Protein–RNA interactions for Protein: Q9H9C1

VIPAS39, Spermatogenesis-defective protein 39 homolog, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39Q9H9C1 AL049781.1-201ENST00000623195 3585 ntBASIC2.88□□□□□ -1.95
VIPAS39Q9H9C1 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
VIPAS39Q9H9C1 AC090740.1-201ENST00000623193 2262 ntBASIC2.88□□□□□ -1.95
VIPAS39Q9H9C1 RNA5SP124-201ENST00000362739 110 ntBASIC2.88□□□□□ -1.95
VIPAS39Q9H9C1 RNU6-223P-201ENST00000362830 107 ntBASIC2.88□□□□□ -1.95
VIPAS39Q9H9C1 RNU5A-8P-201ENST00000364102 114 ntBASIC2.88□□□□□ -1.95
VIPAS39Q9H9C1 SNORA62.3-201ENST00000365110 153 ntBASIC2.88□□□□□ -1.95
VIPAS39Q9H9C1 SNORD116-8-201ENST00000384365 95 ntBASIC2.88□□□□□ -1.95
VIPAS39Q9H9C1 RNY3P9-201ENST00000384727 106 ntBASIC2.88□□□□□ -1.95
VIPAS39Q9H9C1 RNU6ATAC34P-201ENST00000408879 121 ntBASIC2.88□□□□□ -1.95
VIPAS39Q9H9C1 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
VIPAS39Q9H9C1 NDUFB4P7-201ENST00000423198 363 ntBASIC2.88□□□□□ -1.95
VIPAS39Q9H9C1 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC2.88□□□□□ -1.95
VIPAS39Q9H9C1 AL356867.1-201ENST00000429623 299 ntBASIC2.88□□□□□ -1.95
VIPAS39Q9H9C1 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC2.88□□□□□ -1.95
VIPAS39Q9H9C1 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC2.88□□□□□ -1.95
VIPAS39Q9H9C1 RPS27AP8-201ENST00000452665 445 ntBASIC2.88□□□□□ -1.95
VIPAS39Q9H9C1 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC2.88□□□□□ -1.95
VIPAS39Q9H9C1 AC109486.1-201ENST00000486833 374 ntBASIC2.88□□□□□ -1.95
VIPAS39Q9H9C1 AC112204.1-201ENST00000502591 103 ntBASIC2.88□□□□□ -1.95
VIPAS39Q9H9C1 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC2.88□□□□□ -1.95
VIPAS39Q9H9C1 SCARNA15.2-201ENST00000516409 127 ntBASIC2.88□□□□□ -1.95
VIPAS39Q9H9C1 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.88□□□□□ -1.95
VIPAS39Q9H9C1 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC2.88□□□□□ -1.95
VIPAS39Q9H9C1 AC022616.6-201ENST00000520479 119 ntBASIC2.88□□□□□ -1.95
VIPAS39Q9H9C1 MTND2P38-201ENST00000522536 667 ntBASIC2.88□□□□□ -1.95
VIPAS39Q9H9C1 AP003181.2-201ENST00000528941 181 ntBASIC2.88□□□□□ -1.95
VIPAS39Q9H9C1 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC2.88□□□□□ -1.95
VIPAS39Q9H9C1 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC2.88□□□□□ -1.95
VIPAS39Q9H9C1 AC124947.2-202ENST00000552735 133 ntBASIC2.88□□□□□ -1.95
VIPAS39Q9H9C1 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
VIPAS39Q9H9C1 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.88□□□□□ -1.95
VIPAS39Q9H9C1 AC012065.4-201ENST00000602445 679 ntBASIC2.88□□□□□ -1.95
VIPAS39Q9H9C1 U73023.1-201ENST00000603134 700 ntBASIC2.88□□□□□ -1.95
VIPAS39Q9H9C1 DPPA3P3-201ENST00000603842 430 ntBASIC2.88□□□□□ -1.95
VIPAS39Q9H9C1 AL355365.1-201ENST00000616480 294 ntBASIC2.88□□□□□ -1.95
VIPAS39Q9H9C1 AC090617.7-201ENST00000623952 126 ntBASIC2.88□□□□□ -1.95
VIPAS39Q9H9C1 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.88□□□□□ -1.95
VIPAS39Q9H9C1 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
VIPAS39Q9H9C1 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC2.88□□□□□ -1.95
VIPAS39Q9H9C1 ZNF271P-202ENST00000465539 1970 ntBASIC2.87□□□□□ -1.95
VIPAS39Q9H9C1 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.87□□□□□ -1.95
VIPAS39Q9H9C1 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.87□□□□□ -1.95
VIPAS39Q9H9C1 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
VIPAS39Q9H9C1 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
VIPAS39Q9H9C1 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
VIPAS39Q9H9C1 RNY4P24-201ENST00000362735 96 ntBASIC2.87□□□□□ -1.95
VIPAS39Q9H9C1 RNY3P13-201ENST00000365542 102 ntBASIC2.87□□□□□ -1.95
VIPAS39Q9H9C1 RNU5A-2P-201ENST00000384337 116 ntBASIC2.87□□□□□ -1.95
VIPAS39Q9H9C1 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
VIPAS39Q9H9C1 RNA5SP252-201ENST00000391131 119 ntBASIC2.87□□□□□ -1.95
VIPAS39Q9H9C1 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
VIPAS39Q9H9C1 RPL19P1-201ENST00000411635 428 ntBASIC2.87□□□□□ -1.95
VIPAS39Q9H9C1 HMGN2P35-201ENST00000412164 270 ntBASIC2.87□□□□□ -1.95
VIPAS39Q9H9C1 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC2.87□□□□□ -1.95
VIPAS39Q9H9C1 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.87□□□□□ -1.95
VIPAS39Q9H9C1 NPM1P11-201ENST00000417106 855 ntBASIC2.87□□□□□ -1.95
VIPAS39Q9H9C1 AC009518.2-201ENST00000418056 731 ntBASIC2.87□□□□□ -1.95
VIPAS39Q9H9C1 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.87□□□□□ -1.95
VIPAS39Q9H9C1 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC2.87□□□□□ -1.95
VIPAS39Q9H9C1 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC2.87□□□□□ -1.95
VIPAS39Q9H9C1 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC2.87□□□□□ -1.95
VIPAS39Q9H9C1 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC2.87□□□□□ -1.95
VIPAS39Q9H9C1 TAAR7P-201ENST00000436141 242 ntBASIC2.87□□□□□ -1.95
VIPAS39Q9H9C1 AC005019.1-201ENST00000436455 431 ntBASIC2.87□□□□□ -1.95
VIPAS39Q9H9C1 AC005094.1-201ENST00000440420 368 ntBASIC2.87□□□□□ -1.95
VIPAS39Q9H9C1 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
VIPAS39Q9H9C1 AL590664.1-201ENST00000448065 339 ntBASIC2.87□□□□□ -1.95
VIPAS39Q9H9C1 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.87□□□□□ -1.95
VIPAS39Q9H9C1 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC2.87□□□□□ -1.95
VIPAS39Q9H9C1 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC2.87□□□□□ -1.95
VIPAS39Q9H9C1 FAM133DP-201ENST00000464802 691 ntBASIC2.87□□□□□ -1.95
VIPAS39Q9H9C1 RPL23AP41-201ENST00000484754 458 ntBASIC2.87□□□□□ -1.95
VIPAS39Q9H9C1 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC2.87□□□□□ -1.95
VIPAS39Q9H9C1 AC118465.1-201ENST00000513820 1271 ntBASIC2.87□□□□□ -1.95
VIPAS39Q9H9C1 SNORA31.1-201ENST00000515993 133 ntBASIC2.87□□□□□ -1.95
VIPAS39Q9H9C1 SNORA31.5-201ENST00000516190 133 ntBASIC2.87□□□□□ -1.95
VIPAS39Q9H9C1 RNU6-928P-201ENST00000516876 104 ntBASIC2.87□□□□□ -1.95
VIPAS39Q9H9C1 RNU6-56P-201ENST00000516986 93 ntBASIC2.87□□□□□ -1.95
VIPAS39Q9H9C1 NRON-201ENST00000517270 370 ntBASIC2.87□□□□□ -1.95
VIPAS39Q9H9C1 AC107934.1-201ENST00000522215 217 ntBASIC2.87□□□□□ -1.95
VIPAS39Q9H9C1 AC007115.1-201ENST00000546853 234 ntBASIC2.87□□□□□ -1.95
VIPAS39Q9H9C1 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
VIPAS39Q9H9C1 MIR3146-201ENST00000580367 79 ntBASIC2.87□□□□□ -1.95
VIPAS39Q9H9C1 AC002545.1-201ENST00000592511 181 ntBASIC2.87□□□□□ -1.95
VIPAS39Q9H9C1 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC2.87□□□□□ -1.95
VIPAS39Q9H9C1 AL109618.2-201ENST00000605527 211 ntBASIC2.87□□□□□ -1.95
VIPAS39Q9H9C1 OR2AS2P-201ENST00000606902 342 ntBASIC2.87□□□□□ -1.95
VIPAS39Q9H9C1 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC2.87□□□□□ -1.95
VIPAS39Q9H9C1 MIR4275-201ENST00000636486 87 ntBASIC2.87□□□□□ -1.95
VIPAS39Q9H9C1 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.87□□□□□ -1.95
VIPAS39Q9H9C1 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
VIPAS39Q9H9C1 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.86□□□□□ -1.95
VIPAS39Q9H9C1 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC2.86□□□□□ -1.95
VIPAS39Q9H9C1 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
VIPAS39Q9H9C1 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC2.86□□□□□ -1.95
VIPAS39Q9H9C1 MIR200C-201ENST00000384980 68 ntBASIC2.86□□□□□ -1.95
VIPAS39Q9H9C1 FCF1P10-201ENST00000407590 479 ntBASIC2.86□□□□□ -1.95
VIPAS39Q9H9C1 RNA5SP181-201ENST00000410246 98 ntBASIC2.86□□□□□ -1.95
VIPAS39Q9H9C1 RNU4-47P-201ENST00000410876 114 ntBASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 118 ms