Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 AL365496.1-201ENST00000426885 215 ntBASIC2.56□□□□□ -2
NPIPA1Q9UND3 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC2.56□□□□□ -2
NPIPA1Q9UND3 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.56□□□□□ -2
NPIPA1Q9UND3 AC106872.3-201ENST00000495104 446 ntBASIC2.56□□□□□ -2
NPIPA1Q9UND3 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.56□□□□□ -2
NPIPA1Q9UND3 AIG1P1-201ENST00000503376 148 ntBASIC2.56□□□□□ -2
NPIPA1Q9UND3 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.56□□□□□ -2
NPIPA1Q9UND3 SEM1P1-201ENST00000506694 209 ntBASIC2.56□□□□□ -2
NPIPA1Q9UND3 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC2.56□□□□□ -2
NPIPA1Q9UND3 HPRT1P3-201ENST00000539521 576 ntBASIC2.56□□□□□ -2
NPIPA1Q9UND3 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.56□□□□□ -2
NPIPA1Q9UND3 AC090115.4-201ENST00000609970 188 ntBASIC2.56□□□□□ -2
NPIPA1Q9UND3 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC2.56□□□□□ -2
NPIPA1Q9UND3 AL607023.1-201ENST00000620045 248 ntBASIC2.56□□□□□ -2
NPIPA1Q9UND3 MTND1P37-201ENST00000636562 264 ntBASIC2.56□□□□□ -2
NPIPA1Q9UND3 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC2.56□□□□□ -2
NPIPA1Q9UND3 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.56□□□□□ -2
NPIPA1Q9UND3 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.56□□□□□ -2
NPIPA1Q9UND3 AC092125.1-201ENST00000562568 1995 ntBASIC2.56□□□□□ -2
NPIPA1Q9UND3 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC2.56□□□□□ -2
NPIPA1Q9UND3 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.55□□□□□ -2
NPIPA1Q9UND3 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
NPIPA1Q9UND3 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
NPIPA1Q9UND3 AL513331.1-201ENST00000411908 397 ntBASIC2.55□□□□□ -2
NPIPA1Q9UND3 BX682237.1-201ENST00000415016 335 ntBASIC2.55□□□□□ -2
NPIPA1Q9UND3 AL008987.1-201ENST00000415528 237 ntBASIC2.55□□□□□ -2
NPIPA1Q9UND3 AL513477.1-202ENST00000417061 214 ntBASIC2.55□□□□□ -2
NPIPA1Q9UND3 ZNF863P-201ENST00000426746 417 ntBASIC2.55□□□□□ -2
NPIPA1Q9UND3 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.55□□□□□ -2
NPIPA1Q9UND3 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC2.55□□□□□ -2
NPIPA1Q9UND3 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC2.55□□□□□ -2
NPIPA1Q9UND3 MTCO3P45-201ENST00000443036 613 ntBASIC2.55□□□□□ -2
NPIPA1Q9UND3 MTCYBP3-201ENST00000445588 1137 ntBASIC2.55□□□□□ -2
NPIPA1Q9UND3 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC2.55□□□□□ -2
NPIPA1Q9UND3 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC2.55□□□□□ -2
NPIPA1Q9UND3 RNU7-23P-201ENST00000459465 62 ntBASIC2.55□□□□□ -2
NPIPA1Q9UND3 AC008481.1-201ENST00000463278 396 ntBASIC2.55□□□□□ -2
NPIPA1Q9UND3 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC2.55□□□□□ -2
NPIPA1Q9UND3 AC105185.1-201ENST00000518705 535 ntBASIC2.55□□□□□ -2
NPIPA1Q9UND3 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC2.55□□□□□ -2
NPIPA1Q9UND3 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.55□□□□□ -2
NPIPA1Q9UND3 MTCO1P47-201ENST00000523889 1271 ntBASIC2.55□□□□□ -2
NPIPA1Q9UND3 AC087373.1-201ENST00000524920 491 ntBASIC2.55□□□□□ -2
NPIPA1Q9UND3 AC013828.2-201ENST00000532487 235 ntBASIC2.55□□□□□ -2
NPIPA1Q9UND3 MTCO2P15-201ENST00000532655 656 ntBASIC2.55□□□□□ -2
NPIPA1Q9UND3 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC2.55□□□□□ -2
NPIPA1Q9UND3 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.55□□□□□ -2
NPIPA1Q9UND3 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC2.55□□□□□ -2
NPIPA1Q9UND3 AC087465.1-201ENST00000560574 245 ntBASIC2.55□□□□□ -2
NPIPA1Q9UND3 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC2.55□□□□□ -2
NPIPA1Q9UND3 AC010620.2-201ENST00000600135 313 ntBASIC2.55□□□□□ -2
NPIPA1Q9UND3 AL161729.4-201ENST00000604650 476 ntBASIC2.55□□□□□ -2
NPIPA1Q9UND3 MTND4LP5-201ENST00000605152 292 ntBASIC2.55□□□□□ -2
NPIPA1Q9UND3 AC024933.1-201ENST00000608472 348 ntBASIC2.55□□□□□ -2
NPIPA1Q9UND3 AC024560.3-201ENST00000608482 349 ntBASIC2.55□□□□□ -2
NPIPA1Q9UND3 AP000676.3-201ENST00000623299 569 ntBASIC2.55□□□□□ -2
NPIPA1Q9UND3 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC2.55□□□□□ -2
NPIPA1Q9UND3 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.55□□□□□ -2
NPIPA1Q9UND3 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.55□□□□□ -2
NPIPA1Q9UND3 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
NPIPA1Q9UND3 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
NPIPA1Q9UND3 MTND5P33-201ENST00000571250 1450 ntBASIC2.54□□□□□ -2
NPIPA1Q9UND3 RNU6-433P-201ENST00000363216 104 ntBASIC2.54□□□□□ -2
NPIPA1Q9UND3 RNA5SP88-201ENST00000365560 109 ntBASIC2.54□□□□□ -2
NPIPA1Q9UND3 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
NPIPA1Q9UND3 RNU6-217P-201ENST00000384164 104 ntBASIC2.54□□□□□ -2
NPIPA1Q9UND3 AL138827.1-201ENST00000402666 306 ntBASIC2.54□□□□□ -2
NPIPA1Q9UND3 CCNG1P1-201ENST00000406783 885 ntBASIC2.54□□□□□ -2
NPIPA1Q9UND3 RNU2-33P-201ENST00000410344 192 ntBASIC2.54□□□□□ -2
NPIPA1Q9UND3 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.54□□□□□ -2
NPIPA1Q9UND3 RPL21P24-201ENST00000413752 448 ntBASIC2.54□□□□□ -2
NPIPA1Q9UND3 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC2.54□□□□□ -2
NPIPA1Q9UND3 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.54□□□□□ -2
NPIPA1Q9UND3 ARL5AP4-201ENST00000430731 512 ntBASIC2.54□□□□□ -2
NPIPA1Q9UND3 MTND1P32-201ENST00000433043 938 ntBASIC2.54□□□□□ -2
NPIPA1Q9UND3 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC2.54□□□□□ -2
NPIPA1Q9UND3 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.54□□□□□ -2
NPIPA1Q9UND3 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC2.54□□□□□ -2
NPIPA1Q9UND3 WASF1P1-201ENST00000447560 1131 ntBASIC2.54□□□□□ -2
NPIPA1Q9UND3 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.54□□□□□ -2
NPIPA1Q9UND3 RPL12P25-201ENST00000455592 494 ntBASIC2.54□□□□□ -2
NPIPA1Q9UND3 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC2.54□□□□□ -2
NPIPA1Q9UND3 RPS20P22-201ENST00000473700 357 ntBASIC2.54□□□□□ -2
NPIPA1Q9UND3 AC126389.1-201ENST00000477436 290 ntBASIC2.54□□□□□ -2
NPIPA1Q9UND3 RN7SL429P-201ENST00000479090 223 ntBASIC2.54□□□□□ -2
NPIPA1Q9UND3 RN7SL489P-201ENST00000486185 223 ntBASIC2.54□□□□□ -2
NPIPA1Q9UND3 RN7SL327P-201ENST00000488659 223 ntBASIC2.54□□□□□ -2
NPIPA1Q9UND3 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.54□□□□□ -2
NPIPA1Q9UND3 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC2.54□□□□□ -2
NPIPA1Q9UND3 SUMO2P6-201ENST00000505273 288 ntBASIC2.54□□□□□ -2
NPIPA1Q9UND3 CDC42P4-201ENST00000510507 563 ntBASIC2.54□□□□□ -2
NPIPA1Q9UND3 AC114781.4-201ENST00000513707 639 ntBASIC2.54□□□□□ -2
NPIPA1Q9UND3 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC2.54□□□□□ -2
NPIPA1Q9UND3 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.54□□□□□ -2
NPIPA1Q9UND3 AL133153.1-201ENST00000557756 303 ntBASIC2.54□□□□□ -2
NPIPA1Q9UND3 MIR544B-201ENST00000582372 78 ntBASIC2.54□□□□□ -2
NPIPA1Q9UND3 HMGN2P15-201ENST00000585707 270 ntBASIC2.54□□□□□ -2
NPIPA1Q9UND3 AC061975.8-201ENST00000587058 721 ntBASIC2.54□□□□□ -2
NPIPA1Q9UND3 BNIP3P40-201ENST00000596017 556 ntBASIC2.54□□□□□ -2
NPIPA1Q9UND3 RPL23AP78-201ENST00000599928 470 ntBASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms