Protein–RNA interactions for Protein: Q9NRQ5

SMCO4, Single-pass membrane and coiled-coil domain-containing protein 4, humanhuman

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4Q9NRQ5 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC0.81□□□□□ -2.28
SMCO4Q9NRQ5 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC0.81□□□□□ -2.28
SMCO4Q9NRQ5 LTV1P1-201ENST00000510683 1237 ntBASIC0.81□□□□□ -2.28
SMCO4Q9NRQ5 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC0.81□□□□□ -2.28
SMCO4Q9NRQ5 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC0.81□□□□□ -2.28
SMCO4Q9NRQ5 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC0.81□□□□□ -2.28
SMCO4Q9NRQ5 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC0.81□□□□□ -2.28
SMCO4Q9NRQ5 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.81□□□□□ -2.28
SMCO4Q9NRQ5 RPL21P5-201ENST00000554662 472 ntBASIC0.81□□□□□ -2.28
SMCO4Q9NRQ5 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC0.81□□□□□ -2.28
SMCO4Q9NRQ5 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC0.81□□□□□ -2.28
SMCO4Q9NRQ5 AC018638.7-201ENST00000605836 1114 ntBASIC0.81□□□□□ -2.28
SMCO4Q9NRQ5 AC092192.1-201ENST00000633154 1018 ntBASIC0.81□□□□□ -2.28
SMCO4Q9NRQ5 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
SMCO4Q9NRQ5 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC0.8□□□□□ -2.28
SMCO4Q9NRQ5 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC0.8□□□□□ -2.28
SMCO4Q9NRQ5 U8.2-201ENST00000363156 134 ntBASIC0.8□□□□□ -2.28
SMCO4Q9NRQ5 RNU6-374P-201ENST00000364146 108 ntBASIC0.8□□□□□ -2.28
SMCO4Q9NRQ5 SNORA25.8-201ENST00000364831 128 ntBASIC0.8□□□□□ -2.28
SMCO4Q9NRQ5 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
SMCO4Q9NRQ5 FABP12P1-201ENST00000401911 322 ntBASIC0.8□□□□□ -2.28
SMCO4Q9NRQ5 AL356421.1-201ENST00000403255 413 ntBASIC0.8□□□□□ -2.28
SMCO4Q9NRQ5 RPL37P10-201ENST00000412884 288 ntBASIC0.8□□□□□ -2.28
SMCO4Q9NRQ5 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC0.8□□□□□ -2.28
SMCO4Q9NRQ5 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC0.8□□□□□ -2.28
SMCO4Q9NRQ5 AC092634.2-201ENST00000428146 1010 ntBASIC0.8□□□□□ -2.28
SMCO4Q9NRQ5 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC0.8□□□□□ -2.28
SMCO4Q9NRQ5 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC0.8□□□□□ -2.28
SMCO4Q9NRQ5 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC0.8□□□□□ -2.28
SMCO4Q9NRQ5 HMGN2P23-201ENST00000456759 269 ntBASIC0.8□□□□□ -2.28
SMCO4Q9NRQ5 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC0.8□□□□□ -2.28
SMCO4Q9NRQ5 UBL5P3-201ENST00000475112 231 ntBASIC0.8□□□□□ -2.28
SMCO4Q9NRQ5 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC0.8□□□□□ -2.28
SMCO4Q9NRQ5 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC0.8□□□□□ -2.28
SMCO4Q9NRQ5 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
SMCO4Q9NRQ5 RNU5F-8P-201ENST00000515941 111 ntBASIC0.8□□□□□ -2.28
SMCO4Q9NRQ5 RNA5SP137-201ENST00000516833 135 ntBASIC0.8□□□□□ -2.28
SMCO4Q9NRQ5 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC0.8□□□□□ -2.28
SMCO4Q9NRQ5 AC025423.2-201ENST00000537570 439 ntBASIC0.8□□□□□ -2.28
SMCO4Q9NRQ5 AC025918.2-201ENST00000558683 763 ntBASIC0.8□□□□□ -2.28
SMCO4Q9NRQ5 AC074051.3-201ENST00000570238 358 ntBASIC0.8□□□□□ -2.28
SMCO4Q9NRQ5 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC0.8□□□□□ -2.28
SMCO4Q9NRQ5 MIR3683-201ENST00000580847 82 ntBASIC0.8□□□□□ -2.28
SMCO4Q9NRQ5 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC0.8□□□□□ -2.28
SMCO4Q9NRQ5 AC103987.3-201ENST00000582071 292 ntBASIC0.8□□□□□ -2.28
SMCO4Q9NRQ5 MIR3660-201ENST00000584845 100 ntBASIC0.8□□□□□ -2.28
SMCO4Q9NRQ5 AP001542.2-201ENST00000593141 364 ntBASIC0.8□□□□□ -2.28
SMCO4Q9NRQ5 AC011494.1-201ENST00000596454 237 ntBASIC0.8□□□□□ -2.28
SMCO4Q9NRQ5 AC090525.3-201ENST00000605601 189 ntBASIC0.8□□□□□ -2.28
SMCO4Q9NRQ5 DUSP12P1-201ENST00000612874 516 ntBASIC0.8□□□□□ -2.28
SMCO4Q9NRQ5 AL590410.1-201ENST00000617925 333 ntBASIC0.8□□□□□ -2.28
SMCO4Q9NRQ5 U4atac.1-201ENST00000618345 95 ntBASIC0.8□□□□□ -2.28
SMCO4Q9NRQ5 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC0.8□□□□□ -2.28
SMCO4Q9NRQ5 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC0.8□□□□□ -2.28
SMCO4Q9NRQ5 MFSD8-213ENST00000641134 1327 ntBASIC0.8□□□□□ -2.28
SMCO4Q9NRQ5 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC0.8□□□□□ -2.28
SMCO4Q9NRQ5 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC0.8□□□□□ -2.28
SMCO4Q9NRQ5 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC0.8□□□□□ -2.28
SMCO4Q9NRQ5 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC0.79□□□□□ -2.28
SMCO4Q9NRQ5 AC016716.1-201ENST00000265882 708 ntBASIC0.79□□□□□ -2.28
SMCO4Q9NRQ5 MIR30A-201ENST00000385092 71 ntBASIC0.79□□□□□ -2.28
SMCO4Q9NRQ5 MT-TC-201ENST00000387405 66 ntBASIC0.79□□□□□ -2.28
SMCO4Q9NRQ5 FABP5P3-201ENST00000437960 408 ntBASIC0.79□□□□□ -2.28
SMCO4Q9NRQ5 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC0.79□□□□□ -2.28
SMCO4Q9NRQ5 RNU6-775P-201ENST00000459318 96 ntBASIC0.79□□□□□ -2.28
SMCO4Q9NRQ5 AC021382.1-201ENST00000483523 359 ntBASIC0.79□□□□□ -2.28
SMCO4Q9NRQ5 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC0.79□□□□□ -2.28
SMCO4Q9NRQ5 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC0.79□□□□□ -2.28
SMCO4Q9NRQ5 NPM1P52-201ENST00000518264 846 ntBASIC0.79□□□□□ -2.28
SMCO4Q9NRQ5 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC0.79□□□□□ -2.28
SMCO4Q9NRQ5 AC027309.2-201ENST00000520566 192 ntBASIC0.79□□□□□ -2.28
SMCO4Q9NRQ5 OR5B19P-201ENST00000531766 928 ntBASIC0.79□□□□□ -2.28
SMCO4Q9NRQ5 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC0.79□□□□□ -2.28
SMCO4Q9NRQ5 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC0.79□□□□□ -2.28
SMCO4Q9NRQ5 AL161670.1-201ENST00000554348 137 ntBASIC0.79□□□□□ -2.28
SMCO4Q9NRQ5 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC0.79□□□□□ -2.28
SMCO4Q9NRQ5 AC073413.2-201ENST00000604332 360 ntBASIC0.79□□□□□ -2.28
SMCO4Q9NRQ5 AL645939.4-201ENST00000604495 135 ntBASIC0.79□□□□□ -2.28
SMCO4Q9NRQ5 VPS8-228ENST00000628962 207 ntTSL 5 BASIC0.79□□□□□ -2.28
SMCO4Q9NRQ5 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC0.79□□□□□ -2.28
SMCO4Q9NRQ5 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC0.78□□□□□ -2.28
SMCO4Q9NRQ5 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC0.78□□□□□ -2.28
SMCO4Q9NRQ5 RNA5SP190-201ENST00000365222 118 ntBASIC0.78□□□□□ -2.28
SMCO4Q9NRQ5 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
SMCO4Q9NRQ5 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC0.78□□□□□ -2.28
SMCO4Q9NRQ5 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC0.78□□□□□ -2.28
SMCO4Q9NRQ5 USP9YP35-201ENST00000435696 412 ntBASIC0.78□□□□□ -2.28
SMCO4Q9NRQ5 ELOCP3-201ENST00000439303 348 ntBASIC0.78□□□□□ -2.28
SMCO4Q9NRQ5 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.78□□□□□ -2.28
SMCO4Q9NRQ5 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC0.78□□□□□ -2.28
SMCO4Q9NRQ5 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC0.78□□□□□ -2.28
SMCO4Q9NRQ5 NAP1L1P1-201ENST00000524793 1063 ntBASIC0.78□□□□□ -2.28
SMCO4Q9NRQ5 AC018630.1-201ENST00000541376 925 ntBASIC0.78□□□□□ -2.28
SMCO4Q9NRQ5 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC0.78□□□□□ -2.28
SMCO4Q9NRQ5 MED28P6-201ENST00000558776 231 ntBASIC0.78□□□□□ -2.28
SMCO4Q9NRQ5 MTCO2P22-201ENST00000603246 681 ntBASIC0.78□□□□□ -2.28
SMCO4Q9NRQ5 MIR208A-201ENST00000362287 71 ntBASIC0.77□□□□□ -2.29
SMCO4Q9NRQ5 RNU6-1249P-201ENST00000363237 111 ntBASIC0.77□□□□□ -2.29
SMCO4Q9NRQ5 Y_RNA.333-201ENST00000365274 102 ntBASIC0.77□□□□□ -2.29
SMCO4Q9NRQ5 SNORA70.7-201ENST00000384159 133 ntBASIC0.77□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms