Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC0.98□□□□□ -2.25
CDC42SE2Q9NRR3 SNORA67.6-201ENST00000391093 99 ntBASIC0.98□□□□□ -2.25
CDC42SE2Q9NRR3 SNRPEP2-201ENST00000397592 279 ntBASIC0.98□□□□□ -2.25
CDC42SE2Q9NRR3 AL035405.1-201ENST00000400795 710 ntBASIC0.98□□□□□ -2.25
CDC42SE2Q9NRR3 AL033519.2-201ENST00000403958 392 ntBASIC0.98□□□□□ -2.25
CDC42SE2Q9NRR3 MIR1323-201ENST00000408090 73 ntBASIC0.98□□□□□ -2.25
CDC42SE2Q9NRR3 RPS3AP44-201ENST00000425466 790 ntBASIC0.98□□□□□ -2.25
CDC42SE2Q9NRR3 AL354695.1-201ENST00000427935 228 ntBASIC0.98□□□□□ -2.25
CDC42SE2Q9NRR3 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC0.98□□□□□ -2.25
CDC42SE2Q9NRR3 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC0.98□□□□□ -2.25
CDC42SE2Q9NRR3 SNRPGP13-201ENST00000442212 177 ntBASIC0.98□□□□□ -2.25
CDC42SE2Q9NRR3 AC004865.1-201ENST00000442276 1003 ntBASIC0.98□□□□□ -2.25
CDC42SE2Q9NRR3 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC0.98□□□□□ -2.25
CDC42SE2Q9NRR3 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC0.98□□□□□ -2.25
CDC42SE2Q9NRR3 RPL12P25-201ENST00000455592 494 ntBASIC0.98□□□□□ -2.25
CDC42SE2Q9NRR3 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC0.98□□□□□ -2.25
CDC42SE2Q9NRR3 AC008481.1-201ENST00000463278 396 ntBASIC0.98□□□□□ -2.25
CDC42SE2Q9NRR3 AC104164.3-201ENST00000467363 1258 ntBASIC0.98□□□□□ -2.25
CDC42SE2Q9NRR3 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC0.98□□□□□ -2.25
CDC42SE2Q9NRR3 AC008526.1-201ENST00000509149 338 ntBASIC0.98□□□□□ -2.25
CDC42SE2Q9NRR3 RNA5SP61-201ENST00000516453 100 ntBASIC0.98□□□□□ -2.25
CDC42SE2Q9NRR3 CASP1-212ENST00000531166 300 ntTSL 5 BASIC0.98□□□□□ -2.25
CDC42SE2Q9NRR3 GNAI2P1-201ENST00000541815 315 ntBASIC0.98□□□□□ -2.25
CDC42SE2Q9NRR3 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC0.98□□□□□ -2.25
CDC42SE2Q9NRR3 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC0.98□□□□□ -2.25
CDC42SE2Q9NRR3 AL160236.1-201ENST00000556317 195 ntBASIC0.98□□□□□ -2.25
CDC42SE2Q9NRR3 AC055876.5-201ENST00000605667 259 ntBASIC0.98□□□□□ -2.25
CDC42SE2Q9NRR3 AL021997.1-201ENST00000605757 193 ntBASIC0.98□□□□□ -2.25
CDC42SE2Q9NRR3 AC110792.4-201ENST00000609843 298 ntBASIC0.98□□□□□ -2.25
CDC42SE2Q9NRR3 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC0.98□□□□□ -2.25
CDC42SE2Q9NRR3 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
CDC42SE2Q9NRR3 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC0.98□□□□□ -2.25
CDC42SE2Q9NRR3 MIR7157-201ENST00000635801 60 ntBASIC0.98□□□□□ -2.25
CDC42SE2Q9NRR3 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC0.98□□□□□ -2.25
CDC42SE2Q9NRR3 AK9-203ENST00000368948 2478 ntTSL 5 BASIC0.98□□□□□ -2.25
CDC42SE2Q9NRR3 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC0.98□□□□□ -2.25
CDC42SE2Q9NRR3 SNORA26.9-201ENST00000391322 122 ntBASIC0.97□□□□□ -2.25
CDC42SE2Q9NRR3 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
CDC42SE2Q9NRR3 MIR1290-201ENST00000408735 78 ntBASIC0.97□□□□□ -2.25
CDC42SE2Q9NRR3 AC074117.2-201ENST00000417130 397 ntBASIC0.97□□□□□ -2.25
CDC42SE2Q9NRR3 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC0.97□□□□□ -2.25
CDC42SE2Q9NRR3 AC118469.1-201ENST00000442943 488 ntBASIC0.97□□□□□ -2.25
CDC42SE2Q9NRR3 AC007677.1-201ENST00000445757 515 ntBASIC0.97□□□□□ -2.25
CDC42SE2Q9NRR3 AC005410.1-202ENST00000460347 485 ntBASIC0.97□□□□□ -2.25
CDC42SE2Q9NRR3 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
CDC42SE2Q9NRR3 TPT1P8-201ENST00000510120 555 ntBASIC0.97□□□□□ -2.25
CDC42SE2Q9NRR3 AL359273.1-201ENST00000510918 627 ntBASIC0.97□□□□□ -2.25
CDC42SE2Q9NRR3 RNU1-41P-201ENST00000516161 162 ntBASIC0.97□□□□□ -2.25
CDC42SE2Q9NRR3 RNU1-48P-201ENST00000516400 162 ntBASIC0.97□□□□□ -2.25
CDC42SE2Q9NRR3 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC0.97□□□□□ -2.25
CDC42SE2Q9NRR3 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC0.97□□□□□ -2.25
CDC42SE2Q9NRR3 MIR3126-201ENST00000577443 74 ntBASIC0.97□□□□□ -2.25
CDC42SE2Q9NRR3 AC068276.1-201ENST00000605793 379 ntBASIC0.97□□□□□ -2.25
CDC42SE2Q9NRR3 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC0.97□□□□□ -2.25
CDC42SE2Q9NRR3 U4atac.1-201ENST00000618345 95 ntBASIC0.97□□□□□ -2.25
CDC42SE2Q9NRR3 AC091304.6-201ENST00000619761 202 ntBASIC0.97□□□□□ -2.25
CDC42SE2Q9NRR3 AC040168.1-201ENST00000623594 991 ntBASIC0.97□□□□□ -2.25
CDC42SE2Q9NRR3 AC068057.2-201ENST00000624047 895 ntBASIC0.97□□□□□ -2.25
CDC42SE2Q9NRR3 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC0.97□□□□□ -2.25
CDC42SE2Q9NRR3 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC0.97□□□□□ -2.25
CDC42SE2Q9NRR3 ANKRD20A9P-201ENST00000457997 2978 ntBASIC0.97□□□□□ -2.25
CDC42SE2Q9NRR3 AL161722.3-201ENST00000605789 2983 ntBASIC0.97□□□□□ -2.25
CDC42SE2Q9NRR3 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC0.97□□□□□ -2.25
CDC42SE2Q9NRR3 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC0.96□□□□□ -2.25
CDC42SE2Q9NRR3 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC0.96□□□□□ -2.26
CDC42SE2Q9NRR3 RNU6-60P-201ENST00000364792 103 ntBASIC0.96□□□□□ -2.26
CDC42SE2Q9NRR3 RNU6-1083P-201ENST00000384022 107 ntBASIC0.96□□□□□ -2.26
CDC42SE2Q9NRR3 MIR218-1-201ENST00000384999 110 ntBASIC0.96□□□□□ -2.26
CDC42SE2Q9NRR3 MIR758-201ENST00000390227 88 ntBASIC0.96□□□□□ -2.26
CDC42SE2Q9NRR3 NPM1P10-201ENST00000398310 865 ntBASIC0.96□□□□□ -2.26
CDC42SE2Q9NRR3 AL589655.1-201ENST00000405398 482 ntBASIC0.96□□□□□ -2.26
CDC42SE2Q9NRR3 EDDM3CP-201ENST00000415977 425 ntBASIC0.96□□□□□ -2.26
CDC42SE2Q9NRR3 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC0.96□□□□□ -2.26
CDC42SE2Q9NRR3 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC0.96□□□□□ -2.26
CDC42SE2Q9NRR3 MTCO3P46-201ENST00000425787 232 ntBASIC0.96□□□□□ -2.26
CDC42SE2Q9NRR3 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC0.96□□□□□ -2.26
CDC42SE2Q9NRR3 MICF-203ENST00000432679 129 ntBASIC0.96□□□□□ -2.26
CDC42SE2Q9NRR3 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC0.96□□□□□ -2.26
CDC42SE2Q9NRR3 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC0.96□□□□□ -2.26
CDC42SE2Q9NRR3 MTCYBP35-201ENST00000503630 1137 ntBASIC0.96□□□□□ -2.26
CDC42SE2Q9NRR3 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC0.96□□□□□ -2.26
CDC42SE2Q9NRR3 AC109464.2-201ENST00000510242 943 ntBASIC0.96□□□□□ -2.26
CDC42SE2Q9NRR3 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC0.96□□□□□ -2.26
CDC42SE2Q9NRR3 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC0.96□□□□□ -2.26
CDC42SE2Q9NRR3 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC0.96□□□□□ -2.26
CDC42SE2Q9NRR3 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC0.96□□□□□ -2.26
CDC42SE2Q9NRR3 AC084033.1-201ENST00000550830 633 ntBASIC0.96□□□□□ -2.26
CDC42SE2Q9NRR3 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC0.96□□□□□ -2.26
CDC42SE2Q9NRR3 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC0.96□□□□□ -2.26
CDC42SE2Q9NRR3 AL078605.1-201ENST00000603529 500 ntBASIC0.96□□□□□ -2.26
CDC42SE2Q9NRR3 AL035411.2-201ENST00000604022 421 ntBASIC0.96□□□□□ -2.26
CDC42SE2Q9NRR3 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC0.96□□□□□ -2.26
CDC42SE2Q9NRR3 AC026634.1-201ENST00000634369 198 ntBASIC0.96□□□□□ -2.26
CDC42SE2Q9NRR3 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC0.96□□□□□ -2.26
CDC42SE2Q9NRR3 AL356473.1-201ENST00000406203 1408 ntBASIC0.96□□□□□ -2.26
CDC42SE2Q9NRR3 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC0.96□□□□□ -2.26
CDC42SE2Q9NRR3 ZNF736P3Y-201ENST00000428264 1465 ntBASIC0.95□□□□□ -2.26
CDC42SE2Q9NRR3 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC0.95□□□□□ -2.26
CDC42SE2Q9NRR3 RNU1-72P-201ENST00000362976 153 ntBASIC0.95□□□□□ -2.26
CDC42SE2Q9NRR3 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC0.95□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms