Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 AC084781.2-201ENST00000615568 161 ntBASIC4.46□□□□□ -1.7
PPARGC1AQ9UBK2 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.46□□□□□ -1.7
PPARGC1AQ9UBK2 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.46□□□□□ -1.7
PPARGC1AQ9UBK2 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PPARGC1AQ9UBK2 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PPARGC1AQ9UBK2 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.46□□□□□ -1.7
PPARGC1AQ9UBK2 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PPARGC1AQ9UBK2 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PPARGC1AQ9UBK2 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
PPARGC1AQ9UBK2 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.45□□□□□ -1.7
PPARGC1AQ9UBK2 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
PPARGC1AQ9UBK2 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PPARGC1AQ9UBK2 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PPARGC1AQ9UBK2 Y_RNA.187-201ENST00000363918 113 ntBASIC4.45□□□□□ -1.7
PPARGC1AQ9UBK2 SNORD116-11-201ENST00000383882 92 ntBASIC4.45□□□□□ -1.7
PPARGC1AQ9UBK2 RNU6-128P-201ENST00000383976 107 ntBASIC4.45□□□□□ -1.7
PPARGC1AQ9UBK2 RNU6-76P-201ENST00000384060 104 ntBASIC4.45□□□□□ -1.7
PPARGC1AQ9UBK2 Y_RNA.482-201ENST00000384377 111 ntBASIC4.45□□□□□ -1.7
PPARGC1AQ9UBK2 SNORD3H-201ENST00000384486 214 ntBASIC4.45□□□□□ -1.7
PPARGC1AQ9UBK2 MIR93-201ENST00000385024 80 ntBASIC4.45□□□□□ -1.7
PPARGC1AQ9UBK2 RNU4-25P-201ENST00000410569 230 ntBASIC4.45□□□□□ -1.7
PPARGC1AQ9UBK2 RNU4-14P-201ENST00000410858 122 ntBASIC4.45□□□□□ -1.7
PPARGC1AQ9UBK2 RNU6-954P-201ENST00000411355 107 ntBASIC4.45□□□□□ -1.7
PPARGC1AQ9UBK2 AC011933.1-201ENST00000413334 321 ntBASIC4.45□□□□□ -1.7
PPARGC1AQ9UBK2 RPLP0P7-201ENST00000416050 667 ntBASIC4.45□□□□□ -1.7
PPARGC1AQ9UBK2 SSXP9-201ENST00000417503 292 ntBASIC4.45□□□□□ -1.7
PPARGC1AQ9UBK2 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC4.45□□□□□ -1.7
PPARGC1AQ9UBK2 AL157831.1-201ENST00000426134 473 ntBASIC4.45□□□□□ -1.7
PPARGC1AQ9UBK2 RPL23AP89-201ENST00000439324 255 ntBASIC4.45□□□□□ -1.7
PPARGC1AQ9UBK2 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC4.45□□□□□ -1.7
PPARGC1AQ9UBK2 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.45□□□□□ -1.7
PPARGC1AQ9UBK2 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.45□□□□□ -1.7
PPARGC1AQ9UBK2 RPL23AP81-201ENST00000455252 467 ntBASIC4.45□□□□□ -1.7
PPARGC1AQ9UBK2 OARD1-209ENST00000471367 401 ntTSL 2 BASIC4.45□□□□□ -1.7
PPARGC1AQ9UBK2 RN7SL691P-201ENST00000494487 301 ntBASIC4.45□□□□□ -1.7
PPARGC1AQ9UBK2 RPS27AP13-201ENST00000498403 237 ntBASIC4.45□□□□□ -1.7
PPARGC1AQ9UBK2 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC4.45□□□□□ -1.7
PPARGC1AQ9UBK2 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.45□□□□□ -1.7
PPARGC1AQ9UBK2 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC4.45□□□□□ -1.7
PPARGC1AQ9UBK2 AL592156.1-201ENST00000508758 304 ntBASIC4.45□□□□□ -1.7
PPARGC1AQ9UBK2 VWA8P1-201ENST00000510889 176 ntBASIC4.45□□□□□ -1.7
PPARGC1AQ9UBK2 AC006499.6-201ENST00000511169 607 ntBASIC4.45□□□□□ -1.7
PPARGC1AQ9UBK2 RNA5SP73-201ENST00000516744 108 ntBASIC4.45□□□□□ -1.7
PPARGC1AQ9UBK2 RN7SKP60-201ENST00000516985 239 ntBASIC4.45□□□□□ -1.7
PPARGC1AQ9UBK2 COPS8P3-201ENST00000526024 482 ntBASIC4.45□□□□□ -1.7
PPARGC1AQ9UBK2 AP004242.1-201ENST00000533701 349 ntBASIC4.45□□□□□ -1.7
PPARGC1AQ9UBK2 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC4.45□□□□□ -1.7
PPARGC1AQ9UBK2 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.45□□□□□ -1.7
PPARGC1AQ9UBK2 BNIP3P5-201ENST00000562290 498 ntBASIC4.45□□□□□ -1.7
PPARGC1AQ9UBK2 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.45□□□□□ -1.7
PPARGC1AQ9UBK2 RPL23AP84-201ENST00000571193 464 ntBASIC4.45□□□□□ -1.7
PPARGC1AQ9UBK2 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.45□□□□□ -1.7
PPARGC1AQ9UBK2 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
PPARGC1AQ9UBK2 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC4.45□□□□□ -1.7
PPARGC1AQ9UBK2 AL670379.4-201ENST00000605279 254 ntBASIC4.45□□□□□ -1.7
PPARGC1AQ9UBK2 AC098657.3-201ENST00000620434 263 ntBASIC4.45□□□□□ -1.7
PPARGC1AQ9UBK2 AL359757.2-201ENST00000624309 274 ntBASIC4.45□□□□□ -1.7
PPARGC1AQ9UBK2 MTND4LP32-201ENST00000636111 270 ntBASIC4.45□□□□□ -1.7
PPARGC1AQ9UBK2 AC011266.1-201ENST00000624119 3569 ntBASIC4.45□□□□□ -1.7
PPARGC1AQ9UBK2 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
PPARGC1AQ9UBK2 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
PPARGC1AQ9UBK2 AL365440.1-201ENST00000436135 2167 ntBASIC4.44□□□□□ -1.7
PPARGC1AQ9UBK2 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.44□□□□□ -1.7
PPARGC1AQ9UBK2 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC4.44□□□□□ -1.7
PPARGC1AQ9UBK2 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PPARGC1AQ9UBK2 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.44□□□□□ -1.7
PPARGC1AQ9UBK2 Y_RNA.146-201ENST00000363549 102 ntBASIC4.44□□□□□ -1.7
PPARGC1AQ9UBK2 RNA5SP366-201ENST00000365454 123 ntBASIC4.44□□□□□ -1.7
PPARGC1AQ9UBK2 RNU6-474P-201ENST00000384243 107 ntBASIC4.44□□□□□ -1.7
PPARGC1AQ9UBK2 MIR606-201ENST00000384851 96 ntBASIC4.44□□□□□ -1.7
PPARGC1AQ9UBK2 MIR3074-201ENST00000384885 81 ntBASIC4.44□□□□□ -1.7
PPARGC1AQ9UBK2 MIR141-201ENST00000384975 95 ntBASIC4.44□□□□□ -1.7
PPARGC1AQ9UBK2 SNORA16.2-201ENST00000390991 127 ntBASIC4.44□□□□□ -1.7
PPARGC1AQ9UBK2 SNORD70.1-201ENST00000391007 85 ntBASIC4.44□□□□□ -1.7
PPARGC1AQ9UBK2 AL139397.2-201ENST00000404529 772 ntBASIC4.44□□□□□ -1.7
PPARGC1AQ9UBK2 RNA5SP104-201ENST00000410989 118 ntBASIC4.44□□□□□ -1.7
PPARGC1AQ9UBK2 Y_RNA.625-201ENST00000411256 107 ntBASIC4.44□□□□□ -1.7
PPARGC1AQ9UBK2 AC016397.1-201ENST00000412463 242 ntBASIC4.44□□□□□ -1.7
PPARGC1AQ9UBK2 AC080125.1-201ENST00000414888 684 ntBASIC4.44□□□□□ -1.7
PPARGC1AQ9UBK2 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.44□□□□□ -1.7
PPARGC1AQ9UBK2 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.44□□□□□ -1.7
PPARGC1AQ9UBK2 RBMY1KP-201ENST00000423480 476 ntBASIC4.44□□□□□ -1.7
PPARGC1AQ9UBK2 HMGN2P21-201ENST00000447764 270 ntBASIC4.44□□□□□ -1.7
PPARGC1AQ9UBK2 ABCF2P2-201ENST00000450549 296 ntBASIC4.44□□□□□ -1.7
PPARGC1AQ9UBK2 AC009220.1-201ENST00000451614 275 ntBASIC4.44□□□□□ -1.7
PPARGC1AQ9UBK2 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC4.44□□□□□ -1.7
PPARGC1AQ9UBK2 VN1R105P-201ENST00000486595 910 ntBASIC4.44□□□□□ -1.7
PPARGC1AQ9UBK2 AC078817.1-201ENST00000492623 435 ntBASIC4.44□□□□□ -1.7
PPARGC1AQ9UBK2 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC4.44□□□□□ -1.7
PPARGC1AQ9UBK2 AP002812.1-201ENST00000495378 474 ntBASIC4.44□□□□□ -1.7
PPARGC1AQ9UBK2 CEACAMP10-202ENST00000495431 496 ntBASIC4.44□□□□□ -1.7
PPARGC1AQ9UBK2 OR51K1P-201ENST00000510214 950 ntBASIC4.44□□□□□ -1.7
PPARGC1AQ9UBK2 AC104136.1-201ENST00000512969 394 ntBASIC4.44□□□□□ -1.7
PPARGC1AQ9UBK2 RN7SKP24-201ENST00000515888 284 ntBASIC4.44□□□□□ -1.7
PPARGC1AQ9UBK2 SNORA14.1-201ENST00000516113 141 ntBASIC4.44□□□□□ -1.7
PPARGC1AQ9UBK2 Y_RNA.711-201ENST00000516993 102 ntBASIC4.44□□□□□ -1.7
PPARGC1AQ9UBK2 APOOP3-201ENST00000536787 586 ntBASIC4.44□□□□□ -1.7
PPARGC1AQ9UBK2 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC4.44□□□□□ -1.7
PPARGC1AQ9UBK2 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.44□□□□□ -1.7
PPARGC1AQ9UBK2 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms