Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 AP000676.3-201ENST00000623299 569 ntBASIC2.37□□□□□ -2.03
CLCF1Q9UBD9 MIR6733-201ENST00000635723 61 ntBASIC2.37□□□□□ -2.03
CLCF1Q9UBD9 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
CLCF1Q9UBD9 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.37□□□□□ -2.03
CLCF1Q9UBD9 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.37□□□□□ -2.03
CLCF1Q9UBD9 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.37□□□□□ -2.03
CLCF1Q9UBD9 AC007785.2-201ENST00000598627 1916 ntBASIC2.36□□□□□ -2.03
CLCF1Q9UBD9 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
CLCF1Q9UBD9 FTLP6-201ENST00000355274 422 ntBASIC2.36□□□□□ -2.03
CLCF1Q9UBD9 MIR449A-201ENST00000362113 91 ntBASIC2.36□□□□□ -2.03
CLCF1Q9UBD9 Y_RNA.18-201ENST00000362461 102 ntBASIC2.36□□□□□ -2.03
CLCF1Q9UBD9 U3.12-201ENST00000364498 214 ntBASIC2.36□□□□□ -2.03
CLCF1Q9UBD9 MIR325-201ENST00000385260 98 ntBASIC2.36□□□□□ -2.03
CLCF1Q9UBD9 AL512633.1-201ENST00000399931 655 ntBASIC2.36□□□□□ -2.03
CLCF1Q9UBD9 SNORD88.1-201ENST00000408684 91 ntBASIC2.36□□□□□ -2.03
CLCF1Q9UBD9 SAR1AP4-201ENST00000429225 591 ntBASIC2.36□□□□□ -2.03
CLCF1Q9UBD9 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC2.36□□□□□ -2.03
CLCF1Q9UBD9 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC2.36□□□□□ -2.03
CLCF1Q9UBD9 AL512844.2-201ENST00000433990 593 ntBASIC2.36□□□□□ -2.03
CLCF1Q9UBD9 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC2.36□□□□□ -2.03
CLCF1Q9UBD9 TPT1P14-201ENST00000448018 505 ntBASIC2.36□□□□□ -2.03
CLCF1Q9UBD9 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.36□□□□□ -2.03
CLCF1Q9UBD9 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC2.36□□□□□ -2.03
CLCF1Q9UBD9 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC2.36□□□□□ -2.03
CLCF1Q9UBD9 OR6K1P-201ENST00000456766 971 ntBASIC2.36□□□□□ -2.03
CLCF1Q9UBD9 AC092798.1-201ENST00000458542 409 ntBASIC2.36□□□□□ -2.03
CLCF1Q9UBD9 AC126389.1-201ENST00000477436 290 ntBASIC2.36□□□□□ -2.03
CLCF1Q9UBD9 AC098799.2-201ENST00000509466 868 ntBASIC2.36□□□□□ -2.03
CLCF1Q9UBD9 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC2.36□□□□□ -2.03
CLCF1Q9UBD9 AC023538.1-201ENST00000534576 736 ntBASIC2.36□□□□□ -2.03
CLCF1Q9UBD9 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC2.36□□□□□ -2.03
CLCF1Q9UBD9 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC2.36□□□□□ -2.03
CLCF1Q9UBD9 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
CLCF1Q9UBD9 AMZ2P1-203ENST00000565833 850 ntBASIC2.36□□□□□ -2.03
CLCF1Q9UBD9 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC2.36□□□□□ -2.03
CLCF1Q9UBD9 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC2.36□□□□□ -2.03
CLCF1Q9UBD9 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC2.36□□□□□ -2.03
CLCF1Q9UBD9 MIR544B-201ENST00000582372 78 ntBASIC2.36□□□□□ -2.03
CLCF1Q9UBD9 AC004696.1-201ENST00000614345 607 ntBASIC2.36□□□□□ -2.03
CLCF1Q9UBD9 AC023510.2-201ENST00000622162 746 ntBASIC2.36□□□□□ -2.03
CLCF1Q9UBD9 AC007490.1-201ENST00000624321 703 ntBASIC2.36□□□□□ -2.03
CLCF1Q9UBD9 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC2.36□□□□□ -2.03
CLCF1Q9UBD9 AL049641.1-201ENST00000441055 1948 ntBASIC2.36□□□□□ -2.03
CLCF1Q9UBD9 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.35□□□□□ -2.03
CLCF1Q9UBD9 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.35□□□□□ -2.03
CLCF1Q9UBD9 MTND5P33-201ENST00000571250 1450 ntBASIC2.35□□□□□ -2.03
CLCF1Q9UBD9 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
CLCF1Q9UBD9 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.35□□□□□ -2.03
CLCF1Q9UBD9 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
CLCF1Q9UBD9 RNU6-741P-201ENST00000383889 107 ntBASIC2.35□□□□□ -2.03
CLCF1Q9UBD9 RNU6-1027P-201ENST00000383998 107 ntBASIC2.35□□□□□ -2.03
CLCF1Q9UBD9 RNU6-1200P-201ENST00000384162 107 ntBASIC2.35□□□□□ -2.03
CLCF1Q9UBD9 AL109755.1-201ENST00000401791 649 ntBASIC2.35□□□□□ -2.03
CLCF1Q9UBD9 HMGB1P11-201ENST00000413899 637 ntBASIC2.35□□□□□ -2.03
CLCF1Q9UBD9 HIGD1AP15-201ENST00000416198 280 ntBASIC2.35□□□□□ -2.03
CLCF1Q9UBD9 UBE2FP1-201ENST00000416536 447 ntBASIC2.35□□□□□ -2.03
CLCF1Q9UBD9 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.35□□□□□ -2.03
CLCF1Q9UBD9 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC2.35□□□□□ -2.03
CLCF1Q9UBD9 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC2.35□□□□□ -2.03
CLCF1Q9UBD9 AL445669.1-201ENST00000426743 755 ntBASIC2.35□□□□□ -2.03
CLCF1Q9UBD9 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.35□□□□□ -2.03
CLCF1Q9UBD9 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC2.35□□□□□ -2.03
CLCF1Q9UBD9 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.35□□□□□ -2.03
CLCF1Q9UBD9 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.35□□□□□ -2.03
CLCF1Q9UBD9 CBWD4P-201ENST00000445695 655 ntBASIC2.35□□□□□ -2.03
CLCF1Q9UBD9 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC2.35□□□□□ -2.03
CLCF1Q9UBD9 RPS15AP36-201ENST00000492022 382 ntBASIC2.35□□□□□ -2.03
CLCF1Q9UBD9 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
CLCF1Q9UBD9 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.35□□□□□ -2.03
CLCF1Q9UBD9 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.35□□□□□ -2.03
CLCF1Q9UBD9 CDC42P4-201ENST00000510507 563 ntBASIC2.35□□□□□ -2.03
CLCF1Q9UBD9 AC114781.4-201ENST00000513707 639 ntBASIC2.35□□□□□ -2.03
CLCF1Q9UBD9 AC118465.1-201ENST00000513820 1271 ntBASIC2.35□□□□□ -2.03
CLCF1Q9UBD9 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC2.35□□□□□ -2.03
CLCF1Q9UBD9 RNA5SP76-201ENST00000516277 87 ntBASIC2.35□□□□□ -2.03
CLCF1Q9UBD9 MRPS36P3-201ENST00000519284 130 ntBASIC2.35□□□□□ -2.03
CLCF1Q9UBD9 AP002748.2-201ENST00000528671 348 ntBASIC2.35□□□□□ -2.03
CLCF1Q9UBD9 AP003461.1-201ENST00000528866 78 ntBASIC2.35□□□□□ -2.03
CLCF1Q9UBD9 AP000857.1-201ENST00000532151 543 ntBASIC2.35□□□□□ -2.03
CLCF1Q9UBD9 AC013828.2-201ENST00000532487 235 ntBASIC2.35□□□□□ -2.03
CLCF1Q9UBD9 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
CLCF1Q9UBD9 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.35□□□□□ -2.03
CLCF1Q9UBD9 MTND1P24-201ENST00000552175 861 ntBASIC2.35□□□□□ -2.03
CLCF1Q9UBD9 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC2.35□□□□□ -2.03
CLCF1Q9UBD9 MEG8-218ENST00000556720 456 ntTSL 3 BASIC2.35□□□□□ -2.03
CLCF1Q9UBD9 AC234778.2-201ENST00000566241 354 ntBASIC2.35□□□□□ -2.03
CLCF1Q9UBD9 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.35□□□□□ -2.03
CLCF1Q9UBD9 AC005951.2-201ENST00000576282 495 ntBASIC2.35□□□□□ -2.03
CLCF1Q9UBD9 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
CLCF1Q9UBD9 MIR4635-201ENST00000583759 79 ntBASIC2.35□□□□□ -2.03
CLCF1Q9UBD9 AF038458.1-201ENST00000588406 262 ntBASIC2.35□□□□□ -2.03
CLCF1Q9UBD9 TPMTP1-201ENST00000592307 737 ntBASIC2.35□□□□□ -2.03
CLCF1Q9UBD9 AC023043.3-201ENST00000593113 385 ntBASIC2.35□□□□□ -2.03
CLCF1Q9UBD9 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.35□□□□□ -2.03
CLCF1Q9UBD9 AC022022.2-201ENST00000602989 360 ntBASIC2.35□□□□□ -2.03
CLCF1Q9UBD9 NUTF2P8-201ENST00000604593 363 ntBASIC2.35□□□□□ -2.03
CLCF1Q9UBD9 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
CLCF1Q9UBD9 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC2.35□□□□□ -2.03
CLCF1Q9UBD9 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.35□□□□□ -2.03
CLCF1Q9UBD9 AC004908.2-201ENST00000609090 574 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms