Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.48□□□□□ -2.17
SCN11AQ9UI33 AC009812.4-201ENST00000569134 1805 ntBASIC1.48□□□□□ -2.17
SCN11AQ9UI33 RNU6-335P-201ENST00000364563 113 ntBASIC1.48□□□□□ -2.17
SCN11AQ9UI33 RNU6-882P-201ENST00000391025 103 ntBASIC1.48□□□□□ -2.17
SCN11AQ9UI33 AL034374.1-201ENST00000406329 351 ntBASIC1.48□□□□□ -2.17
SCN11AQ9UI33 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.48□□□□□ -2.17
SCN11AQ9UI33 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC1.48□□□□□ -2.17
SCN11AQ9UI33 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.48□□□□□ -2.17
SCN11AQ9UI33 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.48□□□□□ -2.17
SCN11AQ9UI33 DUXAP5-201ENST00000529668 529 ntBASIC1.48□□□□□ -2.17
SCN11AQ9UI33 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC1.48□□□□□ -2.17
SCN11AQ9UI33 UBE2L4-201ENST00000587688 464 ntBASIC1.48□□□□□ -2.17
SCN11AQ9UI33 AC009902.3-201ENST00000606235 2172 ntBASIC1.48□□□□□ -2.17
SCN11AQ9UI33 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
SCN11AQ9UI33 SNORA38-201ENST00000363946 132 ntBASIC1.47□□□□□ -2.17
SCN11AQ9UI33 MIR625-201ENST00000385047 85 ntBASIC1.47□□□□□ -2.17
SCN11AQ9UI33 RPL7P27-201ENST00000403775 720 ntBASIC1.47□□□□□ -2.17
SCN11AQ9UI33 RPS20P15-201ENST00000412792 311 ntBASIC1.47□□□□□ -2.17
SCN11AQ9UI33 XKRYP1-201ENST00000423438 492 ntBASIC1.47□□□□□ -2.17
SCN11AQ9UI33 XKRYP2-201ENST00000432915 492 ntBASIC1.47□□□□□ -2.17
SCN11AQ9UI33 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
SCN11AQ9UI33 AL121601.2-201ENST00000438019 707 ntBASIC1.47□□□□□ -2.17
SCN11AQ9UI33 BTF3P12-201ENST00000519620 469 ntBASIC1.47□□□□□ -2.17
SCN11AQ9UI33 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.47□□□□□ -2.17
SCN11AQ9UI33 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC1.47□□□□□ -2.17
SCN11AQ9UI33 HMGB1P24-202ENST00000615653 685 ntBASIC1.47□□□□□ -2.17
SCN11AQ9UI33 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC1.47□□□□□ -2.17
SCN11AQ9UI33 AC011330.2-201ENST00000621680 635 ntBASIC1.47□□□□□ -2.17
SCN11AQ9UI33 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC1.47□□□□□ -2.17
SCN11AQ9UI33 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
SCN11AQ9UI33 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
SCN11AQ9UI33 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
SCN11AQ9UI33 MIR513A1-201ENST00000385138 129 ntBASIC1.47□□□□□ -2.17
SCN11AQ9UI33 MIR758-201ENST00000390227 88 ntBASIC1.47□□□□□ -2.17
SCN11AQ9UI33 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC1.47□□□□□ -2.17
SCN11AQ9UI33 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC1.47□□□□□ -2.17
SCN11AQ9UI33 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.47□□□□□ -2.17
SCN11AQ9UI33 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC1.47□□□□□ -2.17
SCN11AQ9UI33 AC008749.1-201ENST00000597650 306 ntBASIC1.47□□□□□ -2.17
SCN11AQ9UI33 AC123912.5-201ENST00000605470 343 ntBASIC1.47□□□□□ -2.17
SCN11AQ9UI33 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
SCN11AQ9UI33 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.47□□□□□ -2.17
SCN11AQ9UI33 SNORA18.2-201ENST00000383865 132 ntBASIC1.46□□□□□ -2.18
SCN11AQ9UI33 AP002784.2-201ENST00000397300 549 ntBASIC1.46□□□□□ -2.18
SCN11AQ9UI33 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC1.46□□□□□ -2.18
SCN11AQ9UI33 AL022400.1-201ENST00000423946 935 ntBASIC1.46□□□□□ -2.18
SCN11AQ9UI33 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC1.46□□□□□ -2.18
SCN11AQ9UI33 ATG12P2-201ENST00000456830 416 ntBASIC1.46□□□□□ -2.18
SCN11AQ9UI33 AC087272.1-201ENST00000523624 533 ntBASIC1.46□□□□□ -2.18
SCN11AQ9UI33 OR10V3P-201ENST00000525712 725 ntBASIC1.46□□□□□ -2.18
SCN11AQ9UI33 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
SCN11AQ9UI33 HMGN1P33-201ENST00000432945 451 ntBASIC1.45□□□□□ -2.18
SCN11AQ9UI33 ELOCP11-201ENST00000436690 332 ntBASIC1.45□□□□□ -2.18
SCN11AQ9UI33 ELOCP16-201ENST00000444494 332 ntBASIC1.45□□□□□ -2.18
SCN11AQ9UI33 SETP11-201ENST00000473027 690 ntBASIC1.45□□□□□ -2.18
SCN11AQ9UI33 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC1.45□□□□□ -2.18
SCN11AQ9UI33 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC1.45□□□□□ -2.18
SCN11AQ9UI33 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.45□□□□□ -2.18
SCN11AQ9UI33 AC023824.2-201ENST00000566185 400 ntBASIC1.45□□□□□ -2.18
SCN11AQ9UI33 AGGF1P5-201ENST00000567900 919 ntBASIC1.45□□□□□ -2.18
SCN11AQ9UI33 U73023.1-201ENST00000603134 700 ntBASIC1.45□□□□□ -2.18
SCN11AQ9UI33 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.45□□□□□ -2.18
SCN11AQ9UI33 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
SCN11AQ9UI33 Y_RNA.393-201ENST00000383936 102 ntBASIC1.44□□□□□ -2.18
SCN11AQ9UI33 RPL21P32-201ENST00000419877 477 ntBASIC1.44□□□□□ -2.18
SCN11AQ9UI33 RPL7P30-201ENST00000420888 709 ntBASIC1.44□□□□□ -2.18
SCN11AQ9UI33 AL583843.1-201ENST00000456070 346 ntBASIC1.44□□□□□ -2.18
SCN11AQ9UI33 PMCHL2-203ENST00000457791 237 ntBASIC1.44□□□□□ -2.18
SCN11AQ9UI33 AC021087.2-201ENST00000504656 1203 ntBASIC1.44□□□□□ -2.18
SCN11AQ9UI33 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.44□□□□□ -2.18
SCN11AQ9UI33 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.44□□□□□ -2.18
SCN11AQ9UI33 AC118942.1-201ENST00000529674 1035 ntBASIC1.44□□□□□ -2.18
SCN11AQ9UI33 AC068620.4-201ENST00000636730 1182 ntBASIC1.44□□□□□ -2.18
SCN11AQ9UI33 SGO1P2-201ENST00000429458 1589 ntBASIC1.44□□□□□ -2.18
SCN11AQ9UI33 ZNF33BP1-201ENST00000452497 1834 ntBASIC1.44□□□□□ -2.18
SCN11AQ9UI33 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
SCN11AQ9UI33 CISD1P1-201ENST00000393907 327 ntBASIC1.44□□□□□ -2.18
SCN11AQ9UI33 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.44□□□□□ -2.18
SCN11AQ9UI33 CYCSP33-201ENST00000414485 327 ntBASIC1.44□□□□□ -2.18
SCN11AQ9UI33 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.44□□□□□ -2.18
SCN11AQ9UI33 TPRKBP1-201ENST00000456243 481 ntBASIC1.44□□□□□ -2.18
SCN11AQ9UI33 RPL30P12-201ENST00000474666 353 ntBASIC1.44□□□□□ -2.18
SCN11AQ9UI33 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC1.44□□□□□ -2.18
SCN11AQ9UI33 AC025918.2-201ENST00000558683 763 ntBASIC1.44□□□□□ -2.18
SCN11AQ9UI33 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC1.44□□□□□ -2.18
SCN11AQ9UI33 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC1.44□□□□□ -2.18
SCN11AQ9UI33 AC073592.7-201ENST00000623659 507 ntBASIC1.44□□□□□ -2.18
SCN11AQ9UI33 RNU4-38P-201ENST00000364472 129 ntBASIC1.43□□□□□ -2.18
SCN11AQ9UI33 RNU1-148P-201ENST00000384472 162 ntBASIC1.43□□□□□ -2.18
SCN11AQ9UI33 RNA5SP465-201ENST00000391195 109 ntBASIC1.43□□□□□ -2.18
SCN11AQ9UI33 ARL2BPP3-201ENST00000421226 480 ntBASIC1.43□□□□□ -2.18
SCN11AQ9UI33 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC1.43□□□□□ -2.18
SCN11AQ9UI33 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.43□□□□□ -2.18
SCN11AQ9UI33 THAP5P1-201ENST00000439089 262 ntBASIC1.43□□□□□ -2.18
SCN11AQ9UI33 AL627224.1-201ENST00000448334 444 ntBASIC1.43□□□□□ -2.18
SCN11AQ9UI33 AC023825.1-201ENST00000566704 1030 ntBASIC1.43□□□□□ -2.18
SCN11AQ9UI33 MIR3117-201ENST00000584034 78 ntBASIC1.43□□□□□ -2.18
SCN11AQ9UI33 AL590282.1-201ENST00000610379 1136 ntBASIC1.43□□□□□ -2.18
SCN11AQ9UI33 AC021755.4-201ENST00000616620 456 ntBASIC1.43□□□□□ -2.18
SCN11AQ9UI33 AC116563.2-201ENST00000624751 535 ntBASIC1.43□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms