Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SHROOM4Q9ULL8 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
SHROOM4Q9ULL8 AC012321.1-201ENST00000561622 1588 ntBASIC5.28□□□□□ -1.56
SHROOM4Q9ULL8 SNORA23-201ENST00000365128 182 ntBASIC5.28□□□□□ -1.56
SHROOM4Q9ULL8 RNU4-72P-201ENST00000410754 173 ntBASIC5.28□□□□□ -1.56
SHROOM4Q9ULL8 Z99497.1-201ENST00000421282 135 ntBASIC5.28□□□□□ -1.56
SHROOM4Q9ULL8 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC5.28□□□□□ -1.56
SHROOM4Q9ULL8 AC109583.1-201ENST00000432156 268 ntBASIC5.28□□□□□ -1.56
SHROOM4Q9ULL8 RPL7P34-201ENST00000433316 712 ntBASIC5.28□□□□□ -1.56
SHROOM4Q9ULL8 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC5.28□□□□□ -1.56
SHROOM4Q9ULL8 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC5.28□□□□□ -1.56
SHROOM4Q9ULL8 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC5.28□□□□□ -1.56
SHROOM4Q9ULL8 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC5.28□□□□□ -1.56
SHROOM4Q9ULL8 MTCO2P6-201ENST00000463134 685 ntBASIC5.28□□□□□ -1.56
SHROOM4Q9ULL8 RPS15AP36-201ENST00000492022 382 ntBASIC5.28□□□□□ -1.56
SHROOM4Q9ULL8 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC5.28□□□□□ -1.56
SHROOM4Q9ULL8 RNU6-840P-201ENST00000517275 65 ntBASIC5.28□□□□□ -1.56
SHROOM4Q9ULL8 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC5.28□□□□□ -1.56
SHROOM4Q9ULL8 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC5.28□□□□□ -1.56
SHROOM4Q9ULL8 AL355836.1-201ENST00000555951 870 ntBASIC5.28□□□□□ -1.56
SHROOM4Q9ULL8 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC5.28□□□□□ -1.56
SHROOM4Q9ULL8 UBE2L4-201ENST00000587688 464 ntBASIC5.28□□□□□ -1.56
SHROOM4Q9ULL8 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SHROOM4Q9ULL8 AC078899.3-201ENST00000599065 212 ntBASIC5.28□□□□□ -1.56
SHROOM4Q9ULL8 AP000254.1-201ENST00000609934 520 ntBASIC5.28□□□□□ -1.56
SHROOM4Q9ULL8 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC5.28□□□□□ -1.56
SHROOM4Q9ULL8 MIR7844-201ENST00000616161 122 ntBASIC5.28□□□□□ -1.56
SHROOM4Q9ULL8 U7.8-201ENST00000619968 63 ntBASIC5.28□□□□□ -1.56
SHROOM4Q9ULL8 AL158801.5-201ENST00000623123 465 ntBASIC5.28□□□□□ -1.56
SHROOM4Q9ULL8 AC092192.1-201ENST00000633154 1018 ntBASIC5.28□□□□□ -1.56
SHROOM4Q9ULL8 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SHROOM4Q9ULL8 AL138713.1-201ENST00000624026 2130 ntBASIC5.28□□□□□ -1.56
SHROOM4Q9ULL8 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC5.28□□□□□ -1.56
SHROOM4Q9ULL8 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC5.27□□□□□ -1.57
SHROOM4Q9ULL8 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
SHROOM4Q9ULL8 RNA5SP274-201ENST00000410484 108 ntBASIC5.27□□□□□ -1.57
SHROOM4Q9ULL8 AMD1P2-201ENST00000412936 992 ntBASIC5.27□□□□□ -1.57
SHROOM4Q9ULL8 UBE2FP1-201ENST00000416536 447 ntBASIC5.27□□□□□ -1.57
SHROOM4Q9ULL8 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC5.27□□□□□ -1.57
SHROOM4Q9ULL8 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC5.27□□□□□ -1.57
SHROOM4Q9ULL8 AL590383.1-201ENST00000428602 75 ntBASIC5.27□□□□□ -1.57
SHROOM4Q9ULL8 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC5.27□□□□□ -1.57
SHROOM4Q9ULL8 UBE2D3P1-201ENST00000436669 444 ntBASIC5.27□□□□□ -1.57
SHROOM4Q9ULL8 ART2BP-201ENST00000453501 499 ntBASIC5.27□□□□□ -1.57
SHROOM4Q9ULL8 AC010486.2-201ENST00000505572 483 ntBASIC5.27□□□□□ -1.57
SHROOM4Q9ULL8 CDC42P4-201ENST00000510507 563 ntBASIC5.27□□□□□ -1.57
SHROOM4Q9ULL8 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC5.27□□□□□ -1.57
SHROOM4Q9ULL8 AP000857.1-201ENST00000532151 543 ntBASIC5.27□□□□□ -1.57
SHROOM4Q9ULL8 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC5.27□□□□□ -1.57
SHROOM4Q9ULL8 CLPTM1LP1-201ENST00000604519 484 ntBASIC5.27□□□□□ -1.57
SHROOM4Q9ULL8 AC007038.2-201ENST00000608095 740 ntBASIC5.27□□□□□ -1.57
SHROOM4Q9ULL8 AC004223.4-201ENST00000612426 332 ntBASIC5.27□□□□□ -1.57
SHROOM4Q9ULL8 AC013476.2-201ENST00000614456 459 ntBASIC5.27□□□□□ -1.57
SHROOM4Q9ULL8 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
SHROOM4Q9ULL8 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SHROOM4Q9ULL8 AF228730.1-201ENST00000397972 663 ntBASIC5.26□□□□□ -1.57
SHROOM4Q9ULL8 RN7SKP223-201ENST00000410582 62 ntBASIC5.26□□□□□ -1.57
SHROOM4Q9ULL8 RNU6-920P-201ENST00000410926 92 ntBASIC5.26□□□□□ -1.57
SHROOM4Q9ULL8 NEK4P1-201ENST00000433383 879 ntBASIC5.26□□□□□ -1.57
SHROOM4Q9ULL8 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC5.26□□□□□ -1.57
SHROOM4Q9ULL8 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC5.26□□□□□ -1.57
SHROOM4Q9ULL8 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC5.26□□□□□ -1.57
SHROOM4Q9ULL8 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC5.26□□□□□ -1.57
SHROOM4Q9ULL8 MTCO1P42-201ENST00000457379 726 ntBASIC5.26□□□□□ -1.57
SHROOM4Q9ULL8 RNU6-1003P-201ENST00000517099 105 ntBASIC5.26□□□□□ -1.57
SHROOM4Q9ULL8 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC5.26□□□□□ -1.57
SHROOM4Q9ULL8 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC5.26□□□□□ -1.57
SHROOM4Q9ULL8 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC5.26□□□□□ -1.57
SHROOM4Q9ULL8 MTND3P12-201ENST00000559068 328 ntBASIC5.26□□□□□ -1.57
SHROOM4Q9ULL8 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC5.26□□□□□ -1.57
SHROOM4Q9ULL8 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
SHROOM4Q9ULL8 AL356266.1-201ENST00000623311 483 ntBASIC5.26□□□□□ -1.57
SHROOM4Q9ULL8 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC5.26□□□□□ -1.57
SHROOM4Q9ULL8 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
SHROOM4Q9ULL8 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SHROOM4Q9ULL8 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
SHROOM4Q9ULL8 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SHROOM4Q9ULL8 AL031577.2-201ENST00000404133 280 ntBASIC5.26□□□□□ -1.57
SHROOM4Q9ULL8 AL159169.1-201ENST00000421119 127 ntBASIC5.26□□□□□ -1.57
SHROOM4Q9ULL8 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC5.26□□□□□ -1.57
SHROOM4Q9ULL8 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC5.26□□□□□ -1.57
SHROOM4Q9ULL8 AC009237.8-201ENST00000445492 379 ntBASIC5.26□□□□□ -1.57
SHROOM4Q9ULL8 UQCRHP3-201ENST00000451503 251 ntBASIC5.26□□□□□ -1.57
SHROOM4Q9ULL8 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC5.26□□□□□ -1.57
SHROOM4Q9ULL8 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC5.26□□□□□ -1.57
SHROOM4Q9ULL8 RN7SL75P-201ENST00000461926 281 ntBASIC5.26□□□□□ -1.57
SHROOM4Q9ULL8 AC055855.1-201ENST00000489563 579 ntBASIC5.26□□□□□ -1.57
SHROOM4Q9ULL8 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SHROOM4Q9ULL8 MAL2-206ENST00000522187 547 ntTSL 4 BASIC5.26□□□□□ -1.57
SHROOM4Q9ULL8 AL163153.1-201ENST00000554223 283 ntBASIC5.26□□□□□ -1.57
SHROOM4Q9ULL8 OR4T1P-201ENST00000554933 911 ntBASIC5.26□□□□□ -1.57
SHROOM4Q9ULL8 AP000403.1-201ENST00000603349 851 ntBASIC5.26□□□□□ -1.57
SHROOM4Q9ULL8 AC068313.1-201ENST00000604028 1008 ntBASIC5.26□□□□□ -1.57
SHROOM4Q9ULL8 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SHROOM4Q9ULL8 TUG1_2.1-201ENST00000614234 87 ntBASIC5.26□□□□□ -1.57
SHROOM4Q9ULL8 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC5.26□□□□□ -1.57
SHROOM4Q9ULL8 AC097520.1-201ENST00000624435 385 ntBASIC5.26□□□□□ -1.57
SHROOM4Q9ULL8 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC5.26□□□□□ -1.57
SHROOM4Q9ULL8 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC5.25□□□□□ -1.57
SHROOM4Q9ULL8 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms