Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 RNU6-750P-201ENST00000390946 107 ntBASIC2.07□□□□□ -2.08
VAPAQ9P0L0 MIR888-201ENST00000401186 77 ntBASIC2.07□□□□□ -2.08
VAPAQ9P0L0 AL355497.1-201ENST00000406262 551 ntBASIC2.07□□□□□ -2.08
VAPAQ9P0L0 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC2.07□□□□□ -2.08
VAPAQ9P0L0 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.07□□□□□ -2.08
VAPAQ9P0L0 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC2.07□□□□□ -2.08
VAPAQ9P0L0 MTND4P6-201ENST00000438297 472 ntBASIC2.07□□□□□ -2.08
VAPAQ9P0L0 SDR42E1P3-201ENST00000438345 502 ntBASIC2.07□□□□□ -2.08
VAPAQ9P0L0 PTGES3P1-201ENST00000439531 483 ntBASIC2.07□□□□□ -2.08
VAPAQ9P0L0 AL591719.1-201ENST00000444669 744 ntBASIC2.07□□□□□ -2.08
VAPAQ9P0L0 ANKRD26P4-201ENST00000455755 950 ntBASIC2.07□□□□□ -2.08
VAPAQ9P0L0 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC2.07□□□□□ -2.08
VAPAQ9P0L0 RNU7-136P-201ENST00000458819 69 ntBASIC2.07□□□□□ -2.08
VAPAQ9P0L0 AC108734.3-201ENST00000481241 1165 ntBASIC2.07□□□□□ -2.08
VAPAQ9P0L0 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC2.07□□□□□ -2.08
VAPAQ9P0L0 AC098591.2-201ENST00000510152 315 ntBASIC2.07□□□□□ -2.08
VAPAQ9P0L0 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC2.07□□□□□ -2.08
VAPAQ9P0L0 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC2.07□□□□□ -2.08
VAPAQ9P0L0 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
VAPAQ9P0L0 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC2.07□□□□□ -2.08
VAPAQ9P0L0 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC2.07□□□□□ -2.08
VAPAQ9P0L0 BBIP1P1-201ENST00000602999 279 ntBASIC2.07□□□□□ -2.08
VAPAQ9P0L0 AP000403.1-201ENST00000603349 851 ntBASIC2.07□□□□□ -2.08
VAPAQ9P0L0 AC021749.1-201ENST00000604322 607 ntBASIC2.07□□□□□ -2.08
VAPAQ9P0L0 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.07□□□□□ -2.08
VAPAQ9P0L0 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.07□□□□□ -2.08
VAPAQ9P0L0 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
VAPAQ9P0L0 AL138713.1-201ENST00000624026 2130 ntBASIC2.07□□□□□ -2.08
VAPAQ9P0L0 GMFB-210ENST00000628554 639 ntTSL 4 BASIC2.07□□□□□ -2.08
VAPAQ9P0L0 AP000553.5-201ENST00000641933 54 ntBASIC2.07□□□□□ -2.08
VAPAQ9P0L0 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.07□□□□□ -2.08
VAPAQ9P0L0 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.06□□□□□ -2.08
VAPAQ9P0L0 AC004944.1-201ENST00000517807 3059 ntBASIC2.06□□□□□ -2.08
VAPAQ9P0L0 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
VAPAQ9P0L0 ANKRD36P1-201ENST00000344424 659 ntBASIC2.06□□□□□ -2.08
VAPAQ9P0L0 RNU6-97P-201ENST00000363387 104 ntBASIC2.06□□□□□ -2.08
VAPAQ9P0L0 SNORA51.11-201ENST00000384442 131 ntBASIC2.06□□□□□ -2.08
VAPAQ9P0L0 RNU6-952P-201ENST00000391164 108 ntBASIC2.06□□□□□ -2.08
VAPAQ9P0L0 U3.26-201ENST00000391236 204 ntBASIC2.06□□□□□ -2.08
VAPAQ9P0L0 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
VAPAQ9P0L0 RNU6-920P-201ENST00000410926 92 ntBASIC2.06□□□□□ -2.08
VAPAQ9P0L0 AC096664.2-201ENST00000411843 406 ntBASIC2.06□□□□□ -2.08
VAPAQ9P0L0 TPMTP3-201ENST00000411928 735 ntBASIC2.06□□□□□ -2.08
VAPAQ9P0L0 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.06□□□□□ -2.08
VAPAQ9P0L0 AC007435.1-201ENST00000421086 415 ntBASIC2.06□□□□□ -2.08
VAPAQ9P0L0 MED14P1-201ENST00000430517 648 ntBASIC2.06□□□□□ -2.08
VAPAQ9P0L0 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
VAPAQ9P0L0 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
VAPAQ9P0L0 ARF4P4-201ENST00000439608 520 ntBASIC2.06□□□□□ -2.08
VAPAQ9P0L0 OSTCP8-201ENST00000445117 448 ntBASIC2.06□□□□□ -2.08
VAPAQ9P0L0 NDUFAF4P2-201ENST00000445374 520 ntBASIC2.06□□□□□ -2.08
VAPAQ9P0L0 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC2.06□□□□□ -2.08
VAPAQ9P0L0 AC017099.1-201ENST00000448261 1028 ntBASIC2.06□□□□□ -2.08
VAPAQ9P0L0 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC2.06□□□□□ -2.08
VAPAQ9P0L0 AC079804.2-201ENST00000490376 200 ntBASIC2.06□□□□□ -2.08
VAPAQ9P0L0 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.06□□□□□ -2.08
VAPAQ9P0L0 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC2.06□□□□□ -2.08
VAPAQ9P0L0 AC022447.1-201ENST00000515358 464 ntBASIC2.06□□□□□ -2.08
VAPAQ9P0L0 BTF3P12-201ENST00000519620 469 ntBASIC2.06□□□□□ -2.08
VAPAQ9P0L0 DEFB130C-202ENST00000530001 230 ntBASIC2.06□□□□□ -2.08
VAPAQ9P0L0 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC2.06□□□□□ -2.08
VAPAQ9P0L0 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC2.06□□□□□ -2.08
VAPAQ9P0L0 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.06□□□□□ -2.08
VAPAQ9P0L0 MIR3912-201ENST00000577566 105 ntBASIC2.06□□□□□ -2.08
VAPAQ9P0L0 LRRC37A5P-203ENST00000580181 585 ntBASIC2.06□□□□□ -2.08
VAPAQ9P0L0 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC2.06□□□□□ -2.08
VAPAQ9P0L0 MTATP6P2-201ENST00000603319 678 ntBASIC2.06□□□□□ -2.08
VAPAQ9P0L0 AC069545.1-201ENST00000605671 358 ntBASIC2.06□□□□□ -2.08
VAPAQ9P0L0 SNORD14A-201ENST00000606526 91 ntBASIC2.06□□□□□ -2.08
VAPAQ9P0L0 AC009090.3-201ENST00000616553 565 ntBASIC2.06□□□□□ -2.08
VAPAQ9P0L0 AL357080.1-201ENST00000617394 239 ntBASIC2.06□□□□□ -2.08
VAPAQ9P0L0 CTSLP2-204ENST00000629029 392 ntBASIC2.06□□□□□ -2.08
VAPAQ9P0L0 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.06□□□□□ -2.08
VAPAQ9P0L0 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
VAPAQ9P0L0 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
VAPAQ9P0L0 U3.12-201ENST00000364498 214 ntBASIC2.05□□□□□ -2.08
VAPAQ9P0L0 RNU4-52P-201ENST00000384209 138 ntBASIC2.05□□□□□ -2.08
VAPAQ9P0L0 RNU6-301P-201ENST00000384277 107 ntBASIC2.05□□□□□ -2.08
VAPAQ9P0L0 MIR218-1-201ENST00000384999 110 ntBASIC2.05□□□□□ -2.08
VAPAQ9P0L0 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC2.05□□□□□ -2.08
VAPAQ9P0L0 AC005005.2-201ENST00000420779 380 ntBASIC2.05□□□□□ -2.08
VAPAQ9P0L0 MRPS36P1-201ENST00000421291 307 ntBASIC2.05□□□□□ -2.08
VAPAQ9P0L0 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC2.05□□□□□ -2.08
VAPAQ9P0L0 HMGB1P9-201ENST00000429856 646 ntBASIC2.05□□□□□ -2.08
VAPAQ9P0L0 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.05□□□□□ -2.08
VAPAQ9P0L0 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.05□□□□□ -2.08
VAPAQ9P0L0 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
VAPAQ9P0L0 ARPC3P5-201ENST00000448802 534 ntBASIC2.05□□□□□ -2.08
VAPAQ9P0L0 RPL23AP7-203ENST00000449021 469 ntBASIC2.05□□□□□ -2.08
VAPAQ9P0L0 AL118520.1-201ENST00000450770 291 ntBASIC2.05□□□□□ -2.08
VAPAQ9P0L0 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.05□□□□□ -2.08
VAPAQ9P0L0 RNU6-717P-201ENST00000459076 104 ntBASIC2.05□□□□□ -2.08
VAPAQ9P0L0 AC090255.1-201ENST00000495779 349 ntBASIC2.05□□□□□ -2.08
VAPAQ9P0L0 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.05□□□□□ -2.08
VAPAQ9P0L0 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.05□□□□□ -2.08
VAPAQ9P0L0 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC2.05□□□□□ -2.08
VAPAQ9P0L0 AC087894.1-201ENST00000538359 518 ntBASIC2.05□□□□□ -2.08
VAPAQ9P0L0 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.05□□□□□ -2.08
VAPAQ9P0L0 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.05□□□□□ -2.08
VAPAQ9P0L0 RPS3AP23-202ENST00000574601 686 ntBASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 91 ms