Protein–RNA interactions for Protein: Q9NTJ3

SMC4, Structural maintenance of chromosomes protein 4, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4Q9NTJ3 AL049641.1-201ENST00000441055 1948 ntBASIC3.72□□□□□ -1.81
SMC4Q9NTJ3 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
SMC4Q9NTJ3 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
SMC4Q9NTJ3 ANKRD20A17P-201ENST00000511745 1330 ntBASIC3.71□□□□□ -1.81
SMC4Q9NTJ3 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
SMC4Q9NTJ3 MTND5P19-201ENST00000424872 1794 ntBASIC3.71□□□□□ -1.81
SMC4Q9NTJ3 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
SMC4Q9NTJ3 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
SMC4Q9NTJ3 SNORA14A-201ENST00000364773 135 ntBASIC3.71□□□□□ -1.82
SMC4Q9NTJ3 RNU1-140P-201ENST00000365040 165 ntBASIC3.71□□□□□ -1.82
SMC4Q9NTJ3 RNU1-39P-201ENST00000383897 165 ntBASIC3.71□□□□□ -1.82
SMC4Q9NTJ3 MIR634-201ENST00000385208 97 ntBASIC3.71□□□□□ -1.82
SMC4Q9NTJ3 NDUFB4P4-201ENST00000404822 243 ntBASIC3.71□□□□□ -1.82
SMC4Q9NTJ3 SNORA11.2-201ENST00000408318 127 ntBASIC3.71□□□□□ -1.82
SMC4Q9NTJ3 RN7SKP140-201ENST00000411196 284 ntBASIC3.71□□□□□ -1.82
SMC4Q9NTJ3 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC3.71□□□□□ -1.82
SMC4Q9NTJ3 AL390023.1-201ENST00000428836 262 ntBASIC3.71□□□□□ -1.82
SMC4Q9NTJ3 AC092573.2-201ENST00000434546 243 ntBASIC3.71□□□□□ -1.82
SMC4Q9NTJ3 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC3.71□□□□□ -1.82
SMC4Q9NTJ3 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC3.71□□□□□ -1.82
SMC4Q9NTJ3 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC3.71□□□□□ -1.82
SMC4Q9NTJ3 RPS26P21-201ENST00000475397 348 ntBASIC3.71□□□□□ -1.82
SMC4Q9NTJ3 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC3.71□□□□□ -1.82
SMC4Q9NTJ3 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.71□□□□□ -1.82
SMC4Q9NTJ3 TTC39CP1-201ENST00000512513 755 ntBASIC3.71□□□□□ -1.82
SMC4Q9NTJ3 SCGB1D5P-201ENST00000515134 247 ntBASIC3.71□□□□□ -1.82
SMC4Q9NTJ3 AC022080.3-201ENST00000544433 482 ntBASIC3.71□□□□□ -1.82
SMC4Q9NTJ3 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC3.71□□□□□ -1.82
SMC4Q9NTJ3 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC3.71□□□□□ -1.82
SMC4Q9NTJ3 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC3.71□□□□□ -1.82
SMC4Q9NTJ3 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC3.71□□□□□ -1.82
SMC4Q9NTJ3 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.71□□□□□ -1.82
SMC4Q9NTJ3 AMZ2P1-203ENST00000565833 850 ntBASIC3.71□□□□□ -1.82
SMC4Q9NTJ3 HMGB1P6-201ENST00000569046 646 ntBASIC3.71□□□□□ -1.82
SMC4Q9NTJ3 AC083760.1-201ENST00000589621 670 ntBASIC3.71□□□□□ -1.82
SMC4Q9NTJ3 AC078899.3-201ENST00000599065 212 ntBASIC3.71□□□□□ -1.82
SMC4Q9NTJ3 Z99497.2-201ENST00000603634 310 ntBASIC3.71□□□□□ -1.82
SMC4Q9NTJ3 AC103710.1-201ENST00000610003 901 ntBASIC3.71□□□□□ -1.82
SMC4Q9NTJ3 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.71□□□□□ -1.82
SMC4Q9NTJ3 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.71□□□□□ -1.82
SMC4Q9NTJ3 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
SMC4Q9NTJ3 API5P2-201ENST00000397055 1498 ntBASIC3.71□□□□□ -1.82
SMC4Q9NTJ3 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
SMC4Q9NTJ3 AC010680.1-201ENST00000590024 3590 ntBASIC3.71□□□□□ -1.82
SMC4Q9NTJ3 AC103988.1-201ENST00000566382 2177 ntBASIC3.7□□□□□ -1.82
SMC4Q9NTJ3 FAM35BP-202ENST00000497389 3337 ntBASIC3.7□□□□□ -1.82
SMC4Q9NTJ3 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SMC4Q9NTJ3 RNU1-35P-201ENST00000362782 153 ntBASIC3.7□□□□□ -1.82
SMC4Q9NTJ3 MIR128-1-201ENST00000384921 82 ntBASIC3.7□□□□□ -1.82
SMC4Q9NTJ3 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
SMC4Q9NTJ3 SNORD115.1-201ENST00000391109 76 ntBASIC3.7□□□□□ -1.82
SMC4Q9NTJ3 SAR1AP2-201ENST00000392696 594 ntBASIC3.7□□□□□ -1.82
SMC4Q9NTJ3 RPS20P2-201ENST00000402520 389 ntBASIC3.7□□□□□ -1.82
SMC4Q9NTJ3 AL021407.1-201ENST00000404531 386 ntBASIC3.7□□□□□ -1.82
SMC4Q9NTJ3 RPL17P12-201ENST00000413391 526 ntBASIC3.7□□□□□ -1.82
SMC4Q9NTJ3 RPL21P24-201ENST00000413752 448 ntBASIC3.7□□□□□ -1.82
SMC4Q9NTJ3 Z85995.1-201ENST00000415547 335 ntBASIC3.7□□□□□ -1.82
SMC4Q9NTJ3 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC3.7□□□□□ -1.82
SMC4Q9NTJ3 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC3.7□□□□□ -1.82
SMC4Q9NTJ3 AL353777.1-201ENST00000425552 326 ntBASIC3.7□□□□□ -1.82
SMC4Q9NTJ3 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.7□□□□□ -1.82
SMC4Q9NTJ3 S100A11P2-201ENST00000467589 312 ntBASIC3.7□□□□□ -1.82
SMC4Q9NTJ3 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SMC4Q9NTJ3 AC010486.3-201ENST00000511602 785 ntBASIC3.7□□□□□ -1.82
SMC4Q9NTJ3 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC3.7□□□□□ -1.82
SMC4Q9NTJ3 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC3.7□□□□□ -1.82
SMC4Q9NTJ3 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.7□□□□□ -1.82
SMC4Q9NTJ3 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.7□□□□□ -1.82
SMC4Q9NTJ3 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC3.7□□□□□ -1.82
SMC4Q9NTJ3 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC3.7□□□□□ -1.82
SMC4Q9NTJ3 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.7□□□□□ -1.82
SMC4Q9NTJ3 AC091931.1-201ENST00000623488 728 ntBASIC3.7□□□□□ -1.82
SMC4Q9NTJ3 AC093591.3-201ENST00000634516 308 ntBASIC3.7□□□□□ -1.82
SMC4Q9NTJ3 OR5H6-203ENST00000642105 978 ntBASIC3.7□□□□□ -1.82
SMC4Q9NTJ3 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SMC4Q9NTJ3 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
SMC4Q9NTJ3 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.69□□□□□ -1.82
SMC4Q9NTJ3 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
SMC4Q9NTJ3 RNU5F-6P-201ENST00000362979 116 ntBASIC3.69□□□□□ -1.82
SMC4Q9NTJ3 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
SMC4Q9NTJ3 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.69□□□□□ -1.82
SMC4Q9NTJ3 CCNG1P1-201ENST00000406783 885 ntBASIC3.69□□□□□ -1.82
SMC4Q9NTJ3 AC096664.2-201ENST00000411843 406 ntBASIC3.69□□□□□ -1.82
SMC4Q9NTJ3 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.69□□□□□ -1.82
SMC4Q9NTJ3 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.69□□□□□ -1.82
SMC4Q9NTJ3 AC093151.1-201ENST00000427711 313 ntBASIC3.69□□□□□ -1.82
SMC4Q9NTJ3 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC3.69□□□□□ -1.82
SMC4Q9NTJ3 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.69□□□□□ -1.82
SMC4Q9NTJ3 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC3.69□□□□□ -1.82
SMC4Q9NTJ3 AC093156.1-201ENST00000440382 670 ntBASIC3.69□□□□□ -1.82
SMC4Q9NTJ3 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC3.69□□□□□ -1.82
SMC4Q9NTJ3 AC140076.1-201ENST00000449897 361 ntBASIC3.69□□□□□ -1.82
SMC4Q9NTJ3 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.69□□□□□ -1.82
SMC4Q9NTJ3 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC3.69□□□□□ -1.82
SMC4Q9NTJ3 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.69□□□□□ -1.82
SMC4Q9NTJ3 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.69□□□□□ -1.82
SMC4Q9NTJ3 AC116347.2-201ENST00000514912 523 ntBASIC3.69□□□□□ -1.82
SMC4Q9NTJ3 RN7SKP282-201ENST00000516824 299 ntBASIC3.69□□□□□ -1.82
SMC4Q9NTJ3 ATP5F1P5-201ENST00000526403 760 ntBASIC3.69□□□□□ -1.82
SMC4Q9NTJ3 DEFB108A-201ENST00000530110 222 ntBASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms