446 ntBASIC1.58□□□□□ -2.16
HHLA3Q9XRX5 AC098657.3-201ENST00000620434 263 ntBASIC1.58□□□□□ -2.16
HHLA3Q9XRX5 MIR6852-201ENST00000621699 66 ntBASIC1.58□□□□□ -2.16
HHLA3Q9XRX5 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC1.58□□□□□ -2.16
HHLA3Q9XRX5 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC1.58□□□□□ -2.16
HHLA3Q9XRX5 AC107982.1-201ENST00000507171 1300 ntBASIC1.58□□□□□ -2.16
HHLA3Q9XRX5 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
HHLA3Q9XRX5 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC1.57□□□□□ -2.16
HHLA3Q9XRX5 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
HHLA3Q9XRX5 SNORA38-201ENST00000363946 132 ntBASIC1.57□□□□□ -2.16
HHLA3Q9XRX5 RNU6-343P-201ENST00000364709 104 ntBASIC1.57□□□□□ -2.16
HHLA3Q9XRX5 RNU6-741P-201ENST00000383889 107 ntBASIC1.57□□□□□ -2.16
HHLA3Q9XRX5 RNU1-73P-201ENST00000383971 164 ntBASIC1.57□□□□□ -2.16
HHLA3Q9XRX5 MIR221-201ENST00000385135 110 ntBASIC1.57□□□□□ -2.16
HHLA3Q9XRX5 MIR23A-201ENST00000385245 73 ntBASIC1.57□□□□□ -2.16
HHLA3Q9XRX5 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
HHLA3Q9XRX5 AL445529.1-201ENST00000398713 389 ntBASIC1.57□□□□□ -2.16
HHLA3Q9XRX5 AL603865.2-201ENST00000401679 213 ntBASIC1.57□□□□□ -2.16
HHLA3Q9XRX5 AL079342.2-201ENST00000403367 482 ntBASIC1.57□□□□□ -2.16
HHLA3Q9XRX5 SUMO2P12-201ENST00000405924 140 ntBASIC1.57□□□□□ -2.16
HHLA3Q9XRX5 HMGB1P11-201ENST00000413899 637 ntBASIC1.57□□□□□ -2.16
HHLA3Q9XRX5 MTCO1P3-201ENST00000429327 192 ntBASIC1.57□□□□□ -2.16
HHLA3Q9XRX5 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC1.57□□□□□ -2.16
HHLA3Q9XRX5 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC1.57□□□□□ -2.16
HHLA3Q9XRX5 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.57□□□□□ -2.16
HHLA3Q9XRX5 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC1.57□□□□□ -2.16
HHLA3Q9XRX5 AC109486.1-201ENST00000486833 374 ntBASIC1.57□□□□□ -2.16
HHLA3Q9XRX5 AC093801.2-201ENST00000503966 1050 ntBASIC1.57□□□□□ -2.16
HHLA3Q9XRX5 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC1.57□□□□□ -2.16
HHLA3Q9XRX5 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC1.57□□□□□ -2.16
HHLA3Q9XRX5 AC010486.1-201ENST00000511793 424 ntBASIC1.57□□□□□ -2.16
HHLA3Q9XRX5 RNU6ATAC13P-201ENST00000516152 131 ntBASIC1.57□□□□□ -2.16
HHLA3Q9XRX5 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC1.57□□□□□ -2.16
HHLA3Q9XRX5 OR5AQ1P-201ENST00000527596 927 ntBASIC1.57□□□□□ -2.16
HHLA3Q9XRX5 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC1.57□□□□□ -2.16
HHLA3Q9XRX5 AC023824.2-201ENST00000566185 400 ntBASIC1.57□□□□□ -2.16
HHLA3Q9XRX5 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC1.57□□□□□ -2.16
HHLA3Q9XRX5 MIR4672-201ENST00000583126 81 ntBASIC1.57□□□□□ -2.16
HHLA3Q9XRX5 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.57□□□□□ -2.16
HHLA3Q9XRX5 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC1.57□□□□□ -2.16
HHLA3Q9XRX5 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC1.57□□□□□ -2.16
HHLA3Q9XRX5 AL161729.4-201ENST00000604650 476 ntBASIC1.57□□□□□ -2.16
HHLA3Q9XRX5 uc_338.20-201ENST00000621563 178 ntBASIC1.57□□□□□ -2.16
HHLA3Q9XRX5 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC1.57□□□□□ -2.16
HHLA3Q9XRX5 MIR6873-201ENST00000622788 63 ntBASIC1.57□□□□□ -2.16
HHLA3Q9XRX5 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC1.57□□□□□ -2.16
HHLA3Q9XRX5 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
HHLA3Q9XRX5 MTCO1P9-201ENST00000505577 1534 ntBASIC1.56□□□□□ -2.16
HHLA3Q9XRX5 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.56□□□□□ -2.16
HHLA3Q9XRX5 AL359851.1-201ENST00000569460 4997 ntBASIC1.56□□□□□ -2.16
HHLA3Q9XRX5 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC1.56□□□□□ -2.16
HHLA3Q9XRX5 ZNF658B-202ENST00000615961 3375 ntBASIC1.56□□□□□ -2.16
HHLA3Q9XRX5 UBE2Q2P1-202ENST00000354771 883 ntBASIC1.56□□□□□ -2.16
HHLA3Q9XRX5 RNA5SP289-201ENST00000362332 137 ntBASIC1.56□□□□□ -2.16
HHLA3Q9XRX5 RNU6-28P-201ENST00000362378 107 ntBASIC1.56□□□□□ -2.16
HHLA3Q9XRX5 RNU4-82P-201ENST00000362443 140 ntBASIC1.56□□□□□ -2.16
HHLA3Q9XRX5 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC1.56□□□□□ -2.16
HHLA3Q9XRX5 RNU1-39P-201ENST00000383897 165 ntBASIC1.56□□□□□ -2.16
HHLA3Q9XRX5 RNU6-140P-201ENST00000384566 108 ntBASIC1.56□□□□□ -2.16
HHLA3Q9XRX5 SNORA48.3-201ENST00000391081 134 ntBASIC1.56□□□□□ -2.16
HHLA3Q9XRX5 RNU2-49P-201ENST00000410666 184 ntBASIC1.56□□□□□ -2.16
HHLA3Q9XRX5 RNU2-42P-201ENST00000410697 113 ntBASIC1.56□□□□□ -2.16
HHLA3Q9XRX5 RNA5SP508-201ENST00000411327 119 ntBASIC1.56□□□□□ -2.16
HHLA3Q9XRX5 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC1.56□□□□□ -2.16
HHLA3Q9XRX5 AL135786.1-201ENST00000415892 214 ntBASIC1.56□□□□□ -2.16
HHLA3Q9XRX5 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.56□□□□□ -2.16
HHLA3Q9XRX5 C1DP1-201ENST00000426049 402 ntBASIC1.56□□□□□ -2.16
HHLA3Q9XRX5 AC007919.1-201ENST00000429380 217 ntBASIC1.56□□□□□ -2.16
HHLA3Q9XRX5 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.56□□□□□ -2.16
HHLA3Q9XRX5 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC1.56□□□□□ -2.16
HHLA3Q9XRX5 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC1.56□□□□□ -2.16
HHLA3Q9XRX5 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
HHLA3Q9XRX5 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC1.56□□□□□ -2.16
HHLA3Q9XRX5 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC1.56□□□□□ -2.16
HHLA3Q9XRX5 RNA5SP233-201ENST00000459153 113 ntBASIC1.56□□□□□ -2.16
HHLA3Q9XRX5 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC1.56□□□□□ -2.16
HHLA3Q9XRX5 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC1.56□□□□□ -2.16
HHLA3Q9XRX5 RN7SKP31-201ENST00000516354 278 ntBASIC1.56□□□□□ -2.16
HHLA3Q9XRX5 RNA5SP200-201ENST00000516360 103 ntBASIC1.56□□□□□ -2.16
HHLA3Q9XRX5 SCARNA11.3-201ENST00000517276 130 ntBASIC1.56□□□□□ -2.16
HHLA3Q9XRX5 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC1.56□□□□□ -2.16
HHLA3Q9XRX5 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC1.56□□□□□ -2.16
HHLA3Q9XRX5 SNRPGP18-201ENST00000553000 214 ntBASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms